Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:36:23 (16435): wrapper (7.7.26015): starting
14:36:23 (16435): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:36:23] Arguments: --nthreads 8
[2025-10-12 14:36:23] Threads: 8
[2025-10-12 14:36:23] Checking for CVMFS
[2025-10-12 14:36:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:36:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:36:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:36:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:36:27] 2.11.2.0 20077 220582 140692 151620 0 11 14007602 25165824 4632 130560 0 116899911 99.869 65784143 2971 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 14:36:27] CVMFS is ok
[2025-10-12 14:36:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:36:27] Checking for apptainer binary...
[2025-10-12 14:36:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:36:27] Running /usr/bin/apptainer --version
[2025-10-12 14:36:27] apptainer version 1.3.2-1.el7
[2025-10-12 14:36:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:36:39] cg-vwn315.simple-grid.lan
[2025-10-12 14:36:39] apptainer works
[2025-10-12 14:36:39] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:36:39] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:36:39] Starting ATLAS job with PandaID=6839317476
[2025-10-12 14:36:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:43:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:43:09] 2025-10-12 16:42:03,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:43:09] 2025-10-12 16:42:03,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:43:09] 2025-10-12 16:42:03,193 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:43:09] 2025-10-12 16:42:03,194 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,195 | INFO     | sum of deviations: 77496020648.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,196 | INFO     | mean x: 1760280254.5
[2025-10-12 18:43:09] 2025-10-12 16:42:03,196 | INFO     | mean y: 2436157.3684210526
[2025-10-12 18:43:09] 2025-10-12 16:42:03,196 | INFO     | -- intersect: -37115738360.371086
[2025-10-12 18:43:09] 2025-10-12 16:42:03,196 | INFO     | intersect: -37115738360.371086
[2025-10-12 18:43:09] 2025-10-12 16:42:03,196 | INFO     | chi2: 6.116784470220792
[2025-10-12 18:43:09] 2025-10-12 16:42:03,197 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,199 | INFO     | sum of deviations: 90526634711.99998
[2025-10-12 18:43:09] 2025-10-12 16:42:03,199 | INFO     | mean x: 1760280102.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,199 | INFO     | mean y: 2444386.0403587446
[2025-10-12 18:43:09] 2025-10-12 16:42:03,199 | INFO     | -- intersect: -46339459905.63597
[2025-10-12 18:43:09] 2025-10-12 16:42:03,199 | INFO     | intersect: -46339459905.63597
[2025-10-12 18:43:09] 2025-10-12 16:42:03,200 | INFO     | chi2: 5.400935601362066
[2025-10-12 18:43:09] 2025-10-12 16:42:03,200 | INFO     | current chi2=5.400935601362066 (change=11.703025868310288 %)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,200 | INFO     | right removable region: 222
[2025-10-12 18:43:09] 2025-10-12 16:42:03,200 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,202 | INFO     | sum of deviations: 515264132.9999943
[2025-10-12 18:43:09] 2025-10-12 16:42:03,202 | INFO     | mean x: 1760280407.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,203 | INFO     | mean y: 2485735.65470852
[2025-10-12 18:43:09] 2025-10-12 16:42:03,203 | INFO     | -- intersect: -261285532.87561414
[2025-10-12 18:43:09] 2025-10-12 16:42:03,203 | INFO     | intersect: -261285532.87561414
[2025-10-12 18:43:09] 2025-10-12 16:42:03,203 | INFO     | chi2: 1.5754576051554525
[2025-10-12 18:43:09] 2025-10-12 16:42:03,203 | INFO     | current chi2=1.5754576051554525 (change=74.24369596762031 %)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,204 | INFO     | sum of square deviations: 3212467674.5
[2025-10-12 18:43:09] 2025-10-12 16:42:03,206 | INFO     | sum of deviations: -24098727344.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,206 | INFO     | mean x: 1760280559.5
[2025-10-12 18:43:09] 2025-10-12 16:42:03,206 | INFO     | mean y: 2502177.779816514
[2025-10-12 18:43:09] 2025-10-12 16:42:03,206 | INFO     | -- intersect: 13207466569.814281
[2025-10-12 18:43:09] 2025-10-12 16:42:03,206 | INFO     | intersect: 13207466569.814281
[2025-10-12 18:43:09] 2025-10-12 16:42:03,206 | INFO     | chi2: 0.8862184359922491
[2025-10-12 18:43:09] 2025-10-12 16:42:03,207 | INFO     | current chi2=0.8862184359922491 (change=43.74850626940198 %)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,207 | INFO     | sum of square deviations: 2996454322.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,209 | INFO     | sum of deviations: -23249512672.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,209 | INFO     | mean x: 1760280712.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,209 | INFO     | mean y: 2501542.4507042253
[2025-10-12 18:43:09] 2025-10-12 16:42:03,209 | INFO     | -- intersect: 13660533443.502718
