Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
12:02:24 (3829265): wrapper (7.7.26015): starting
12:02:24 (3829265): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 12:02:24] Arguments: --nthreads 4
[2025-10-12 12:02:24] Threads: 4
[2025-10-12 12:02:24] Checking for CVMFS
[2025-10-12 12:02:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:02:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:02:24] 2.12.7.0 2326568 4773 60632 151630 2 57 3703656 4096001 917 130560 0 6363376 99.985 161599 416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 12:02:24] CVMFS is ok
[2025-10-12 12:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:02:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 12:02:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 12:02:24] Further information can be found at the LHC@home message board.
[2025-10-12 12:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:02:24] Checking for apptainer binary...
[2025-10-12 12:02:24] apptainer is not installed, using version from CVMFS
[2025-10-12 12:02:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:02:24] X570UD
[2025-10-12 12:02:24] apptainer works
[2025-10-12 12:02:24] Set ATHENA_PROC_NUMBER=4
[2025-10-12 12:02:24] Set ATHENA_CORE_NUMBER=4
[2025-10-12 12:02:24] Starting ATLAS job with PandaID=6839869947
[2025-10-12 12:02:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:45:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:45:01] 2025-10-12 19:44:27,417 | INFO     | time since job start (6107s) is within the limit (172800.0s)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,043 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:45:01] 2025-10-12 19:44:28,045 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4283.58359375
[2025-10-12 13:45:01] 2025-10-12 19:44:28,048 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6839869947/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,048 | INFO     | extracted standard info from prmon json
[2025-10-12 13:45:01] 2025-10-12 19:44:28,048 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:45:01] 2025-10-12 19:44:28,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:45:01] 2025-10-12 19:44:28,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:45:01] 2025-10-12 19:44:28,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | sum of deviations: 10097314810.999998
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | mean x: 1760295206.5
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | mean y: 2314641.04
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | -- intersect: -57324315179.66768
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | intersect: -57324315179.66768
[2025-10-12 13:45:01] 2025-10-12 19:44:28,050 | INFO     | chi2: 1.3487888141932782
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | sum of deviations: 9523494277.000004
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | mean x: 1760295054.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | mean y: 2312660.6315789474
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | -- intersect: -63061566002.5248
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | intersect: -63061566002.5248
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | chi2: 1.3518374644558202
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | current chi2=1.3518374644558202 (change=-0.22602873262745712 %)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | right removable region: 94
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | sum of deviations: -1699510020.0000002
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | mean x: 1760295359.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,051 | INFO     | mean y: 2354092.5263157897
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | -- intersect: 11256386398.42428
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | intersect: 11256386398.42428
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | chi2: 0.004965461378132186
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | current chi2=0.004965461378132186 (change=99.63185775816935 %)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | sum of deviations: -1604312505.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | mean x: 1760295511.5
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | mean y: 2353719.688888889
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | -- intersect: 12496949709.892054
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | intersect: 12496949709.892054
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | chi2: 0.0048012305339811745
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | current chi2=0.0048012305339811745 (change=3.3074639322396453 %)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | left removable region: 20
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | sum of square deviations: 125630262.5
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | sum of deviations: -1036461553.0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,052 | INFO     | mean x: 1760295633.5
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | mean y: 2350926.4864864866
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | -- intersect: 14524956465.391008
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | intersect: 14524956465.391008
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | chi2: 0.004352025558710432
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | -- intersect: 14524956465.391008
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | current memory leak: -8.25 B/s (using 74 data points, chi2=0.00)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | could have reported an average CPU frequency of 4236 MHz (7 samples)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | ..............................
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . Timing measurements:
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . get job = 0 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . initial setup = 4 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . payload setup = 7 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . stage-in = 0 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . payload execution = 6073 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . stage-out = 0 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | . log creation = 0 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,053 | INFO     | ..............................
