Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:47 (21578): wrapper (7.7.26015): starting
08:47:47 (21578): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:47:47] Arguments: --nthreads 12
[2025-10-12 08:47:47] Threads: 12
[2025-10-12 08:47:47] Checking for CVMFS
[2025-10-12 08:47:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:47:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:47:47] 2.11.2.0 2979 222901 105036 151620 0 59 15429195 20275200 1 130560 2 108608171 99.984 13042463 12008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:47:47] CVMFS is ok
[2025-10-12 08:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:47:47] Further information can be found at the LHC@home message board.
[2025-10-12 08:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:47:47] Checking for apptainer binary...
[2025-10-12 08:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:47:47] Running /usr/bin/apptainer --version
[2025-10-12 08:47:47] apptainer version 1.3.2-1.el7
[2025-10-12 08:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:47:48] c-205-7.aglt2.org
[2025-10-12 08:47:48] apptainer works
[2025-10-12 08:47:48] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:47:48] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:47:48] Starting ATLAS job with PandaID=6839869893
[2025-10-12 08:47:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:01:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:01:16]  replicas=None
[2025-10-12 10:01:16]  scope=mc23_13p6TeV
[2025-10-12 10:01:16]  status=None
[2025-10-12 10:01:16]  status_code=0
[2025-10-12 10:01:16]  storage_token=
[2025-10-12 10:01:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839869893/log.46676269._076867.job.log.tgz.1
[2025-10-12 10:01:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/60/log.46676269._076867.job.log.tgz.1
[2025-10-12 10:01:16]  workdir=None
[2025-10-12 10:01:16] ]
[2025-10-12 10:01:16] 2025-10-12 14:00:34,980 | INFO     | transferring file log.46676269._076867.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839869893/log.46676269._076867.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:01:16] 2025-10-12 14:00:34,980 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839869893/log.46676269._076867.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._076867.job
[2025-10-12 10:01:16] 2025-10-12 14:00:35,001 | INFO     | adding to output.list: log.46676269._076867.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/60/log.46676269._076867.job.log.tg
[2025-10-12 10:01:16] 2025-10-12 14:00:35,002 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:01:16] 2025-10-12 14:00:35,002 | INFO     | summary of transferred files:
[2025-10-12 10:01:16] 2025-10-12 14:00:35,003 | INFO     |  -- lfn=log.46676269._076867.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:01:16] 2025-10-12 14:00:35,003 | INFO     | stage-out finished correctly
[2025-10-12 10:01:16] 2025-10-12 14:00:35,800 | INFO     | monitor loop #323: job 0:6839869893 is in state 'finished'
[2025-10-12 10:01:16] 2025-10-12 14:00:35,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:01:16] 2025-10-12 14:00:35,868 | INFO     | time since job start (4351s) is within the limit (172800.0s)
[2025-10-12 10:01:16] 2025-10-12 14:00:37,876 | INFO     | time since job start (4353s) is within the limit (172800.0s)
[2025-10-12 10:01:16] 2025-10-12 14:00:38,282 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:01:16] 2025-10-12 14:00:38,312 | INFO     | monitor loop #324: job 0:6839869893 is in state 'finished'
[2025-10-12 10:01:16] 2025-10-12 14:00:38,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:01:16] 2025-10-12 14:00:38,379 | INFO     | job 6839869893 has state=finished
[2025-10-12 10:01:16] 2025-10-12 14:00:38,380 | INFO     | preparing for final server update for job 6839869893 in state='finished'
[2025-10-12 10:01:16] 2025-10-12 14:00:38,381 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:01:16] 2025-10-12 14:00:38,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:01:16] 2025-10-12 14:00:38,381 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:01:16] 2025-10-12 14:00:38,381 | INFO     | job 6839869893 has finished - writing final server update
[2025-10-12 10:01:16] 2025-10-12 14:00:38,382 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:01:16] 2025-10-12 14:00:38,383 | INFO     | executing command: lscpu
[2025-10-12 10:01:16] 2025-10-12 14:00:38,408 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:01:16] 2025-10-12 14:00:39,882 | INFO     | time since job start (4355s) is within the limit (172800.0s)
[2025-10-12 10:01:16] 2025-10-12 14:00:40,825 | INFO     | monitor loop #325: job 0:6839869893 is in state 'finished'
[2025-10-12 10:01:16] 2025-10-12 14:00:40,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:01:16] 2025-10-12 14:00:41,888 | INFO     | time since job start (4357s) is within the limit (172800.0s)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,126 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:01:16] 2025-10-12 14:00:43,129 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-12 10:01:16] 2025-10-12 14:00:43,131 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839869893/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,131 | INFO     | extracted standard info from prmon json
