Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:54:21 (448102): wrapper (7.7.26015): starting
13:54:21 (448102): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:54:21] Arguments: --nthreads 12
[2025-10-12 13:54:21] Threads: 12
[2025-10-12 13:54:21] Checking for CVMFS
[2025-10-12 13:54:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:54:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:54:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:54:22] 2.11.0.0 3299214 3148 86768 151621 0 188 5382797 6144000 14099 130560 0 61807976 100.000 111512 189 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 13:54:22] CVMFS is ok
[2025-10-12 13:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:54:22] Checking for apptainer binary...
[2025-10-12 13:54:22] apptainer is not installed, using version from CVMFS
[2025-10-12 13:54:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:54:22] radiat0r
[2025-10-12 13:54:22] apptainer works
[2025-10-12 13:54:22] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:54:22] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:54:22] Starting ATLAS job with PandaID=6839242779
[2025-10-12 13:54:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:46:48]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:46:48]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6839242779/log.46676269._069189.job.log.tgz.1
[2025-10-12 14:46:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/8e/log.46676269._069189.job.log.tgz.1
[2025-10-12 14:46:48]  workdir=None
[2025-10-12 14:46:48] ]
[2025-10-12 14:46:48] 2025-10-12 14:45:46,124 | INFO     | transferring file log.46676269._069189.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6839242779/log.46676269._069189.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 14:46:48] 2025-10-12 14:45:46,125 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6839242779/log.46676269._069189.job.log.tgz.1 /var/lib/boinc/slots/6/log.46676269._069189.job
[2025-10-12 14:46:48] 2025-10-12 14:45:46,153 | INFO     | adding to output.list: log.46676269._069189.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/8e/log.46676269._069189.job.log.tg
[2025-10-12 14:46:48] 2025-10-12 14:45:46,154 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:46:48] 2025-10-12 14:45:46,154 | INFO     | summary of transferred files:
[2025-10-12 14:46:48] 2025-10-12 14:45:46,154 | INFO     |  -- lfn=log.46676269._069189.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:46:48] 2025-10-12 14:45:46,155 | INFO     | stage-out finished correctly
[2025-10-12 14:46:48] 2025-10-12 14:45:46,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:46:48] 2025-10-12 14:45:46,710 | WARNING  | process 464401 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 14:46:48] 2025-10-12 14:45:46,711 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6839242779/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:46:48] 2025-10-12 14:45:47,520 | INFO     | number of running child processes to parent process 464401: 1
[2025-10-12 14:46:48] 2025-10-12 14:45:47,521 | INFO     | maximum number of monitored processes: 6
[2025-10-12 14:46:48] 2025-10-12 14:45:47,563 | INFO     | time since job start (3070s) is within the limit (172800.0s)
[2025-10-12 14:46:48] 2025-10-12 14:45:47,998 | INFO     | job 6839242779 has state=finished
[2025-10-12 14:46:48] 2025-10-12 14:45:47,999 | INFO     | preparing for final server update for job 6839242779 in state='finished'
[2025-10-12 14:46:48] 2025-10-12 14:45:47,999 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:46:48] 2025-10-12 14:45:47,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:46:48] 2025-10-12 14:45:47,999 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:46:48] 2025-10-12 14:45:47,999 | INFO     | job 6839242779 has finished - writing final server update
[2025-10-12 14:46:48] 2025-10-12 14:45:48,000 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:46:48] 2025-10-12 14:45:48,002 | INFO     | executing command: lscpu
[2025-10-12 14:46:48] 2025-10-12 14:45:48,200 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:46:48] 2025-10-12 14:45:49,567 | INFO     | time since job start (3072s) is within the limit (172800.0s)
[2025-10-12 14:46:48] 2025-10-12 14:45:50,025 | INFO     | monitor loop #214: job 0:6839242779 is in state 'finished'
[2025-10-12 14:46:48] 2025-10-12 14:45:50,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:46:48] 2025-10-12 14:45:51,571 | INFO     | time since job start (3074s) is within the limit (172800.0s)
[2025-10-12 14:46:48] 2025-10-12 14:45:52,526 | INFO     | monitor loop #215: job 0:6839242779 is in state 'finished'
[2025-10-12 14:46:48] 2025-10-12 14:45:52,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:46:48] 2025-10-12 14:45:53,577 | INFO     | time since job start (3076s) is within the limit (172800.0s)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,030 | INFO     | monitor loop #216: job 0:6839242779 is in state 'finished'
[2025-10-12 14:46:48] 2025-10-12 14:45:55,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,113 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:46:48] 2025-10-12 14:45:55,177 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2359.1020234375
[2025-10-12 14:46:48] 2025-10-12 14:45:55,264 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6839242779/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,265 | INFO     | extracted standard info from prmon json
[2025-10-12 14:46:48] 2025-10-12 14:45:55,265 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:46:48] 2025-10-12 14:45:55,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:46:48] 2025-10-12 14:45:55,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:46:48] 2025-10-12 14:45:55,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:46:48] 2025-10-12 14:45:55,267 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | sum of square deviations: 24640462.0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | sum of deviations: 416865948.0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | mean x: 1760278898.0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | mean y: 2658260.976744186
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | -- intersect: -29777640970.391773
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | intersect: -29777640970.391773
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | chi2: 0.00046977499093879197
[2025-10-12 14:46:48] 2025-10-12 14:45:55,268 | INFO     | -- intersect: -29777640970.391773
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | current memory leak: 16.92 B/s (using 43 data points, chi2=0.00)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | could have reported an average CPU frequency of 2349 MHz (5 samples)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | ..............................
