Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:34:55 (6565): wrapper (7.7.26015): starting
14:34:55 (6565): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:34:55] Arguments: --nthreads 8
[2025-10-12 14:34:55] Threads: 8
[2025-10-12 14:34:55] Checking for CVMFS
[2025-10-12 14:34:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:35:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:35:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:35:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:35:02] 2.11.2.0 16647 220581 142180 151620 0 11 13264327 25165825 4632 130560 0 148328603 99.903 68820035 4560 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 14:35:02] CVMFS is ok
[2025-10-12 14:35:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:35:02] Checking for apptainer binary...
[2025-10-12 14:35:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:35:02] Running /usr/bin/apptainer --version
[2025-10-12 14:35:02] apptainer version 1.3.2-1.el7
[2025-10-12 14:35:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:35:07] cg-vwn490.simple-grid.lan
[2025-10-12 14:35:07] apptainer works
[2025-10-12 14:35:07] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:35:07] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:35:07] Starting ATLAS job with PandaID=6839867486
[2025-10-12 14:35:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:35:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:35:28] 2025-10-12 16:34:26,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:35:28] 2025-10-12 16:34:26,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:35:28] 2025-10-12 16:34:26,282 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:35:28] 2025-10-12 16:34:26,282 | INFO     | sum of square deviations: 3392567795.5
[2025-10-12 18:35:28] 2025-10-12 16:34:26,284 | INFO     | sum of deviations: 61970950602.99999
[2025-10-12 18:35:28] 2025-10-12 16:34:26,284 | INFO     | mean x: 1760279964.5
[2025-10-12 18:35:28] 2025-10-12 16:34:26,284 | INFO     | mean y: 2441055.5405405406
[2025-10-12 18:35:28] 2025-10-12 16:34:26,284 | INFO     | -- intersect: -32152029924.28047
[2025-10-12 18:35:28] 2025-10-12 16:34:26,284 | INFO     | intersect: -32152029924.28047
[2025-10-12 18:35:28] 2025-10-12 16:34:26,285 | INFO     | chi2: 6.077314372232116
[2025-10-12 18:35:28] 2025-10-12 16:34:26,285 | INFO     | sum of square deviations: 3168461268.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | sum of deviations: 75073351419.00002
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | mean x: 1760279812.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | mean y: 2449788.0967741935
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | -- intersect: -41705525706.728584
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | intersect: -41705525706.728584
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | chi2: 5.354725150456192
[2025-10-12 18:35:28] 2025-10-12 16:34:26,287 | INFO     | current chi2=5.354725150456192 (change=11.8899431149639 %)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,288 | INFO     | right removable region: 216
[2025-10-12 18:35:28] 2025-10-12 16:34:26,288 | INFO     | sum of square deviations: 3168461268.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,289 | INFO     | sum of deviations: -11920456154.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,290 | INFO     | mean x: 1760280117.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,290 | INFO     | mean y: 2491280.986175115
[2025-10-12 18:35:28] 2025-10-12 16:34:26,290 | INFO     | -- intersect: 6625056677.438575
[2025-10-12 18:35:28] 2025-10-12 16:34:26,290 | INFO     | intersect: 6625056677.438575
[2025-10-12 18:35:28] 2025-10-12 16:34:26,290 | INFO     | chi2: 1.6575298683840152
[2025-10-12 18:35:28] 2025-10-12 16:34:26,290 | INFO     | current chi2=1.6575298683840152 (change=72.72594822546219 %)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,291 | INFO     | sum of square deviations: 2954447953.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,292 | INFO     | sum of deviations: -35931234033.5
[2025-10-12 18:35:28] 2025-10-12 16:34:26,292 | INFO     | mean x: 1760280269.5
[2025-10-12 18:35:28] 2025-10-12 16:34:26,292 | INFO     | mean y: 2508225.882075472
[2025-10-12 18:35:28] 2025-10-12 16:34:26,292 | INFO     | -- intersect: 21410582876.08288
[2025-10-12 18:35:28] 2025-10-12 16:34:26,293 | INFO     | intersect: 21410582876.08288
[2025-10-12 18:35:28] 2025-10-12 16:34:26,293 | INFO     | chi2: 0.9493049537843092
[2025-10-12 18:35:28] 2025-10-12 16:34:26,293 | INFO     | current chi2=0.9493049537843092 (change=42.72773167521739 %)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,293 | INFO     | sum of square deviations: 2750295288.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,295 | INFO     | sum of deviations: -31396804615.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,295 | INFO     | mean x: 1760280422.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,295 | INFO     | mean y: 2504808.275362319
[2025-10-12 18:35:28] 2025-10-12 16:34:26,295 | INFO     | -- intersect: 20097503595.59967
