Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:19:06 (3562895): wrapper (7.7.26015): starting
00:19:06 (3562895): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 00:19:06] Arguments: --nthreads 4
[2025-10-13 00:19:06] Threads: 4
[2025-10-13 00:19:06] Checking for CVMFS
[2025-10-13 00:19:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:19:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:19:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:19:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:19:06] 2.9.2.0 1879657 4821 98656 151640 2 56 26763912 36864000 0 130560 0 4386714 99.992 169560 892 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 00:19:06] CVMFS is ok
[2025-10-13 00:19:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:19:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:19:06] Further information can be found at the LHC@home message board.
[2025-10-13 00:19:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:19:06] Checking for apptainer binary...
[2025-10-13 00:19:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:19:06] Running /usr/bin/apptainer --version
[2025-10-13 00:19:06] apptainer version 1.4.1-1.1
[2025-10-13 00:19:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:19:06] iaxoA393
[2025-10-13 00:19:06] apptainer works
[2025-10-13 00:19:06] Set ATHENA_PROC_NUMBER=4
[2025-10-13 00:19:06] Set ATHENA_CORE_NUMBER=4
[2025-10-13 00:19:06] Starting ATLAS job with PandaID=6839868644
[2025-10-13 00:19:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:29:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:29:25] 2025-10-12 23:28:19,244 | INFO     | will abort loop
[2025-10-13 01:29:25] 2025-10-12 23:28:19,836 | INFO     | all payload control threads have been joined
[2025-10-13 01:29:25] 2025-10-12 23:28:20,106 | INFO     | all data control threads have been joined
[2025-10-13 01:29:25] 2025-10-12 23:28:20,186 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,186 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:29:25] 2025-10-12 23:28:20,250 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,293 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,328 | INFO     | all job control threads have been joined
[2025-10-13 01:29:25] 2025-10-12 23:28:20,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:29:25] 2025-10-12 23:28:20,478 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,530 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,624 | INFO     | [job] validate thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,648 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,842 | INFO     | [payload] control thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:20,982 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:21,111 | INFO     | [data] control thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:21,143 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:21,330 | INFO     | [job] control thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:21,473 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:22,353 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:24,239 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:29:25] 2025-10-12 23:28:50,247 | INFO     | PID=3566680 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:29:25] 2025-10-12 23:28:50,247 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:29:25] 2025-10-12 23:28:50,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:29:25] 2025-10-12 23:28:50,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:29:25] 2025-10-12 23:29:19,145 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:29:25] 2025-10-12 23:29:20,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850195920704)>', '<ExcThread(monitor, started 139848891492096)>']
[2025-10-13 01:29:25] 2025-10-12 23:29:20,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:29:25] 2025-10-12 23:29:20,402 | INFO     | [monitor] control thread has ended
[2025-10-13 01:29:25] 2025-10-12 23:29:25,066 | INFO     | all workflow threads have been joined
[2025-10-13 01:29:25] 2025-10-12 23:29:25,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:29:25] 2025-10-12 23:29:25,067 | INFO     | traces error code: 0
[2025-10-13 01:29:25] 2025-10-12 23:29:25,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:29:25] 2025-10-12 23:29:25,132 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:29:25] 2025-10-12 23:29:25,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:29:25] 2025-10-12 23:29:25,140 [wrapper] pilotpid: 3566680
[2025-10-13 01:29:25] 2025-10-12 23:29:25,144 [wrapper] Pilot exit status: 0