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | 
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | job summary report
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | --------------------------------------------------
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | PanDA job id: 6839869947
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | task id: 46676269
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | errors: (none)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | pilot state: finished 
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | transexitcode: 0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | exeerrorcode: 0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | exeerrordiag: 
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | exitcode: 0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | exitmsg: OK
[2025-10-12 13:45:01] 2025-10-12 19:44:28,225 | INFO     | cpuconsumptiontime: 23438 s
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | nevents: 400
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | neventsw: 0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | pid: 3840208
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | pgrp: 3840208
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | corecount: 4
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | event service: False
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | sizes: {0: 2348858, 5: 2349120, 11: 2349176, 6081: 2375968, 6082: 2384968, 6084: 2385024, 6091: 2385346}
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | --------------------------------------------------
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | 
[2025-10-12 13:45:01] 2025-10-12 19:44:28,226 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | job 6839869947 has completed (purged errors)
[2025-10-12 13:45:01] 2025-10-12 19:44:28,273 | INFO     | overall cleanup function is called
[2025-10-12 13:45:01] 2025-10-12 19:44:29,279 | INFO     | --- collectZombieJob: --- 10, [3840208]
[2025-10-12 13:45:01] 2025-10-12 19:44:29,279 | INFO     | zombie collector waiting for pid 3840208
[2025-10-12 13:45:01] 2025-10-12 19:44:29,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:45:01] 2025-10-12 19:44:29,279 | INFO     | collected zombie processes
[2025-10-12 13:45:01] 2025-10-12 19:44:29,279 | INFO     | will attempt to kill all subprocesses of pid=3840208
[2025-10-12 13:45:01] 2025-10-12 19:44:29,390 | INFO     | process IDs to be killed: [3840208] (in reverse order)
[2025-10-12 13:45:01] 2025-10-12 19:44:29,437 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:45:01] 2025-10-12 19:44:29,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:45:01] 2025-10-12 19:44:29,441 | INFO     | did not find any defunct processes belonging to 3840208
[2025-10-12 13:45:01] 2025-10-12 19:44:29,444 | INFO     | did not find any defunct processes belonging to 3840208
[2025-10-12 13:45:01] 2025-10-12 19:44:29,444 | INFO     | ready for new job
[2025-10-12 13:45:01] 2025-10-12 19:44:29,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:45:01] 2025-10-12 19:44:29,445 | INFO     | ***************************************
[2025-10-12 13:45:01] 2025-10-12 19:44:29,445 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:45:01] 2025-10-12 19:44:29,445 | INFO     | ***************************************
[2025-10-12 13:45:01] 2025-10-12 19:44:29,445 | INFO     | 
[2025-10-12 13:45:01] 2025-10-12 19:44:29,447 | INFO     | architecture information:
[2025-10-12 13:45:01] 2025-10-12 19:44:29,447 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:45:01] 2025-10-12 19:44:29,461 | INFO     | cat /etc/os-release:
[2025-10-12 13:45:01] NAME="CentOS Linux"
[2025-10-12 13:45:01] VERSION="7 (Core)"
[2025-10-12 13:45:01] ID="centos"
[2025-10-12 13:45:01] ID_LIKE="rhel fedora"
[2025-10-12 13:45:01] VERSION_ID="7"
[2025-10-12 13:45:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:45:01] ANSI_COLOR="0;31"
[2025-10-12 13:45:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:45:01] HOME_URL="https://www.centos.org/"
[2025-10-12 13:45:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:45:01] 
[2025-10-12 13:45:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:45:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:45:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:45:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:45:01] 
