Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:18 (2991166): wrapper (7.7.26015): starting
08:39:18 (2991166): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 08:39:18] Arguments: --nthreads 11
[2025-10-12 08:39:18] Threads: 11
[2025-10-12 08:39:18] Checking for CVMFS
[2025-10-12 08:39:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:39:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:39:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:39:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:39:19] 2.13.1.0 7481 77349 110164 151620 3 493 33855546 40960001 28863 16776704 0 446505284 99.779 253537386 45795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:39:19] CVMFS is ok
[2025-10-12 08:39:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:39:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:39:19] Further information can be found at the LHC@home message board.
[2025-10-12 08:39:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:39:19] Checking for apptainer binary...
[2025-10-12 08:39:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:39:19] Running /usr/bin/apptainer --version
[2025-10-12 08:39:19] apptainer version 1.4.3-1.el9
[2025-10-12 08:39:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:39:19] c-208-38.aglt2.org
[2025-10-12 08:39:19] apptainer works
[2025-10-12 08:39:19] Set ATHENA_PROC_NUMBER=11
[2025-10-12 08:39:19] Set ATHENA_CORE_NUMBER=11
[2025-10-12 08:39:19] Starting ATLAS job with PandaID=6839588968
[2025-10-12 08:39:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:40:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:40:13] 2025-10-12 13:39:08,463 | INFO     | time since job start (3550s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:09,645 | INFO     | monitor loop #252: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:09,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:10,472 | INFO     | time since job start (3552s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:12,171 | INFO     | monitor loop #253: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:12,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:12,479 | INFO     | time since job start (3554s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:14,486 | INFO     | time since job start (3556s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:14,676 | INFO     | monitor loop #254: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:14,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:16,493 | INFO     | time since job start (3558s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:17,185 | INFO     | monitor loop #255: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:17,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:18,500 | INFO     | time since job start (3560s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:19,700 | INFO     | monitor loop #256: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:19,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:21,375 | INFO     | PID=2998438 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:40:13] 2025-10-12 13:39:21,375 | INFO     | .. there are 23 such processes running
[2025-10-12 09:40:13] 2025-10-12 13:39:22,204 | INFO     | monitor loop #257: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:22,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:22,375 | INFO     | time since job start (3564s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:24,407 | INFO     | time since job start (3566s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:24,709 | INFO     | monitor loop #258: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:24,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:26,414 | INFO     | time since job start (3568s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:27,214 | INFO     | monitor loop #259: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:27,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:28,421 | INFO     | time since job start (3570s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:29,723 | INFO     | monitor loop #260: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:29,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:30,428 | INFO     | time since job start (3572s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:32,228 | INFO     | monitor loop #261: job 0:6839588968 is in state 'finished'
[2025-10-12 09:40:13] 2025-10-12 13:39:32,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:40:13] 2025-10-12 13:39:32,435 | INFO     | time since job start (3574s) is within the limit (172800.0s)
[2025-10-12 09:40:13] 2025-10-12 13:39:33,651 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 09:40:13] 2025-10-12 13:39:33,656 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3720.0640781249995
[2025-10-12 09:40:13] 2025-10-12 13:39:33,726 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839588968/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:40:13] 2025-10-12 13:39:33,726 | INFO     | extracted standard info from prmon json
[2025-10-12 09:40:13] 2025-10-12 13:39:33,727 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:40:13] 2025-10-12 13:39:33,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:40:13] 2025-10-12 13:39:33,727 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:40:13] 2025-10-12 13:39:33,727 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:40:13] 2025-10-12 13:39:33,728 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:40:13] 2025-10-12 13:39:33,728 | INFO     | sum of square deviations: 38744912.5
[2025-10-12 09:40:13] 2025-10-12 13:39:33,728 | INFO     | sum of deviations: 294067946.0000006
[2025-10-12 09:40:13] 2025-10-12 13:39:33,728 | INFO     | mean x: 1760274683.5
[2025-10-12 09:40:13] 2025-10-12 13:39:33,728 | INFO     | mean y: 2646340.32
[2025-10-12 09:40:13] 2025-10-12 13:39:33,728 | INFO     | -- intersect: -13357568644.61889
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | intersect: -13357568644.61889
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | chi2: 0.07550728698116319
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | -- intersect: -13357568644.61889
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | current memory leak: 7.59 B/s (using 50 data points, chi2=0.08)
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | could have reported an average CPU frequency of 3733 MHz (5 samples)
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | ..............................
