Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:14 (1854990): wrapper (7.7.26015): starting
08:37:14 (1854990): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:37:14] Arguments: --nthreads 8
[2025-10-12 08:37:14] Threads: 8
[2025-10-12 08:37:14] Checking for CVMFS
[2025-10-12 08:37:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:37:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:37:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:37:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:37:16] 2.13.2.0 7534 77346 135168 151620 3 378 36973654 40960001 32163 16776704 0 464581815 99.773 264874288 44651 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:37:16] CVMFS is ok
[2025-10-12 08:37:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:37:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:37:16] Further information can be found at the LHC@home message board.
[2025-10-12 08:37:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:37:16] Checking for apptainer binary...
[2025-10-12 08:37:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:37:16] Running /usr/bin/apptainer --version
[2025-10-12 08:37:16] apptainer version 1.4.3-1.el9
[2025-10-12 08:37:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:37:17] c-208-39.aglt2.org
[2025-10-12 08:37:17] apptainer works
[2025-10-12 08:37:17] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:37:17] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:37:17] Starting ATLAS job with PandaID=6839867651
[2025-10-12 08:37:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:03:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:03:03] 2025-10-12 14:01:19,044 | INFO     | monitor loop #343: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:19,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:19,247 | INFO     | job 6839867651 has state=finished
[2025-10-12 10:03:03] 2025-10-12 14:01:19,248 | INFO     | preparing for final server update for job 6839867651 in state='finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:19,248 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:03:03] 2025-10-12 14:01:19,248 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:03:03] 2025-10-12 14:01:19,248 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:03:03] 2025-10-12 14:01:19,249 | INFO     | job 6839867651 has finished - writing final server update
[2025-10-12 10:03:03] 2025-10-12 14:01:19,249 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:03:03] 2025-10-12 14:01:19,250 | INFO     | executing command: lscpu
[2025-10-12 10:03:03] 2025-10-12 14:01:19,308 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:03:03] 2025-10-12 14:01:20,831 | INFO     | time since job start (4976s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:21,549 | INFO     | monitor loop #344: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:21,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:22,838 | INFO     | time since job start (4978s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:24,054 | INFO     | monitor loop #345: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:24,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:24,853 | INFO     | time since job start (4980s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:26,559 | INFO     | monitor loop #346: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:26,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:26,861 | INFO     | time since job start (4982s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:28,874 | INFO     | time since job start (4984s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:29,064 | INFO     | monitor loop #347: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:29,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:30,881 | INFO     | time since job start (4986s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:31,569 | INFO     | monitor loop #348: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:31,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:33,149 | INFO     | PID=1863933 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:03:03] 2025-10-12 14:01:33,149 | INFO     | .. there are 31 such processes running
[2025-10-12 10:03:03] 2025-10-12 14:01:34,078 | INFO     | monitor loop #349: job 0:6839867651 is in state 'finished'
[2025-10-12 10:03:03] 2025-10-12 14:01:34,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:03:03] 2025-10-12 14:01:34,150 | INFO     | time since job start (4990s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,156 | INFO     | time since job start (4992s) is within the limit (172800.0s)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,401 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 10:03:03] 2025-10-12 14:01:36,406 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3687.5839531249994
[2025-10-12 10:03:03] 2025-10-12 14:01:36,418 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6839867651/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,418 | INFO     | extracted standard info from prmon json
[2025-10-12 10:03:03] 2025-10-12 14:01:36,418 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:03:03] 2025-10-12 14:01:36,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:03:03] 2025-10-12 14:01:36,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:03:03] 2025-10-12 14:01:36,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | sum of square deviations: 120674009.75342458
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | sum of deviations: -1756182000.6986303
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | mean x: 1760275345.6849315
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | mean y: 2516806.2739726026
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | -- intersect: 25619995538.289894
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | intersect: 25619995538.289894
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | chi2: 0.04653623334891938
[2025-10-12 10:03:03] 2025-10-12 14:01:36,420 | INFO     | -- intersect: 25619995538.289894
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | current memory leak: -14.55 B/s (using 73 data points, chi2=0.05)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | could have reported an average CPU frequency of 3676 MHz (6 samples)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | ..............................
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . Timing measurements:
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . get job = 0 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . initial setup = 6 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . payload setup = 41 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . stage-in = 0 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . payload execution = 4856 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . stage-out = 1 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | . log creation = 0 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,421 | INFO     | ..............................