[2025-10-12 13:45:01] 2025-10-12 19:44:29,461 | INFO     | ***************************************
[2025-10-12 13:45:01] 2025-10-12 19:44:29,964 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-10-12 13:45:01] 2025-10-12 19:44:29,997 | INFO     | sufficient remaining disk space (252584132608 B)
[2025-10-12 13:45:01] 2025-10-12 19:44:29,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:45:01] 2025-10-12 19:44:29,998 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:45:01] 2025-10-12 19:44:29,998 | INFO     | update_server=False
[2025-10-12 13:45:01] 2025-10-12 19:44:29,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:45:01] 2025-10-12 19:44:29,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:45:01] 2025-10-12 19:44:29,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:45:01] 2025-10-12 19:44:30,199 | INFO     | all payload control threads have been joined
[2025-10-12 13:45:01] 2025-10-12 19:44:30,232 | INFO     | all data control threads have been joined
[2025-10-12 13:45:01] 2025-10-12 19:44:30,245 | INFO     | all job control threads have been joined
[2025-10-12 13:45:01] 2025-10-12 19:44:30,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:45:01] 2025-10-12 19:44:30,737 | INFO     | aborting loop
[2025-10-12 13:45:01] 2025-10-12 19:44:31,003 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,003 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:45:01] 2025-10-12 19:44:31,157 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,202 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,204 | INFO     | [payload] control thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,208 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,237 | INFO     | [data] control thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,250 | INFO     | [job] control thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,742 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:31,842 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:32,003 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:32,115 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:32,287 | INFO     | [job] validate thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:32,486 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:35,098 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:40,998 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:45:01] 2025-10-12 19:44:42,003 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:45:01] 2025-10-12 19:44:49,873 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:45:01] 2025-10-12 19:44:51,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135418537166656)>', '<ExcThread(monitor, started 135418263607040)>']
[2025-10-12 13:45:01] 2025-10-12 19:44:56,735 | INFO     | all workflow threads have been joined
[2025-10-12 13:45:01] 2025-10-12 19:44:56,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:45:01] 2025-10-12 19:44:56,735 | INFO     | traces error code: 0
[2025-10-12 13:45:01] 2025-10-12 19:44:56,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:45:01] 2025-10-12 19:45:00,609 | INFO     | PID=3833232 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:45:01] 2025-10-12 19:45:00,609 | INFO     | .. there are 2 such processes running
[2025-10-12 13:45:01] 2025-10-12 19:45:00,610 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:45:01] 2025-10-12 19:45:00,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:45:01] 2025-10-12 19:45:00,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:45:01] 2025-10-12 19:45:00,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:45:01] 2025-10-12 19:45:00,610 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 13:45:01] 2025-10-12 19:45:00,610 | INFO     | [monitor] control thread has ended
[2025-10-12 13:45:01] 2025-10-12 19:45:00,737 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:45:01] 2025-10-12 19:45:00,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:45:01] 2025-10-12 19:45:00,744 [wrapper] pilotpid: 3833232
[2025-10-12 13:45:01] 2025-10-12 19:45:00,747 [wrapper] Pilot exit status: 0
[2025-10-12 13:45:01] 2025-10-12 19:45:00,768 [wrapper] pandaids: 6839869947
[2025-10-12 13:45:01] 2025-10-12 19:45:00,853 [wrapper] cleanup supervisor_pilot 3937494 3833233
[2025-10-12 13:45:01] 2025-10-12 19:45:00,864 [wrapper] Test setup, not cleaning