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | . Timing measurements:
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | . get job = 0 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | . initial setup = 3 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,729 | INFO     | . payload setup = 25 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,754 | INFO     | . stage-in = 0 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,755 | INFO     | . payload execution = 3459 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,755 | INFO     | . stage-out = 2 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,755 | INFO     | . log creation = 0 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,755 | INFO     | ..............................
[2025-10-12 09:40:13] 2025-10-12 13:39:33,929 | INFO     | 
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | job summary report
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | --------------------------------------------------
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | PanDA job id: 6839588968
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | task id: 46676269
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | errors: (none)
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | pilot state: finished 
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | transexitcode: 0
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | exeerrorcode: 0
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | exeerrordiag: 
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | exitcode: 0
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | exitmsg: OK
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | cpuconsumptiontime: 23245 s
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | nevents: 400
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | neventsw: 0
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | pid: 3017133
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | pgrp: 3017133
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | corecount: 11
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | event service: False
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | sizes: {0: 2348806, 11: 2348806, 17: 2349096, 22: 2349124, 3489: 2375045, 3493: 2384043, 3495: 2384227, 3534: 2384453}
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | --------------------------------------------------
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | 
[2025-10-12 09:40:13] 2025-10-12 13:39:33,930 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:40:13] 2025-10-12 13:39:34,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | job 6839588968 has completed (purged errors)
[2025-10-12 09:40:13] 2025-10-12 13:39:34,106 | INFO     | overall cleanup function is called
[2025-10-12 09:40:13] 2025-10-12 13:39:35,127 | INFO     | --- collectZombieJob: --- 10, [3017133]
[2025-10-12 09:40:13] 2025-10-12 13:39:35,128 | INFO     | zombie collector waiting for pid 3017133
[2025-10-12 09:40:13] 2025-10-12 13:39:35,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:40:13] 2025-10-12 13:39:35,128 | INFO     | collected zombie processes
[2025-10-12 09:40:13] 2025-10-12 13:39:35,128 | INFO     | will attempt to kill all subprocesses of pid=3017133
[2025-10-12 09:40:13] 2025-10-12 13:39:36,240 | INFO     | process IDs to be killed: [3017133] (in reverse order)
[2025-10-12 09:40:13] 2025-10-12 13:39:36,752 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:40:13] 2025-10-12 13:39:36,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:40:13] 2025-10-12 13:39:36,846 | INFO     | did not find any defunct processes belonging to 3017133
[2025-10-12 09:40:13] 2025-10-12 13:39:36,907 | INFO     | did not find any defunct processes belonging to 3017133
[2025-10-12 09:40:13] 2025-10-12 13:39:36,907 | INFO     | ready for new job
[2025-10-12 09:40:13] 2025-10-12 13:39:36,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:40:13] 2025-10-12 13:39:36,908 | INFO     | ***************************************
[2025-10-12 09:40:13] 2025-10-12 13:39:36,908 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:40:13] 2025-10-12 13:39:36,908 | INFO     | ***************************************
[2025-10-12 09:40:13] 2025-10-12 13:39:36,909 | INFO     | 
[2025-10-12 09:40:13] 2025-10-12 13:39:36,913 | INFO     | architecture information:
[2025-10-12 09:40:13] 2025-10-12 13:39:36,914 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:40:13] 2025-10-12 13:39:36,928 | INFO     | cat /etc/os-release:
[2025-10-12 09:40:13] NAME="CentOS Linux"