[2025-10-13 01:29:25] 2025-10-12 23:29:25,155 [wrapper] pandaids: 6839868644
[2025-10-13 01:29:25] 2025-10-12 23:29:25,177 [wrapper] cleanup supervisor_pilot 3583252 3566681
[2025-10-13 01:29:25] 2025-10-12 23:29:25,180 [wrapper] Test setup, not cleaning
[2025-10-13 01:29:25] 2025-10-12 23:29:25,184 [wrapper] apfmon messages muted
[2025-10-13 01:29:25] 2025-10-12 23:29:25,187 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:29:25] 2025-10-12 23:29:25,191 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:29:25]  *** Error codes and diagnostics ***
[2025-10-13 01:29:25]     "exeErrorCode": 0,
[2025-10-13 01:29:25]     "exeErrorDiag": "",
[2025-10-13 01:29:25]     "pilotErrorCode": 0,
[2025-10-13 01:29:25]     "pilotErrorDiag": "",
[2025-10-13 01:29:25]  *** Listing of results directory ***
[2025-10-13 01:29:25] total 403320
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:57 pilot3.tar.gz
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:02 queuedata.json
[2025-10-13 01:29:25] -rwx------ 1 boinc boinc     36292 Oct 12 13:02 runpilot2-wrapper.sh
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:29:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:19 run_atlas
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:19 job.xml
[2025-10-13 01:29:25] -rw-r--r-- 2 boinc boinc 219000864 Oct 13 00:19 EVNT.46676267._003652.pool.root.1
[2025-10-13 01:29:25] -rw-r--r-- 2 boinc boinc    569683 Oct 13 00:19 input.tar.gz
[2025-10-13 01:29:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:19 start_atlas.sh
[2025-10-13 01:29:25] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:19 shared
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:19 boinc_setup_complete
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc      6372 Oct 13 00:19 init_data.xml
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:19 boinc_lockfile
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:19 pandaJob.out
[2025-10-13 01:29:25] -rw------- 1 boinc boinc    975603 Oct 13 00:19 agis_schedconf.cvmfs.json
[2025-10-13 01:29:25] -rw------- 1 boinc boinc   1560580 Oct 13 00:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:29:25] drwx------ 5 boinc boinc      4096 Oct 13 00:19 pilot3
[2025-10-13 01:29:25] -rw------- 1 boinc boinc 188381441 Oct 13 01:27 HITS.46676269._076593.pool.root.1
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:27 boinc_task_state.xml
[2025-10-13 01:29:25] -rw------- 1 boinc boinc      1025 Oct 13 01:28 memory_monitor_summary.json
[2025-10-13 01:29:25] -rw------- 1 boinc boinc    246663 Oct 13 01:28 log.46676269._076593.job.log.tgz.1
[2025-10-13 01:29:25] -rw------- 1 boinc boinc      7771 Oct 13 01:28 heartbeat.json
[2025-10-13 01:29:25] -rw------- 1 boinc boinc        95 Oct 13 01:28 pilot_heartbeat.json
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:29 boinc_mmap_file
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:29 wrapper_checkpoint.txt
[2025-10-13 01:29:25] -rw------- 1 boinc boinc      4938 Oct 13 01:29 pilotlog.txt
[2025-10-13 01:29:25] -rw------- 1 boinc boinc    618080 Oct 13 01:29 log.46676269._076593.job.log.1
[2025-10-13 01:29:25] -rw------- 1 boinc boinc       357 Oct 13 01:29 output.list
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:29 runtime_log
[2025-10-13 01:29:25] -rw------- 1 boinc boinc    880640 Oct 13 01:29 result.tar.gz
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc      8787 Oct 13 01:29 runtime_log.err
[2025-10-13 01:29:25] -rw------- 1 boinc boinc       660 Oct 13 01:29 J4VMDms18R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGYjNDmfRZGjn.diag
[2025-10-13 01:29:25] -rw-r--r-- 1 boinc boinc      6942 Oct 13 01:29 stderr.txt
[2025-10-13 01:29:25] HITS file was successfully produced:
[2025-10-13 01:29:25] -rw------- 1 boinc boinc 188381441 Oct 13 01:27 shared/HITS.pool.root.1
[2025-10-13 01:29:25]  *** Contents of shared directory: ***
[2025-10-13 01:29:25] total 399284
[2025-10-13 01:29:25] -rw-r--r-- 2 boinc boinc 219000864 Oct 13 00:19 ATLAS.root_0
[2025-10-13 01:29:25] -rw-r--r-- 2 boinc boinc    569683 Oct 13 00:19 input.tar.gz
[2025-10-13 01:29:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:19 start_atlas.sh
[2025-10-13 01:29:25] -rw------- 1 boinc boinc 188381441 Oct 13 01:27 HITS.pool.root.1
[2025-10-13 01:29:25] -rw------- 1 boinc boinc    880640 Oct 13 01:29 result.tar.gz
01:29:26 (3562895): run_atlas exited; CPU time 15503.194128
01:29:26 (3562895): called boinc_finish(0)

</stderr_txt>
]]>

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