[2025-10-12 13:45:01] 2025-10-12 19:45:00,866 [wrapper] apfmon messages muted
[2025-10-12 13:45:01] 2025-10-12 19:45:00,869 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:45:01] 2025-10-12 19:45:00,882 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:45:01]  *** Error codes and diagnostics ***
[2025-10-12 13:45:01]     "exeErrorCode": 0,
[2025-10-12 13:45:01]     "exeErrorDiag": "",
[2025-10-12 13:45:01]     "pilotErrorCode": 0,
[2025-10-12 13:45:01]     "pilotErrorDiag": "",
[2025-10-12 13:45:01]  *** Listing of results directory ***
[2025-10-12 13:45:01] total 408456
[2025-10-12 13:45:01] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:57 pilot3.tar.gz
[2025-10-12 13:45:01] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:15 queuedata.json
[2025-10-12 13:45:01] -rwx------ 1 boinc boinc     36292 Oct 12 05:15 runpilot2-wrapper.sh
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc       100 Oct 12 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:45:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:02 run_atlas
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc       105 Oct 12 12:02 job.xml
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc      9738 Oct 12 12:02 init_data.xml
[2025-10-12 13:45:01] -rw-r--r-- 2 boinc boinc 221500028 Oct 12 12:02 EVNT.46676267._003670.pool.root.1
[2025-10-12 13:45:01] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:02 start_atlas.sh
[2025-10-12 13:45:01] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:02 shared
[2025-10-12 13:45:01] -rw-r--r-- 2 boinc boinc    569679 Oct 12 12:02 input.tar.gz
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc         0 Oct 12 12:02 boinc_lockfile
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 12:02 pandaJob.out
[2025-10-12 13:45:01] -rw------- 1 boinc boinc    975528 Oct 12 12:02 agis_schedconf.cvmfs.json
[2025-10-12 13:45:01] -rw------- 1 boinc boinc   1560580 Oct 12 12:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:45:01] drwx------ 5 boinc boinc      4096 Oct 12 12:02 pilot3
[2025-10-12 13:45:01] -rw------- 1 boinc boinc 190476690 Oct 12 13:43 HITS.46676269._076921.pool.root.1
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc       530 Oct 12 13:44 boinc_task_state.xml
[2025-10-12 13:45:01] -rw------- 1 boinc boinc      1027 Oct 12 13:44 memory_monitor_summary.json
[2025-10-12 13:45:01] -rw------- 1 boinc boinc    282036 Oct 12 13:44 log.46676269._076921.job.log.tgz.1
[2025-10-12 13:45:01] -rw------- 1 boinc boinc      7749 Oct 12 13:44 heartbeat.json
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 13:44 boinc_mmap_file
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc        27 Oct 12 13:44 wrapper_checkpoint.txt
[2025-10-12 13:45:01] -rw------- 1 boinc boinc       892 Oct 12 13:45 pilotlog.txt
[2025-10-12 13:45:01] -rw------- 1 boinc boinc        95 Oct 12 13:45 pilot_heartbeat.json
[2025-10-12 13:45:01] -rw------- 1 boinc boinc    903260 Oct 12 13:45 log.46676269._076921.job.log.1
[2025-10-12 13:45:01] -rw------- 1 boinc boinc       357 Oct 12 13:45 output.list
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc       620 Oct 12 13:45 runtime_log
[2025-10-12 13:45:01] -rw------- 1 boinc boinc   1208320 Oct 12 13:45 result.tar.gz
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc      8699 Oct 12 13:45 runtime_log.err
[2025-10-12 13:45:01] -rw------- 1 boinc boinc       657 Oct 12 13:45 BjjLDm5D9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5bjNDmjrPDUo.diag
[2025-10-12 13:45:01] -rw-rw-r-- 1 boinc boinc     21236 Oct 12 13:45 stderr.txt
[2025-10-12 13:45:01] HITS file was successfully produced:
[2025-10-12 13:45:01] -rw------- 1 boinc boinc 190476690 Oct 12 13:43 shared/HITS.pool.root.1
[2025-10-12 13:45:01]  *** Contents of shared directory: ***
[2025-10-12 13:45:01] total 404092
[2025-10-12 13:45:01] -rw-r--r-- 2 boinc boinc 221500028 Oct 12 12:02 ATLAS.root_0
[2025-10-12 13:45:01] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:02 start_atlas.sh
[2025-10-12 13:45:01] -rw-r--r-- 2 boinc boinc    569679 Oct 12 12:02 input.tar.gz
[2025-10-12 13:45:01] -rw------- 1 boinc boinc 190476690 Oct 12 13:43 HITS.pool.root.1
[2025-10-12 13:45:01] -rw------- 1 boinc boinc   1208320 Oct 12 13:45 result.tar.gz
13:45:02 (3829265): run_atlas exited; CPU time 23474.262867
13:45:02 (3829265): called boinc_finish(0)

</stderr_txt>
]]>

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