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | 
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | job summary report
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | --------------------------------------------------
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | PanDA job id: 6839867651
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | task id: 46676269
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | errors: (none)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | pilot state: finished 
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | transexitcode: 0
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | exeerrorcode: 0
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | exeerrordiag: 
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | exitcode: 0
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | exitmsg: OK
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | cpuconsumptiontime: 24200 s
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | nevents: 400
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | neventsw: 0
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | pid: 1891757
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | pgrp: 1891757
[2025-10-12 10:03:03] 2025-10-12 14:01:36,551 | INFO     | corecount: 8
[2025-10-12 10:03:03] 2025-10-12 14:01:36,552 | INFO     | event service: False
[2025-10-12 10:03:03] 2025-10-12 14:01:36,552 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 29: 2349203, 34: 2349231, 4902: 2375690, 4905: 2384688, 4906: 2384744, 4927: 2384938}
[2025-10-12 10:03:03] 2025-10-12 14:01:36,552 | INFO     | --------------------------------------------------
[2025-10-12 10:03:03] 2025-10-12 14:01:36,552 | INFO     | 
[2025-10-12 10:03:03] 2025-10-12 14:01:36,552 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | job 6839867651 has completed (purged errors)
[2025-10-12 10:03:03] 2025-10-12 14:01:36,588 | INFO     | overall cleanup function is called
[2025-10-12 10:03:03] 2025-10-12 14:01:37,600 | INFO     | --- collectZombieJob: --- 10, [1891757]
[2025-10-12 10:03:03] 2025-10-12 14:01:37,600 | INFO     | zombie collector waiting for pid 1891757
[2025-10-12 10:03:03] 2025-10-12 14:01:37,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:03:03] 2025-10-12 14:01:37,600 | INFO     | collected zombie processes
[2025-10-12 10:03:03] 2025-10-12 14:01:37,600 | INFO     | will attempt to kill all subprocesses of pid=1891757
[2025-10-12 10:03:03] 2025-10-12 14:01:38,144 | INFO     | process IDs to be killed: [1891757] (in reverse order)
[2025-10-12 10:03:03] 2025-10-12 14:01:38,298 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:03:03] 2025-10-12 14:01:38,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:03:03] 2025-10-12 14:01:38,327 | INFO     | did not find any defunct processes belonging to 1891757
[2025-10-12 10:03:03] 2025-10-12 14:01:38,349 | INFO     | did not find any defunct processes belonging to 1891757
[2025-10-12 10:03:03] 2025-10-12 14:01:38,349 | INFO     | ready for new job
[2025-10-12 10:03:03] 2025-10-12 14:01:38,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:03:03] 2025-10-12 14:01:38,350 | INFO     | ***************************************
[2025-10-12 10:03:03] 2025-10-12 14:01:38,351 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:03:03] 2025-10-12 14:01:38,351 | INFO     | ***************************************
[2025-10-12 10:03:03] 2025-10-12 14:01:38,351 | INFO     | 
[2025-10-12 10:03:03] 2025-10-12 14:01:38,356 | INFO     | architecture information:
[2025-10-12 10:03:03] 2025-10-12 14:01:38,356 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:03:03] 2025-10-12 14:01:38,375 | INFO     | cat /etc/os-release:
[2025-10-12 10:03:03] NAME="CentOS Linux"
[2025-10-12 10:03:03] VERSION="7 (Core)"
[2025-10-12 10:03:03] ID="centos"
[2025-10-12 10:03:03] ID_LIKE="rhel fedora"
[2025-10-12 10:03:03] VERSION_ID="7"
[2025-10-12 10:03:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:03:03] ANSI_COLOR="0;31"
[2025-10-12 10:03:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:03:03] HOME_URL="https://www.centos.org/"
[2025-10-12 10:03:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:03:03] 
[2025-10-12 10:03:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:03:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:03:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:03:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:03:03] 
[2025-10-12 10:03:03] 2025-10-12 14:01:38,375 | INFO     | ***************************************
[2025-10-12 10:03:03] 2025-10-12 14:01:38,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-12 10:03:03] 2025-10-12 14:01:38,922 | INFO     | sufficient remaining disk space (169533767680 B)
[2025-10-12 10:03:03] 2025-10-12 14:01:38,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:03:03] 2025-10-12 14:01:38,922 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:03:03] 2025-10-12 14:01:38,922 | INFO     | update_server=False
[2025-10-12 10:03:03] 2025-10-12 14:01:38,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:03:03] 2025-10-12 14:01:39,090 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 10:03:03] 2025-10-12 14:01:39,090 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 10:03:03] 2025-10-12 14:01:39,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:03:03] 2025-10-12 14:01:39,090 | INFO     | will abort loop
[2025-10-12 10:03:03] 2025-10-12 14:01:39,269 | INFO     | all payload control threads have been joined
[2025-10-12 10:03:03] 2025-10-12 14:01:39,706 | INFO     | all data control threads have been joined
[2025-10-12 10:03:03] 2025-10-12 14:01:39,927 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,023 | INFO     | all job control threads have been joined
[2025-10-12 10:03:03] 2025-10-12 14:01:40,096 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,271 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,275 | INFO     | [payload] control thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,283 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:03:03] 2025-10-12 14:01:40,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:03:03] 2025-10-12 14:01:40,648 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,697 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:40,712 | INFO     | [data] control thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:41,029 | INFO     | [job] control thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:41,088 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:41,255 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:41,314 | INFO     | [job] validate thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:41,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:03:03] 2025-10-12 14:01:42,309 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:42,572 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:44,427 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:01:49,593 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:03:03] 2025-10-12 14:01:50,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:03:03] 2025-10-12 14:02:10,162 | INFO     | PID=1863933 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:03:03] 2025-10-12 14:02:10,164 | INFO     | .. there are 31 such processes running