[2025-10-12 18:43:09] 2025-10-12 16:42:03,209 | INFO     | intersect: 13660533443.502718
[2025-10-12 18:43:09] 2025-10-12 16:42:03,209 | INFO     | chi2: 0.8726380632311431
[2025-10-12 18:43:09] 2025-10-12 16:42:03,210 | INFO     | current chi2=0.8726380632311431 (change=1.5323956498265392 %)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,210 | INFO     | left removable region: 30
[2025-10-12 18:43:09] 2025-10-12 16:42:03,210 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,211 | INFO     | sum of deviations: 4922281021.499999
[2025-10-12 18:43:09] 2025-10-12 16:42:03,212 | INFO     | mean x: 1760280986.5
[2025-10-12 18:43:09] 2025-10-12 16:42:03,212 | INFO     | mean y: 2500826.2552083335
[2025-10-12 18:43:09] 2025-10-12 16:42:03,212 | INFO     | -- intersect: -3945507625.9700394
[2025-10-12 18:43:09] 2025-10-12 16:42:03,212 | INFO     | intersect: -3945507625.9700394
[2025-10-12 18:43:09] 2025-10-12 16:42:03,212 | INFO     | chi2: 0.0007375033872522419
[2025-10-12 18:43:09] 2025-10-12 16:42:03,213 | INFO     | -- intersect: -3945507625.9700394
[2025-10-12 18:43:09] 2025-10-12 16:42:03,213 | INFO     | current memory leak: 2.24 B/s (using 192 data points, chi2=0.00)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,213 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | ..............................
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . Timing measurements:
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . get job = 0 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . initial setup = 10 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . payload setup = 131 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . stage-in = 0 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . payload execution = 14047 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . stage-out = 8 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | . log creation = 1 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,214 | INFO     | ..............................
[2025-10-12 18:43:09] 2025-10-12 16:42:03,342 | INFO     | 
[2025-10-12 18:43:09] 2025-10-12 16:42:03,342 | INFO     | job summary report
[2025-10-12 18:43:09] 2025-10-12 16:42:03,342 | INFO     | --------------------------------------------------
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | PanDA job id: 6839317476
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | task id: 46676269
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | errors: (none)
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | pilot state: finished 
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | transexitcode: 0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | exeerrorcode: 0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | exeerrordiag: 
[2025-10-12 18:43:09] 2025-10-12 16:42:03,343 | INFO     | exitcode: 0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | exitmsg: OK
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | cpuconsumptiontime: 52496 s
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | nevents: 400
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | neventsw: 0
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | pid: 27121
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | pgrp: 27121
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | corecount: 8
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | event service: False
[2025-10-12 18:43:09] 2025-10-12 16:42:03,344 | INFO     | sizes: {0: 2348029, 1: 2348715, 2: 2348914, 12: 2348914, 23: 2348942, 34: 2348970, 45: 2349126, 55: 2349154, 66: 2349182, 77: 2349210, 88: 2349266, 96: 2349836, 98
[2025-10-12 18:43:09] 2025-10-12 16:42:03,345 | INFO     | --------------------------------------------------
[2025-10-12 18:43:09] 2025-10-12 16:42:03,345 | INFO     | 
[2025-10-12 18:43:09] 2025-10-12 16:42:03,345 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-10-12 18:43:09] 2025-10-12 16:42:04,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:43:09] 2025-10-12 16:42:04,048 | INFO     | job 6839317476 has completed (purged errors)
[2025-10-12 18:43:09] 2025-10-12 16:42:04,049 | INFO     | overall cleanup function is called
[2025-10-12 18:43:09] 2025-10-12 16:42:05,064 | INFO     | --- collectZombieJob: --- 10, [27121]
[2025-10-12 18:43:09] 2025-10-12 16:42:05,064 | INFO     | zombie collector waiting for pid 27121
[2025-10-12 18:43:09] 2025-10-12 16:42:05,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:43:09] 2025-10-12 16:42:05,065 | INFO     | collected zombie processes
[2025-10-12 18:43:09] 2025-10-12 16:42:05,065 | INFO     | will attempt to kill all subprocesses of pid=27121
[2025-10-12 18:43:09] 2025-10-12 16:42:05,214 | INFO     | process IDs to be killed: [27121] (in reverse order)
[2025-10-12 18:43:09] 2025-10-12 16:42:05,799 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:43:09] 2025-10-12 16:42:05,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:43:09] 2025-10-12 16:42:05,802 | INFO     | did not find any defunct processes belonging to 27121