[2025-10-12 18:35:28] 2025-10-12 16:34:26,295 | INFO     | intersect: 20097503595.59967
[2025-10-12 18:35:28] 2025-10-12 16:34:26,295 | INFO     | chi2: 0.9334584361413543
[2025-10-12 18:35:28] 2025-10-12 16:34:26,296 | INFO     | current chi2=0.9334584361413543 (change=1.669275776954962 %)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,296 | INFO     | left removable region: 30
[2025-10-12 18:35:28] 2025-10-12 16:34:26,296 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 18:35:28] 2025-10-12 16:34:26,297 | INFO     | sum of deviations: 4710132019.0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,297 | INFO     | mean x: 1760280696.5
[2025-10-12 18:35:28] 2025-10-12 16:34:26,297 | INFO     | mean y: 2496759.709677419
[2025-10-12 18:35:28] 2025-10-12 16:34:26,298 | INFO     | -- intersect: -4152879012.889057
[2025-10-12 18:35:28] 2025-10-12 16:34:26,298 | INFO     | intersect: -4152879012.889057
[2025-10-12 18:35:28] 2025-10-12 16:34:26,298 | INFO     | chi2: 5.2944837373861006e-05
[2025-10-12 18:35:28] 2025-10-12 16:34:26,298 | INFO     | -- intersect: -4152879012.889057
[2025-10-12 18:35:28] 2025-10-12 16:34:26,298 | INFO     | current memory leak: 2.36 B/s (using 186 data points, chi2=0.00)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,299 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,299 | INFO     | ..............................
[2025-10-12 18:35:28] 2025-10-12 16:34:26,299 | INFO     | . Timing measurements:
[2025-10-12 18:35:28] 2025-10-12 16:34:26,299 | INFO     | . get job = 0 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | . initial setup = 7 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | . payload setup = 136 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | . stage-in = 0 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | . payload execution = 13700 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | . stage-out = 3 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | . log creation = 1 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,300 | INFO     | ..............................
[2025-10-12 18:35:28] 2025-10-12 16:34:26,409 | INFO     | 
[2025-10-12 18:35:28] 2025-10-12 16:34:26,409 | INFO     | job summary report
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | --------------------------------------------------
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | PanDA job id: 6839867486
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | task id: 46676269
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | errors: (none)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | pilot state: finished 
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | transexitcode: 0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | exeerrorcode: 0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | exeerrordiag: 
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | exitcode: 0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | exitmsg: OK
[2025-10-12 18:35:28] 2025-10-12 16:34:26,410 | INFO     | cpuconsumptiontime: 51799 s
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | nevents: 400
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | neventsw: 0
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | pid: 17283
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | pgrp: 17283
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | corecount: 8
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | event service: False
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | sizes: {0: 2348851, 1: 2348879, 12: 2348879, 23: 2348907, 33: 2348935, 44: 2348991, 55: 2349147, 65: 2349175, 76: 2349203, 87: 2349259, 90: 2349549, 98: 2349857, 1
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | --------------------------------------------------
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | 
[2025-10-12 18:35:28] 2025-10-12 16:34:26,411 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-12 18:35:28] 2025-10-12 16:34:26,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:35:28] 2025-10-12 16:34:26,835 | INFO     | job 6839867486 has completed (purged errors)
[2025-10-12 18:35:28] 2025-10-12 16:34:26,836 | INFO     | overall cleanup function is called
[2025-10-12 18:35:28] 2025-10-12 16:34:27,844 | INFO     | --- collectZombieJob: --- 10, [17283]
[2025-10-12 18:35:28] 2025-10-12 16:34:27,844 | INFO     | zombie collector waiting for pid 17283
[2025-10-12 18:35:28] 2025-10-12 16:34:27,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:35:28] 2025-10-12 16:34:27,845 | INFO     | collected zombie processes
[2025-10-12 18:35:28] 2025-10-12 16:34:27,845 | INFO     | will attempt to kill all subprocesses of pid=17283
[2025-10-12 18:35:28] 2025-10-12 16:34:27,953 | INFO     | process IDs to be killed: [17283] (in reverse order)
[2025-10-12 18:35:28] 2025-10-12 16:34:28,782 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:35:28] 2025-10-12 16:34:28,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:35:28] 2025-10-12 16:34:28,786 | INFO     | did not find any defunct processes belonging to 17283