[2025-10-12 10:01:16] 2025-10-12 14:00:43,131 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:01:16] 2025-10-12 14:00:43,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:01:16] 2025-10-12 14:00:43,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:01:16] 2025-10-12 14:00:43,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:01:16] 2025-10-12 14:00:43,134 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:01:16] 2025-10-12 14:00:43,134 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,134 | INFO     | sum of deviations: -6273026500.0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,134 | INFO     | mean x: 1760275539.5
[2025-10-12 10:01:16] 2025-10-12 14:00:43,134 | INFO     | mean y: 2759394.125
[2025-10-12 10:01:16] 2025-10-12 14:00:43,135 | INFO     | -- intersect: 135879610050.00664
[2025-10-12 10:01:16] 2025-10-12 14:00:43,135 | INFO     | intersect: 135879610050.00664
[2025-10-12 10:01:16] 2025-10-12 14:00:43,135 | INFO     | chi2: 0.07982619489807385
[2025-10-12 10:01:16] 2025-10-12 14:00:43,135 | INFO     | -- intersect: 135879610050.00664
[2025-10-12 10:01:16] 2025-10-12 14:00:43,135 | INFO     | current memory leak: -77.19 B/s (using 64 data points, chi2=0.08)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,135 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | ..............................
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . Timing measurements:
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . get job = 0 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . initial setup = 2 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . payload setup = 7 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . stage-in = 0 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . payload execution = 4322 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . stage-out = 0 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,136 | INFO     | . log creation = 0 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,137 | INFO     | ..............................
[2025-10-12 10:01:16] 2025-10-12 14:00:43,219 | INFO     | 
[2025-10-12 10:01:16] 2025-10-12 14:00:43,219 | INFO     | job summary report
[2025-10-12 10:01:16] 2025-10-12 14:00:43,219 | INFO     | --------------------------------------------------
[2025-10-12 10:01:16] 2025-10-12 14:00:43,219 | INFO     | PanDA job id: 6839869893
[2025-10-12 10:01:16] 2025-10-12 14:00:43,219 | INFO     | task id: 46676269
[2025-10-12 10:01:16] 2025-10-12 14:00:43,219 | INFO     | errors: (none)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:01:16] 2025-10-12 14:00:43,220 | INFO     | pilot state: finished 
[2025-10-12 10:01:16] 2025-10-12 14:00:43,220 | INFO     | transexitcode: 0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,220 | INFO     | exeerrorcode: 0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,220 | INFO     | exeerrordiag: 
[2025-10-12 10:01:16] 2025-10-12 14:00:43,220 | INFO     | exitcode: 0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,221 | INFO     | exitmsg: OK
[2025-10-12 10:01:16] 2025-10-12 14:00:43,221 | INFO     | cpuconsumptiontime: 45829 s
[2025-10-12 10:01:16] 2025-10-12 14:00:43,221 | INFO     | nevents: 400
[2025-10-12 10:01:16] 2025-10-12 14:00:43,221 | INFO     | neventsw: 0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,221 | INFO     | pid: 31684
[2025-10-12 10:01:16] 2025-10-12 14:00:43,221 | INFO     | pgrp: 31684
[2025-10-12 10:01:16] 2025-10-12 14:00:43,222 | INFO     | corecount: 12
[2025-10-12 10:01:16] 2025-10-12 14:00:43,222 | INFO     | event service: False
[2025-10-12 10:01:16] 2025-10-12 14:00:43,222 | INFO     | sizes: {0: 2348628, 1: 2348883, 6: 2349145, 12: 2349173, 4333: 2375193, 4334: 2375220, 4335: 2384402, 4338: 2384458, 4343: 2384652}
[2025-10-12 10:01:16] 2025-10-12 14:00:43,222 | INFO     | --------------------------------------------------
[2025-10-12 10:01:16] 2025-10-12 14:00:43,222 | INFO     | 
[2025-10-12 10:01:16] 2025-10-12 14:00:43,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:01:16] 2025-10-12 14:00:43,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,250 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:01:16] 2025-10-12 14:00:43,250 | INFO     | job 6839869893 has completed (purged errors)
[2025-10-12 10:01:16] 2025-10-12 14:00:43,251 | INFO     | overall cleanup function is called
[2025-10-12 10:01:16] 2025-10-12 14:00:44,259 | INFO     | --- collectZombieJob: --- 10, [31684]
[2025-10-12 10:01:16] 2025-10-12 14:00:44,259 | INFO     | zombie collector waiting for pid 31684
[2025-10-12 10:01:16] 2025-10-12 14:00:44,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:01:16] 2025-10-12 14:00:44,275 | INFO     | collected zombie processes
[2025-10-12 10:01:16] 2025-10-12 14:00:44,275 | INFO     | will attempt to kill all subprocesses of pid=31684
[2025-10-12 10:01:16] 2025-10-12 14:00:44,365 | INFO     | process IDs to be killed: [31684] (in reverse order)