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | . Timing measurements:
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | . get job = 0 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | . initial setup = 1 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | . payload setup = 8 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,269 | INFO     | . stage-in = 0 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,270 | INFO     | . payload execution = 3036 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,270 | INFO     | . stage-out = 1 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,270 | INFO     | . log creation = 0 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,270 | INFO     | ..............................
[2025-10-12 14:46:48] 2025-10-12 14:45:55,373 | INFO     | 
[2025-10-12 14:46:48] 2025-10-12 14:45:55,373 | INFO     | job summary report
[2025-10-12 14:46:48] 2025-10-12 14:45:55,373 | INFO     | --------------------------------------------------
[2025-10-12 14:46:48] 2025-10-12 14:45:55,373 | INFO     | PanDA job id: 6839242779
[2025-10-12 14:46:48] 2025-10-12 14:45:55,373 | INFO     | task id: 46676269
[2025-10-12 14:46:48] 2025-10-12 14:45:55,373 | INFO     | errors: (none)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | pilot state: finished 
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | transexitcode: 0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | exeerrorcode: 0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | exeerrordiag: 
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | exitcode: 0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | exitmsg: OK
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | cpuconsumptiontime: 32636 s
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | nevents: 400
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | neventsw: 0
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | pid: 464401
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | pgrp: 464401
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | corecount: 12
[2025-10-12 14:46:48] 2025-10-12 14:45:55,374 | INFO     | event service: False
[2025-10-12 14:46:48] 2025-10-12 14:45:55,375 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 3048: 2374592, 3050: 2383774, 3059: 2383944}
[2025-10-12 14:46:48] 2025-10-12 14:45:55,375 | INFO     | --------------------------------------------------
[2025-10-12 14:46:48] 2025-10-12 14:45:55,375 | INFO     | 
[2025-10-12 14:46:48] 2025-10-12 14:45:55,375 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-12 14:46:48] 2025-10-12 14:45:55,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:46:48] 2025-10-12 14:45:55,410 | INFO     | job 6839242779 has completed (purged errors)
[2025-10-12 14:46:48] 2025-10-12 14:45:55,410 | INFO     | overall cleanup function is called
[2025-10-12 14:46:48] 2025-10-12 14:45:56,420 | INFO     | --- collectZombieJob: --- 10, [464401]
[2025-10-12 14:46:48] 2025-10-12 14:45:56,421 | INFO     | zombie collector waiting for pid 464401
[2025-10-12 14:46:48] 2025-10-12 14:45:56,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:46:48] 2025-10-12 14:45:56,421 | INFO     | collected zombie processes
[2025-10-12 14:46:48] 2025-10-12 14:45:56,421 | INFO     | will attempt to kill all subprocesses of pid=464401
[2025-10-12 14:46:48] 2025-10-12 14:45:57,279 | INFO     | process IDs to be killed: [464401] (in reverse order)
[2025-10-12 14:46:48] 2025-10-12 14:45:57,554 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:46:48] 2025-10-12 14:45:57,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:46:48] 2025-10-12 14:45:57,582 | INFO     | did not find any defunct processes belonging to 464401
[2025-10-12 14:46:48] 2025-10-12 14:45:57,607 | INFO     | did not find any defunct processes belonging to 464401
[2025-10-12 14:46:48] 2025-10-12 14:45:57,608 | INFO     | ready for new job
[2025-10-12 14:46:48] 2025-10-12 14:45:57,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:46:48] 2025-10-12 14:45:57,611 | INFO     | ***************************************
[2025-10-12 14:46:48] 2025-10-12 14:45:57,611 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:46:48] 2025-10-12 14:45:57,611 | INFO     | ***************************************
[2025-10-12 14:46:48] 2025-10-12 14:45:57,611 | INFO     | 
[2025-10-12 14:46:48] 2025-10-12 14:45:57,649 | INFO     | architecture information:
[2025-10-12 14:46:48] 2025-10-12 14:45:57,650 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:46:48] 2025-10-12 14:45:57,674 | INFO     | cat /etc/os-release:
[2025-10-12 14:46:48] NAME="CentOS Linux"
[2025-10-12 14:46:48] VERSION="7 (Core)"