[2025-10-12 18:35:28] 2025-10-12 16:34:28,788 | INFO     | did not find any defunct processes belonging to 17283
[2025-10-12 18:35:28] 2025-10-12 16:34:28,789 | INFO     | ready for new job
[2025-10-12 18:35:28] 2025-10-12 16:34:28,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:35:28] 2025-10-12 16:34:28,791 | INFO     | ***************************************
[2025-10-12 18:35:28] 2025-10-12 16:34:28,791 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:35:28] 2025-10-12 16:34:28,792 | INFO     | ***************************************
[2025-10-12 18:35:28] 2025-10-12 16:34:28,792 | INFO     | 
[2025-10-12 18:35:28] 2025-10-12 16:34:28,792 | INFO     | pilot is running in a VM
[2025-10-12 18:35:28] 2025-10-12 16:34:28,792 | INFO     | architecture information:
[2025-10-12 18:35:28] 2025-10-12 16:34:28,816 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:35:28] 2025-10-12 16:34:29,084 | INFO     | cat /etc/os-release:
[2025-10-12 18:35:28] NAME="CentOS Linux"
[2025-10-12 18:35:28] VERSION="7 (Core)"
[2025-10-12 18:35:28] ID="centos"
[2025-10-12 18:35:28] ID_LIKE="rhel fedora"
[2025-10-12 18:35:28] VERSION_ID="7"
[2025-10-12 18:35:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:35:28] ANSI_COLOR="0;31"
[2025-10-12 18:35:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:35:28] HOME_URL="https://www.centos.org/"
[2025-10-12 18:35:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:35:28] 
[2025-10-12 18:35:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:35:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:35:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:35:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:35:28] 
[2025-10-12 18:35:28] 2025-10-12 16:34:29,085 | INFO     | ***************************************
[2025-10-12 18:35:28] 2025-10-12 16:34:29,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-12 18:35:28] 2025-10-12 16:34:29,818 | INFO     | sufficient remaining disk space (495287533568 B)
[2025-10-12 18:35:28] 2025-10-12 16:34:29,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:35:28] 2025-10-12 16:34:29,819 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:35:28] 2025-10-12 16:34:29,819 | INFO     | update_server=False
[2025-10-12 18:35:28] 2025-10-12 16:34:29,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:35:28] 2025-10-12 16:34:29,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:35:28] 2025-10-12 16:34:29,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:35:28] 2025-10-12 16:34:29,820 | INFO     | aborting loop
[2025-10-12 18:35:28] 2025-10-12 16:34:29,917 | INFO     | all data control threads have been joined
[2025-10-12 18:35:28] 2025-10-12 16:34:29,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:35:28] 2025-10-12 16:34:29,990 | INFO     | all job control threads have been joined
[2025-10-12 18:35:28] 2025-10-12 16:34:30,768 | INFO     | all payload control threads have been joined
[2025-10-12 18:35:28] 2025-10-12 16:34:30,825 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:30,826 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:30,868 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:30,923 | INFO     | [data] control thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:30,995 | INFO     | [job] control thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,182 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:35:28] 2025-10-12 16:34:31,452 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,729 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,739 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,774 | INFO     | [payload] control thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,826 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:31,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:32,228 | INFO     | [job] validate thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:32,322 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:32,431 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:33,992 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:35:28] 2025-10-12 16:34:58,355 | INFO     | PID=10682 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:35:28] 2025-10-12 16:34:58,355 | INFO     | .. there are 9 such processes running
[2025-10-12 18:35:28] 2025-10-12 16:34:58,356 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:35:28] 2025-10-12 16:34:58,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:35:28] 2025-10-12 16:34:58,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:35:28] 2025-10-12 16:35:16,978 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:35:28] 2025-10-12 16:35:18,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483680466752)>', '<ExcThread(monitor, started 140483246405376)>']
[2025-10-12 18:35:28] 2025-10-12 16:35:19,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:35:28] 2025-10-12 16:35:19,479 | INFO     | [monitor] control thread has ended
[2025-10-12 18:35:28] 2025-10-12 16:35:23,728 | INFO     | all workflow threads have been joined