[2025-10-12 09:40:13] VERSION="7 (Core)"
[2025-10-12 09:40:13] ID="centos"
[2025-10-12 09:40:13] ID_LIKE="rhel fedora"
[2025-10-12 09:40:13] VERSION_ID="7"
[2025-10-12 09:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:40:13] ANSI_COLOR="0;31"
[2025-10-12 09:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:40:13] HOME_URL="https://www.centos.org/"
[2025-10-12 09:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:40:13] 
[2025-10-12 09:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:40:13] 
[2025-10-12 09:40:13] 2025-10-12 13:39:36,928 | INFO     | ***************************************
[2025-10-12 09:40:13] 2025-10-12 13:39:37,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:40:13] 2025-10-12 13:39:37,524 | INFO     | sufficient remaining disk space (170505797632 B)
[2025-10-12 09:40:13] 2025-10-12 13:39:37,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:40:13] 2025-10-12 13:39:37,524 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:40:13] 2025-10-12 13:39:37,524 | INFO     | update_server=False
[2025-10-12 09:40:13] 2025-10-12 13:39:37,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:40:13] 2025-10-12 13:39:37,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:40:13] 2025-10-12 13:39:37,993 | INFO     | all data control threads have been joined
[2025-10-12 09:40:13] 2025-10-12 13:39:38,172 | INFO     | all payload control threads have been joined
[2025-10-12 09:40:13] 2025-10-12 13:39:38,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:40:13] 2025-10-12 13:39:38,256 | INFO     | aborting loop
[2025-10-12 09:40:13] 2025-10-12 13:39:38,260 | INFO     | all job control threads have been joined
[2025-10-12 09:40:13] 2025-10-12 13:39:38,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:40:13] 2025-10-12 13:39:38,530 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:38,723 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:38,808 | INFO     | [job] validate thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:38,828 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:38,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:40:13] 2025-10-12 13:39:38,999 | INFO     | [data] control thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,178 | INFO     | [payload] control thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,261 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,266 | INFO     | [job] control thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,311 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,588 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,783 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,823 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:39,956 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:40,539 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:41,533 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:48,370 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:40:13] 2025-10-12 13:39:49,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:40:13] 2025-10-12 13:39:53,959 [wrapper] supervise_pilot (15 min periods counter: 5)
[2025-10-12 09:40:13] 2025-10-12 13:40:04,246 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:40:13] 2025-10-12 13:40:06,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940621100864)>', '<ExcThread(monitor, started 139939832395520)>']
[2025-10-12 09:40:13] 2025-10-12 13:40:06,465 | INFO     | PID=2998438 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:40:13] 2025-10-12 13:40:06,465 | INFO     | .. there are 23 such processes running
[2025-10-12 09:40:13] 2025-10-12 13:40:06,466 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:40:13] 2025-10-12 13:40:06,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:40:13] 2025-10-12 13:40:06,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:40:13] 2025-10-12 13:40:06,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:40:13] 2025-10-12 13:40:06,466 | INFO     | [monitor] control thread has ended
[2025-10-12 09:40:13] 2025-10-12 13:40:11,079 | INFO     | all workflow threads have been joined
[2025-10-12 09:40:13] 2025-10-12 13:40:11,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:40:13] 2025-10-12 13:40:11,080 | INFO     | traces error code: 0
[2025-10-12 09:40:13] 2025-10-12 13:40:11,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:40:13] 2025-10-12 13:40:12,075 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:40:13] 2025-10-12 13:40:12,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:40:13] 2025-10-12 13:40:12,151 [wrapper] pilotpid: 2998438