[2025-10-12 14:46:48] ID="centos"
[2025-10-12 14:46:48] ID_LIKE="rhel fedora"
[2025-10-12 14:46:48] VERSION_ID="7"
[2025-10-12 14:46:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:46:48] ANSI_COLOR="0;31"
[2025-10-12 14:46:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:46:48] HOME_URL="https://www.centos.org/"
[2025-10-12 14:46:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:46:48] 
[2025-10-12 14:46:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:46:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:46:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:46:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:46:48] 
[2025-10-12 14:46:48] 2025-10-12 14:45:57,674 | INFO     | ***************************************
[2025-10-12 14:46:48] 2025-10-12 14:45:58,177 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-12 14:46:48] 2025-10-12 14:45:58,210 | INFO     | sufficient remaining disk space (1725007134720 B)
[2025-10-12 14:46:48] 2025-10-12 14:45:58,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:46:48] 2025-10-12 14:45:58,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:46:48] 2025-10-12 14:45:58,211 | INFO     | update_server=False
[2025-10-12 14:46:48] 2025-10-12 14:45:58,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:46:48] 2025-10-12 14:45:58,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:46:48] 2025-10-12 14:45:58,540 | INFO     | aborting loop
[2025-10-12 14:46:48] 2025-10-12 14:45:58,764 | INFO     | all payload control threads have been joined
[2025-10-12 14:46:48] 2025-10-12 14:45:58,858 | INFO     | all data control threads have been joined
[2025-10-12 14:46:48] 2025-10-12 14:45:59,216 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:45:59,234 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:45:59,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:46:48] 2025-10-12 14:45:59,310 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:45:59,334 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:45:59,374 | INFO     | all job control threads have been joined
[2025-10-12 14:46:48] 2025-10-12 14:45:59,545 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:45:59,770 | INFO     | [payload] control thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:45:59,863 | INFO     | [data] control thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:00,334 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:00,340 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:00,380 | INFO     | [job] control thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:00,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:46:48] 2025-10-12 14:46:00,515 | INFO     | [job] validate thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:00,746 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:01,276 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:01,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:46:48] 2025-10-12 14:46:01,390 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:05,365 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:08,281 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:46:48] 2025-10-12 14:46:09,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:46:48] 2025-10-12 14:46:27,680 | INFO     | PID=456238 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:46:48] 2025-10-12 14:46:27,680 | INFO     | .. there are 16 such processes running
[2025-10-12 14:46:48] 2025-10-12 14:46:27,682 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:46:48] 2025-10-12 14:46:27,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:46:48] 2025-10-12 14:46:27,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:46:48] 2025-10-12 14:46:41,885 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:46:48] 2025-10-12 14:46:42,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567061780288)>', '<ExcThread(monitor, started 140566352357120)>']
[2025-10-12 14:46:48] 2025-10-12 14:46:43,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:46:48] 2025-10-12 14:46:43,761 | INFO     | [monitor] control thread has ended
[2025-10-12 14:46:48] 2025-10-12 14:46:47,802 | INFO     | all workflow threads have been joined
[2025-10-12 14:46:48] 2025-10-12 14:46:47,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:46:48] 2025-10-12 14:46:47,803 | INFO     | traces error code: 0
[2025-10-12 14:46:48] 2025-10-12 14:46:47,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:46:48] 2025-10-12 14:46:48,030 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:46:48] 2025-10-12 14:46:48,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:46:48] 2025-10-12 14:46:48,039 [wrapper] pilotpid: 456238