[2025-10-12 10:03:03] 2025-10-12 14:02:10,164 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:03:03] 2025-10-12 14:02:10,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:03:03] 2025-10-12 14:02:10,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:03:03] 2025-10-12 14:02:32,765 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:03:03] 2025-10-12 14:02:33,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122678204224)>', '<ExcThread(monitor, started 140122318149376)>']
[2025-10-12 10:03:03] 2025-10-12 14:02:34,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:03:03] 2025-10-12 14:02:34,316 | INFO     | [monitor] control thread has ended
[2025-10-12 10:03:03] 2025-10-12 14:02:38,434 | INFO     | all workflow threads have been joined
[2025-10-12 10:03:03] 2025-10-12 14:02:38,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:03:03] 2025-10-12 14:02:38,434 | INFO     | traces error code: 0
[2025-10-12 10:03:03] 2025-10-12 14:02:38,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:03:03] 2025-10-12 14:02:39,515 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:03:03] 2025-10-12 14:02:39,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:03:03] 2025-10-12 14:02:39,554 [wrapper] pilotpid: 1863933
[2025-10-12 10:03:03] 2025-10-12 14:02:39,598 [wrapper] Pilot exit status: 0
[2025-10-12 10:03:03] 2025-10-12 14:02:39,677 [wrapper] pandaids: 6839867651
[2025-10-12 10:03:03] 2025-10-12 14:02:40,053 [wrapper] cleanup supervisor_pilot 2178533 1863934
[2025-10-12 10:03:03] 2025-10-12 14:02:40,066 [wrapper] Test setup, not cleaning
[2025-10-12 10:03:03] 2025-10-12 14:02:40,068 [wrapper] apfmon messages muted
[2025-10-12 10:03:03] 2025-10-12 14:02:40,070 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:03:03] 2025-10-12 14:02:40,072 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:03:03]  *** Error codes and diagnostics ***
[2025-10-12 10:03:03]     "exeErrorCode": 0,
[2025-10-12 10:03:03]     "exeErrorDiag": "",
[2025-10-12 10:03:03]     "pilotErrorCode": 0,
[2025-10-12 10:03:03]     "pilotErrorDiag": "",
[2025-10-12 10:03:03]  *** Listing of results directory ***
[2025-10-12 10:03:03] total 409804
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 10:03:03] -rwx------. 1 boincer umatlas     36292 Oct 12 06:59 runpilot2-wrapper.sh
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:59 queuedata.json
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:03:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:37 run_atlas
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:37 job.xml
[2025-10-12 10:03:03] -rw-r--r--. 2 boincer umatlas 223670041 Oct 12 08:37 EVNT.46676267._003646.pool.root.1
[2025-10-12 10:03:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:37 start_atlas.sh
[2025-10-12 10:03:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:37 shared
[2025-10-12 10:03:03] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 08:37 input.tar.gz
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:37 boinc_lockfile
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 08:37 pandaJob.out
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas    975512 Oct 12 08:38 agis_schedconf.cvmfs.json
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:03:03] drwx------. 5 boincer umatlas      4096 Oct 12 08:38 pilot3
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas 190024214 Oct 12 10:00 HITS.46676269._076530.pool.root.1
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas       529 Oct 12 10:00 boinc_task_state.xml
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas      1046 Oct 12 10:01 memory_monitor_summary.json
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas    335700 Oct 12 10:01 log.46676269._076530.job.log.tgz.1
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas      7806 Oct 12 10:01 heartbeat.json
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 10:01 init_data.xml
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas        95 Oct 12 10:02 pilot_heartbeat.json
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas      5083 Oct 12 10:02 pilotlog.txt
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas    686502 Oct 12 10:02 log.46676269._076530.job.log.1
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas       357 Oct 12 10:02 output.list
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:02 runtime_log
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas   1044480 Oct 12 10:02 result.tar.gz
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 10:02 runtime_log.err
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas       656 Oct 12 10:02 eXQLDmmy8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzWjNDmTVCBOm.diag
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas        27 Oct 12 10:03 wrapper_checkpoint.txt
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:03 boinc_mmap_file
[2025-10-12 10:03:03] -rw-r--r--. 1 boincer umatlas     22273 Oct 12 10:03 stderr.txt
[2025-10-12 10:03:03] HITS file was successfully produced:
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas 190024214 Oct 12 10:00 shared/HITS.pool.root.1
[2025-10-12 10:03:03]  *** Contents of shared directory: ***
[2025-10-12 10:03:03] total 405600
[2025-10-12 10:03:03] -rw-r--r--. 2 boincer umatlas 223670041 Oct 12 08:37 ATLAS.root_0
[2025-10-12 10:03:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:37 start_atlas.sh
[2025-10-12 10:03:03] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 08:37 input.tar.gz
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas 190024214 Oct 12 10:00 HITS.pool.root.1
[2025-10-12 10:03:03] -rw-------. 1 boincer umatlas   1044480 Oct 12 10:02 result.tar.gz
10:03:04 (1854990): run_atlas exited; CPU time 24359.176529
10:03:04 (1854990): called boinc_finish(0)

</stderr_txt>
]]>

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