[2025-10-12 09:40:13] 2025-10-12 13:40:12,193 [wrapper] Pilot exit status: 0
[2025-10-12 09:40:13] 2025-10-12 13:40:12,395 [wrapper] pandaids: 6839588968
[2025-10-12 09:40:13] 2025-10-12 13:40:12,948 [wrapper] cleanup supervisor_pilot 3192359 2998439
[2025-10-12 09:40:13] 2025-10-12 13:40:12,951 [wrapper] Test setup, not cleaning
[2025-10-12 09:40:13] 2025-10-12 13:40:12,953 [wrapper] apfmon messages muted
[2025-10-12 09:40:13] 2025-10-12 13:40:12,956 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:40:13] 2025-10-12 13:40:12,962 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:40:13]  *** Error codes and diagnostics ***
[2025-10-12 09:40:13]     "exeErrorCode": 0,
[2025-10-12 09:40:13]     "exeErrorDiag": "",
[2025-10-12 09:40:13]     "pilotErrorCode": 0,
[2025-10-12 09:40:13]     "pilotErrorDiag": "",
[2025-10-12 09:40:13]  *** Listing of results directory ***
[2025-10-12 09:40:13] total 403808
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:03 queuedata.json
[2025-10-12 09:40:13] -rwx------. 1 boincer umatlas     36292 Oct 12 02:04 runpilot2-wrapper.sh
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:40:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:39 run_atlas
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:39 job.xml
[2025-10-12 09:40:13] -rw-r--r--. 2 boincer umatlas 218514428 Oct 12 08:39 EVNT.46676267._004329.pool.root.1
[2025-10-12 09:40:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:39 start_atlas.sh
[2025-10-12 09:40:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:39 shared
[2025-10-12 09:40:13] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 08:39 input.tar.gz
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:39 boinc_lockfile
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 08:39 pandaJob.out
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas    975512 Oct 12 08:39 agis_schedconf.cvmfs.json
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:40:13] drwx------. 5 boincer umatlas      4096 Oct 12 08:39 pilot3
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas 189326677 Oct 12 09:37 HITS.46676269._072160.pool.root.1
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas       530 Oct 12 09:38 boinc_task_state.xml
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas      1047 Oct 12 09:38 memory_monitor_summary.json
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas    362986 Oct 12 09:38 log.46676269._072160.job.log.tgz.1
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas      7801 Oct 12 09:39 heartbeat.json
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas      7172 Oct 12 09:39 init_data.xml
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas        95 Oct 12 09:40 pilot_heartbeat.json
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas        27 Oct 12 09:40 wrapper_checkpoint.txt
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas      4897 Oct 12 09:40 pilotlog.txt
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:40 boinc_mmap_file
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas    512517 Oct 12 09:40 log.46676269._072160.job.log.1
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas       357 Oct 12 09:40 output.list
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:40 runtime_log
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas    890880 Oct 12 09:40 result.tar.gz
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 09:40 runtime_log.err
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas       656 Oct 12 09:40 I6HLDm1M4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmJTMDmCbAoGm.diag
[2025-10-12 09:40:13] -rw-r--r--. 1 boincer umatlas     22260 Oct 12 09:40 stderr.txt
[2025-10-12 09:40:13] HITS file was successfully produced:
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas 189326677 Oct 12 09:37 shared/HITS.pool.root.1
[2025-10-12 09:40:13]  *** Contents of shared directory: ***
[2025-10-12 09:40:13] total 399744
[2025-10-12 09:40:13] -rw-r--r--. 2 boincer umatlas 218514428 Oct 12 08:39 ATLAS.root_0
[2025-10-12 09:40:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:39 start_atlas.sh
[2025-10-12 09:40:13] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 08:39 input.tar.gz
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas 189326677 Oct 12 09:37 HITS.pool.root.1
[2025-10-12 09:40:13] -rw-------. 1 boincer umatlas    890880 Oct 12 09:40 result.tar.gz
09:40:14 (2991166): run_atlas exited; CPU time 23330.540472
09:40:14 (2991166): called boinc_finish(0)

</stderr_txt>
]]>

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