[2025-10-12 14:46:48] 2025-10-12 14:46:48,042 [wrapper] Pilot exit status: 0
[2025-10-12 14:46:48] 2025-10-12 14:46:48,055 [wrapper] pandaids: 6839242779
[2025-10-12 14:46:48] 2025-10-12 14:46:48,228 [wrapper] cleanup supervisor_pilot  838074 456239
[2025-10-12 14:46:48] 2025-10-12 14:46:48,233 [wrapper] Test setup, not cleaning
[2025-10-12 14:46:48] 2025-10-12 14:46:48,237 [wrapper] apfmon messages muted
[2025-10-12 14:46:48] 2025-10-12 14:46:48,241 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:46:48] 2025-10-12 14:46:48,245 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:46:48]  *** Error codes and diagnostics ***
[2025-10-12 14:46:48]     "exeErrorCode": 0,
[2025-10-12 14:46:48]     "exeErrorDiag": "",
[2025-10-12 14:46:48]     "pilotErrorCode": 0,
[2025-10-12 14:46:48]     "pilotErrorDiag": "",
[2025-10-12 14:46:48]  *** Listing of results directory ***
[2025-10-12 14:46:48] total 413532
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc    557409 Oct 12 01:53 pilot3.tar.gz
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:14 queuedata.json
[2025-10-12 14:46:48] -rwx------ 1 boinc boinc     36292 Oct 12 02:15 runpilot2-wrapper.sh
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:46:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:54 run_atlas
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:54 job.xml
[2025-10-12 14:46:48] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:54 start_atlas.sh
[2025-10-12 14:46:48] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:54 shared
[2025-10-12 14:46:48] -rw-r--r-- 2 boinc boinc    569681 Oct 12 13:54 input.tar.gz
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc      9395 Oct 12 13:54 init_data.xml
[2025-10-12 14:46:48] -rw-r--r-- 2 boinc boinc 222636997 Oct 12 13:54 EVNT.46676267._003178.pool.root.1
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:54 boinc_setup_complete
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:54 boinc_lockfile
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc      2550 Oct 12 13:54 pandaJob.out
[2025-10-12 14:46:48] -rw------- 1 boinc boinc    975528 Oct 12 13:54 agis_schedconf.cvmfs.json
[2025-10-12 14:46:48] -rw------- 1 boinc boinc   1560580 Oct 12 13:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:46:48] drwx------ 5 boinc boinc      4096 Oct 12 13:54 pilot3
[2025-10-12 14:46:48] -rw------- 1 boinc boinc 195268590 Oct 12 14:45 HITS.46676269._069189.pool.root.1
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:45 boinc_task_state.xml
[2025-10-12 14:46:48] -rw------- 1 boinc boinc      1041 Oct 12 14:45 memory_monitor_summary.json
[2025-10-12 14:46:48] -rw------- 1 boinc boinc    367715 Oct 12 14:45 log.46676269._069189.job.log.tgz.1
[2025-10-12 14:46:48] -rw------- 1 boinc boinc      7747 Oct 12 14:45 heartbeat.json
[2025-10-12 14:46:48] -rw------- 1 boinc boinc        95 Oct 12 14:46 pilot_heartbeat.json
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:46 boinc_mmap_file
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:46 wrapper_checkpoint.txt
[2025-10-12 14:46:48] -rw------- 1 boinc boinc      4898 Oct 12 14:46 pilotlog.txt
[2025-10-12 14:46:48] -rw------- 1 boinc boinc    456191 Oct 12 14:46 log.46676269._069189.job.log.1
[2025-10-12 14:46:48] -rw------- 1 boinc boinc       357 Oct 12 14:46 output.list
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:46 runtime_log
[2025-10-12 14:46:48] -rw------- 1 boinc boinc    839680 Oct 12 14:46 result.tar.gz
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc      8658 Oct 12 14:46 runtime_log.err
[2025-10-12 14:46:48] -rw------- 1 boinc boinc       643 Oct 12 14:46 AAJLDm7m0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqJiNDmTMtAmm.diag
[2025-10-12 14:46:48] -rw-r--r-- 1 boinc boinc     21967 Oct 12 14:46 stderr.txt
[2025-10-12 14:46:48] HITS file was successfully produced:
[2025-10-12 14:46:48] -rw------- 1 boinc boinc 195268590 Oct 12 14:45 shared/HITS.pool.root.1
[2025-10-12 14:46:48]  *** Contents of shared directory: ***
[2025-10-12 14:46:48] total 409516
[2025-10-12 14:46:48] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:54 start_atlas.sh
[2025-10-12 14:46:48] -rw-r--r-- 2 boinc boinc    569681 Oct 12 13:54 input.tar.gz
[2025-10-12 14:46:48] -rw-r--r-- 2 boinc boinc 222636997 Oct 12 13:54 ATLAS.root_0
[2025-10-12 14:46:48] -rw------- 1 boinc boinc 195268590 Oct 12 14:45 HITS.pool.root.1
[2025-10-12 14:46:48] -rw------- 1 boinc boinc    839680 Oct 12 14:46 result.tar.gz
14:46:50 (448102): run_atlas exited; CPU time 32830.420006
14:46:50 (448102): called boinc_finish(0)

</stderr_txt>
]]>

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