[2025-10-12 10:01:16] 2025-10-12 14:00:44,433 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:01:16] 2025-10-12 14:00:44,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:01:16] 2025-10-12 14:00:44,435 | INFO     | did not find any defunct processes belonging to 31684
[2025-10-12 10:01:16] 2025-10-12 14:00:44,438 | INFO     | did not find any defunct processes belonging to 31684
[2025-10-12 10:01:16] 2025-10-12 14:00:44,438 | INFO     | ready for new job
[2025-10-12 10:01:16] 2025-10-12 14:00:44,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:01:16] 2025-10-12 14:00:44,440 | INFO     | ***************************************
[2025-10-12 10:01:16] 2025-10-12 14:00:44,440 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:01:16] 2025-10-12 14:00:44,440 | INFO     | ***************************************
[2025-10-12 10:01:16] 2025-10-12 14:00:44,440 | INFO     | 
[2025-10-12 10:01:16] 2025-10-12 14:00:44,441 | INFO     | architecture information:
[2025-10-12 10:01:16] 2025-10-12 14:00:44,441 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:01:16] 2025-10-12 14:00:44,458 | INFO     | cat /etc/os-release:
[2025-10-12 10:01:16] NAME="CentOS Linux"
[2025-10-12 10:01:16] VERSION="7 (Core)"
[2025-10-12 10:01:16] ID="centos"
[2025-10-12 10:01:16] ID_LIKE="rhel fedora"
[2025-10-12 10:01:16] VERSION_ID="7"
[2025-10-12 10:01:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:01:16] ANSI_COLOR="0;31"
[2025-10-12 10:01:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:01:16] HOME_URL="https://www.centos.org/"
[2025-10-12 10:01:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:01:16] 
[2025-10-12 10:01:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:01:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:01:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:01:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:01:16] 
[2025-10-12 10:01:16] 2025-10-12 14:00:44,459 | INFO     | ***************************************
[2025-10-12 10:01:16] 2025-10-12 14:00:44,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:01:16] 2025-10-12 14:00:44,979 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-12 10:01:16] 2025-10-12 14:00:44,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:01:16] 2025-10-12 14:00:44,980 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:01:16] 2025-10-12 14:00:44,980 | INFO     | update_server=False
[2025-10-12 10:01:16] 2025-10-12 14:00:44,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:01:16] 2025-10-12 14:00:44,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:01:16] 2025-10-12 14:00:44,981 | INFO     | aborting loop
[2025-10-12 10:01:16] 2025-10-12 14:00:44,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:01:16] 2025-10-12 14:00:44,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:01:16] 2025-10-12 14:00:45,081 | INFO     | all payload control threads have been joined
[2025-10-12 10:01:16] 2025-10-12 14:00:45,535 | INFO     | all data control threads have been joined
[2025-10-12 10:01:16] 2025-10-12 14:00:45,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:01:16] 2025-10-12 14:00:45,917 | INFO     | all job control threads have been joined
[2025-10-12 10:01:16] 2025-10-12 14:00:45,986 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:45,987 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:45,987 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,087 | INFO     | [payload] control thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,173 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,430 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,540 | INFO     | [data] control thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,890 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,923 | INFO     | [job] control thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:46,981 | INFO     | [job] validate thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:47,458 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:47,459 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:47,494 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:47,606 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:48,987 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:00:55,407 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:01:16] 2025-10-12 14:00:56,412 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:01:16] 2025-10-12 14:01:10,309 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:01:16] 2025-10-12 14:01:11,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600996161344)>', '<ExcThread(monitor, started 140600544306944)>']
[2025-10-12 10:01:16] 2025-10-12 14:01:15,077 | INFO     | PID=25254 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:01:16] 2025-10-12 14:01:15,077 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:01:16] 2025-10-12 14:01:15,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:01:16] 2025-10-12 14:01:15,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:01:16] 2025-10-12 14:01:15,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:01:16] 2025-10-12 14:01:15,078 | INFO     | [monitor] control thread has ended