[2025-10-12 18:43:09] 2025-10-12 16:42:05,806 | INFO     | did not find any defunct processes belonging to 27121
[2025-10-12 18:43:09] 2025-10-12 16:42:05,806 | INFO     | ready for new job
[2025-10-12 18:43:09] 2025-10-12 16:42:05,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:43:09] 2025-10-12 16:42:05,812 | INFO     | ***************************************
[2025-10-12 18:43:09] 2025-10-12 16:42:05,812 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:43:09] 2025-10-12 16:42:05,812 | INFO     | ***************************************
[2025-10-12 18:43:09] 2025-10-12 16:42:05,812 | INFO     | 
[2025-10-12 18:43:09] 2025-10-12 16:42:05,813 | INFO     | pilot is running in a VM
[2025-10-12 18:43:09] 2025-10-12 16:42:05,813 | INFO     | architecture information:
[2025-10-12 18:43:09] 2025-10-12 16:42:05,813 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:43:09] 2025-10-12 16:42:05,992 | INFO     | cat /etc/os-release:
[2025-10-12 18:43:09] NAME="CentOS Linux"
[2025-10-12 18:43:09] VERSION="7 (Core)"
[2025-10-12 18:43:09] ID="centos"
[2025-10-12 18:43:09] ID_LIKE="rhel fedora"
[2025-10-12 18:43:09] VERSION_ID="7"
[2025-10-12 18:43:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:43:09] ANSI_COLOR="0;31"
[2025-10-12 18:43:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:43:09] HOME_URL="https://www.centos.org/"
[2025-10-12 18:43:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:43:09] 
[2025-10-12 18:43:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:43:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:43:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:43:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:43:09] 
[2025-10-12 18:43:09] 2025-10-12 16:42:05,992 | INFO     | ***************************************
[2025-10-12 18:43:09] 2025-10-12 16:42:06,495 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-10-12 18:43:09] 2025-10-12 16:42:06,737 | INFO     | sufficient remaining disk space (495981690880 B)
[2025-10-12 18:43:09] 2025-10-12 16:42:06,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:43:09] 2025-10-12 16:42:06,737 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:43:09] 2025-10-12 16:42:06,737 | INFO     | update_server=False
[2025-10-12 18:43:09] 2025-10-12 16:42:06,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:43:09] 2025-10-12 16:42:06,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 16:42:06,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 16:42:06,743 | INFO     | aborting loop
[2025-10-12 18:43:09] 2025-10-12 16:42:06,936 | INFO     | all data control threads have been joined
[2025-10-12 18:43:09] 2025-10-12 16:42:07,310 | INFO     | all job control threads have been joined
[2025-10-12 18:43:09] 2025-10-12 16:42:07,576 | INFO     | all payload control threads have been joined
[2025-10-12 18:43:09] 2025-10-12 16:42:07,743 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:07,749 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:07,803 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:07,844 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:07,942 | INFO     | [data] control thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,063 | INFO     | [job] validate thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,121 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,244 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,293 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,316 | INFO     | [job] control thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 16:42:08,581 | INFO     | [payload] control thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,746 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:08,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:43:09] 2025-10-12 16:42:08,851 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:09,353 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:12,856 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:43:09] 2025-10-12 16:42:35,585 | INFO     | PID=20562 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:43:09] 2025-10-12 16:42:35,585 | INFO     | .. there are 9 such processes running
[2025-10-12 18:43:09] 2025-10-12 16:42:35,587 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:43:09] 2025-10-12 16:42:35,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:43:09] 2025-10-12 16:42:35,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:43:09] 2025-10-12 16:43:00,265 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:43:09] 2025-10-12 16:43:00,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987439036224)>', '<ExcThread(monitor, started 139986833745664)>']
[2025-10-12 18:43:09] 2025-10-12 16:43:00,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:43:09] 2025-10-12 16:43:00,735 | INFO     | [monitor] control thread has ended
[2025-10-12 18:43:09] 2025-10-12 16:43:05,682 | INFO     | all workflow threads have been joined
[2025-10-12 18:43:09] 2025-10-12 16:43:05,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:43:09] 2025-10-12 16:43:05,683 | INFO     | traces error code: 0