[2025-10-12 18:35:28] 2025-10-12 16:35:23,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:35:28] 2025-10-12 16:35:23,729 | INFO     | traces error code: 0
[2025-10-12 18:35:28] 2025-10-12 16:35:23,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:35:28] 2025-10-12 16:35:24,122 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:35:28] 2025-10-12 16:35:24,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:35:28] 2025-10-12 16:35:24,327 [wrapper] pilotpid: 10682
[2025-10-12 18:35:28] 2025-10-12 16:35:24,435 [wrapper] Pilot exit status: 0
[2025-10-12 18:35:28] 2025-10-12 16:35:24,869 [wrapper] pandaids: 6839867486
[2025-10-12 18:35:28] 2025-10-12 16:35:25,821 [wrapper] cleanup supervisor_pilot  8717 10683
[2025-10-12 18:35:28] 2025-10-12 16:35:25,915 [wrapper] Test setup, not cleaning
[2025-10-12 18:35:28] 2025-10-12 16:35:26,007 [wrapper] apfmon messages muted
[2025-10-12 18:35:28] 2025-10-12 16:35:26,047 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:35:28] 2025-10-12 16:35:26,077 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:35:28]  *** Error codes and diagnostics ***
[2025-10-12 18:35:28]     "exeErrorCode": 0,
[2025-10-12 18:35:28]     "exeErrorDiag": "",
[2025-10-12 18:35:28]     "pilotErrorCode": 0,
[2025-10-12 18:35:28]     "pilotErrorDiag": "",
[2025-10-12 18:35:28]  *** Listing of results directory ***
[2025-10-12 18:35:28] total 416056
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-12 18:35:28] -rwx------. 1 boinc boinc     36292 Oct 12 12:53 runpilot2-wrapper.sh
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:53 queuedata.json
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:35:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:34 run_atlas
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:34 job.xml
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc      6390 Oct 12 14:34 init_data.xml
[2025-10-12 18:35:28] -rw-r--r--. 2 boinc boinc 222248950 Oct 12 14:34 EVNT.46676267._003635.pool.root.1
[2025-10-12 18:35:28] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:34 start_atlas.sh
[2025-10-12 18:35:28] drwxrwx--x. 2 boinc boinc        68 Oct 12 14:34 shared
[2025-10-12 18:35:28] -rw-r--r--. 2 boinc boinc    569675 Oct 12 14:34 input.tar.gz
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:34 boinc_lockfile
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc      2547 Oct 12 14:35 pandaJob.out
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc    975512 Oct 12 14:38 agis_schedconf.cvmfs.json
[2025-10-12 18:35:28] drwx------. 5 boinc boinc      4096 Oct 12 14:38 pilot3
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc 195251327 Oct 12 18:31 HITS.46676269._076365.pool.root.1
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc       531 Oct 12 18:31 boinc_task_state.xml
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc      1018 Oct 12 18:32 memory_monitor_summary.json
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc   1560580 Oct 12 18:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc    435792 Oct 12 18:32 log.46676269._076365.job.log.tgz.1
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc        95 Oct 12 18:34 pilot_heartbeat.json
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc      7775 Oct 12 18:34 heartbeat.json
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc        28 Oct 12 18:35 wrapper_checkpoint.txt
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:35 boinc_mmap_file
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc      4884 Oct 12 18:35 pilotlog.txt
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc   1889845 Oct 12 18:35 log.46676269._076365.job.log.1
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc       357 Oct 12 18:35 output.list
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:35 runtime_log
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc   2344960 Oct 12 18:35 result.tar.gz
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc      8703 Oct 12 18:35 runtime_log.err
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc       657 Oct 12 18:35 E1wNDm3s8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4fTMDmEK3CGm.diag
[2025-10-12 18:35:28] -rw-r--r--. 1 boinc boinc     20596 Oct 12 18:35 stderr.txt
[2025-10-12 18:35:28] HITS file was successfully produced:
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc 195251327 Oct 12 18:31 shared/HITS.pool.root.1
[2025-10-12 18:35:28]  *** Contents of shared directory: ***
[2025-10-12 18:35:28] total 410584
[2025-10-12 18:35:28] -rw-r--r--. 2 boinc boinc 222248950 Oct 12 14:34 ATLAS.root_0
[2025-10-12 18:35:28] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:34 start_atlas.sh
[2025-10-12 18:35:28] -rw-r--r--. 2 boinc boinc    569675 Oct 12 14:34 input.tar.gz
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc 195251327 Oct 12 18:31 HITS.pool.root.1
[2025-10-12 18:35:28] -rw-------. 1 boinc boinc   2344960 Oct 12 18:35 result.tar.gz
18:35:30 (6565): run_atlas exited; CPU time 51979.792831
18:35:30 (6565): called boinc_finish(0)

</stderr_txt>
]]>

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