[2025-10-12 10:01:16] 2025-10-12 14:01:16,526 | INFO     | all workflow threads have been joined
[2025-10-12 10:01:16] 2025-10-12 14:01:16,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:01:16] 2025-10-12 14:01:16,526 | INFO     | traces error code: 0
[2025-10-12 10:01:16] 2025-10-12 14:01:16,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:01:16] 2025-10-12 14:01:16,617 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:01:16] 2025-10-12 14:01:16,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:01:16] 2025-10-12 14:01:16,624 [wrapper] pilotpid: 25254
[2025-10-12 10:01:16] 2025-10-12 14:01:16,628 [wrapper] Pilot exit status: 0
[2025-10-12 10:01:16] 2025-10-12 14:01:16,642 [wrapper] pandaids: 6839869893
[2025-10-12 10:01:16] 2025-10-12 14:01:16,683 [wrapper] cleanup supervisor_pilot  6098 25255
[2025-10-12 10:01:16] 2025-10-12 14:01:16,687 [wrapper] Test setup, not cleaning
[2025-10-12 10:01:16] 2025-10-12 14:01:16,691 [wrapper] apfmon messages muted
[2025-10-12 10:01:16] 2025-10-12 14:01:16,695 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:01:16] 2025-10-12 14:01:16,699 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:01:16]  *** Error codes and diagnostics ***
[2025-10-12 10:01:16]     "exeErrorCode": 0,
[2025-10-12 10:01:16]     "exeErrorDiag": "",
[2025-10-12 10:01:16]     "pilotErrorCode": 0,
[2025-10-12 10:01:16]     "pilotErrorDiag": "",
[2025-10-12 10:01:16]  *** Listing of results directory ***
[2025-10-12 10:01:16] total 407144
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:15 queuedata.json
[2025-10-12 10:01:16] -rwx------ 1 boincer umatlas     36292 Oct 12 07:15 runpilot2-wrapper.sh
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:01:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:47 run_atlas
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:47 job.xml
[2025-10-12 10:01:16] -rw-r--r-- 2 boincer umatlas 223169534 Oct 12 08:47 EVNT.46676267._003667.pool.root.1
[2025-10-12 10:01:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:47 start_atlas.sh
[2025-10-12 10:01:16] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:47 shared
[2025-10-12 10:01:16] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 08:47 input.tar.gz
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:47 boinc_lockfile
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 08:47 pandaJob.out
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas    975512 Oct 12 08:48 agis_schedconf.cvmfs.json
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas   1560580 Oct 12 08:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:01:16] drwx------ 5 boincer umatlas      4096 Oct 12 08:48 pilot3
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 09:58 init_data.xml
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas 187836031 Oct 12 10:00 HITS.46676269._076867.pool.root.1
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:00 boinc_task_state.xml
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas      1049 Oct 12 10:00 memory_monitor_summary.json
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas    370272 Oct 12 10:00 log.46676269._076867.job.log.tgz.1
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas      7858 Oct 12 10:00 heartbeat.json
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:00 boinc_mmap_file
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:00 wrapper_checkpoint.txt
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas        95 Oct 12 10:01 pilot_heartbeat.json
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas      4818 Oct 12 10:01 pilotlog.txt
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas    634123 Oct 12 10:01 log.46676269._076867.job.log.1
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas       357 Oct 12 10:01 output.list
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:01 runtime_log
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas   1024000 Oct 12 10:01 result.tar.gz
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 10:01 runtime_log.err
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas       658 Oct 12 10:01 7tzLDmwD9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSjTMDmGl0V3n.diag
[2025-10-12 10:01:16] -rw-r--r-- 1 boincer umatlas     21837 Oct 12 10:01 stderr.txt
[2025-10-12 10:01:16] HITS file was successfully produced:
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas 187836031 Oct 12 10:00 shared/HITS.pool.root.1
[2025-10-12 10:01:16]  *** Contents of shared directory: ***
[2025-10-12 10:01:16] total 402956
[2025-10-12 10:01:16] -rw-r--r-- 2 boincer umatlas 223169534 Oct 12 08:47 ATLAS.root_0
[2025-10-12 10:01:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:47 start_atlas.sh
[2025-10-12 10:01:16] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 08:47 input.tar.gz
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas 187836031 Oct 12 10:00 HITS.pool.root.1
[2025-10-12 10:01:16] -rw------- 1 boincer umatlas   1024000 Oct 12 10:01 result.tar.gz
10:01:18 (21578): run_atlas exited; CPU time 45801.578372
10:01:18 (21578): called boinc_finish(0)

</stderr_txt>
]]>

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