[2025-10-12 18:43:09] 2025-10-12 16:43:05,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:43:09] 2025-10-12 16:43:06,152 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:43:09] 2025-10-12 16:43:06,243 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:43:09] 2025-10-12 16:43:06,348 [wrapper] pilotpid: 20562
[2025-10-12 18:43:09] 2025-10-12 16:43:06,395 [wrapper] Pilot exit status: 0
[2025-10-12 18:43:09] 2025-10-12 16:43:06,794 [wrapper] pandaids: 6839317476
[2025-10-12 18:43:09] 2025-10-12 16:43:07,792 [wrapper] cleanup supervisor_pilot 21242 20563
[2025-10-12 18:43:09] 2025-10-12 16:43:07,834 [wrapper] Test setup, not cleaning
[2025-10-12 18:43:09] 2025-10-12 16:43:07,893 [wrapper] apfmon messages muted
[2025-10-12 18:43:09] 2025-10-12 16:43:07,969 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:43:09] 2025-10-12 16:43:08,027 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:43:09]  *** Error codes and diagnostics ***
[2025-10-12 18:43:09]     "exeErrorCode": 0,
[2025-10-12 18:43:09]     "exeErrorDiag": "",
[2025-10-12 18:43:09]     "pilotErrorCode": 0,
[2025-10-12 18:43:09]     "pilotErrorDiag": "",
[2025-10-12 18:43:09]  *** Listing of results directory ***
[2025-10-12 18:43:09] total 404680
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc    557409 Oct 12 04:49 pilot3.tar.gz
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc      5112 Oct 12 04:50 queuedata.json
[2025-10-12 18:43:09] -rwx------. 1 boinc boinc     36292 Oct 12 04:51 runpilot2-wrapper.sh
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:43:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:36 run_atlas
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:36 job.xml
[2025-10-12 18:43:09] -rw-r--r--. 2 boinc boinc 219357343 Oct 12 14:36 EVNT.46676267._003190.pool.root.1
[2025-10-12 18:43:09] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:36 start_atlas.sh
[2025-10-12 18:43:09] drwxrwx--x. 2 boinc boinc        68 Oct 12 14:36 shared
[2025-10-12 18:43:09] -rw-r--r--. 2 boinc boinc    569680 Oct 12 14:36 input.tar.gz
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc      6389 Oct 12 14:36 init_data.xml
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:36 boinc_lockfile
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc      2550 Oct 12 14:36 pandaJob.out
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc    975512 Oct 12 14:40 agis_schedconf.cvmfs.json
[2025-10-12 18:43:09] drwx------. 5 boinc boinc      4096 Oct 12 14:40 pilot3
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc 186370387 Oct 12 18:39 HITS.46676269._069515.pool.root.1
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc       531 Oct 12 18:39 boinc_task_state.xml
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc      1015 Oct 12 18:40 memory_monitor_summary.json
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc   1560580 Oct 12 18:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc    450102 Oct 12 18:40 log.46676269._069515.job.log.tgz.1
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc      7779 Oct 12 18:42 heartbeat.json
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc        95 Oct 12 18:42 pilot_heartbeat.json
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:42 boinc_mmap_file
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc        28 Oct 12 18:42 wrapper_checkpoint.txt
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc      4885 Oct 12 18:43 pilotlog.txt
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc   1936359 Oct 12 18:43 log.46676269._069515.job.log.1
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc       357 Oct 12 18:43 output.list
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:43 runtime_log
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc   2406400 Oct 12 18:43 result.tar.gz
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc      8717 Oct 12 18:43 runtime_log.err
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc       657 Oct 12 18:43 Gz6KDm7L1R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmf1SMDmD33JTn.diag
[2025-10-12 18:43:09] -rw-r--r--. 1 boinc boinc     20620 Oct 12 18:43 stderr.txt
[2025-10-12 18:43:09] HITS file was successfully produced:
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc 186370387 Oct 12 18:39 shared/HITS.pool.root.1
[2025-10-12 18:43:09]  *** Contents of shared directory: ***
[2025-10-12 18:43:09] total 399152
[2025-10-12 18:43:09] -rw-r--r--. 2 boinc boinc 219357343 Oct 12 14:36 ATLAS.root_0
[2025-10-12 18:43:09] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:36 start_atlas.sh
[2025-10-12 18:43:09] -rw-r--r--. 2 boinc boinc    569680 Oct 12 14:36 input.tar.gz
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc 186370387 Oct 12 18:39 HITS.pool.root.1
[2025-10-12 18:43:09] -rw-------. 1 boinc boinc   2406400 Oct 12 18:43 result.tar.gz
18:43:11 (16435): run_atlas exited; CPU time 52694.211473
18:43:11 (16435): called boinc_finish(0)

</stderr_txt>
]]>

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