Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:31:17 (19541): wrapper (7.7.26015): starting
03:31:17 (19541): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:31:17] Arguments: --nthreads 8
[2025-10-13 03:31:17] Threads: 8
[2025-10-13 03:31:17] Checking for CVMFS
[2025-10-13 03:31:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:31:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:31:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:31:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:31:20] 2.11.2.0 15701 25289 82012 151643 2 61 18420373 25165825 4632 130560 0 6521724 99.897 2603501 1789 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 03:31:20] CVMFS is ok
[2025-10-13 03:31:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:31:20] Checking for apptainer binary...
[2025-10-13 03:31:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:31:21] Running /usr/bin/apptainer --version
[2025-10-13 03:31:21] apptainer version 1.3.2-1.el7
[2025-10-13 03:31:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:31:34] cg-vwn419.simple-grid.lan
[2025-10-13 03:31:34] apptainer works
[2025-10-13 03:31:34] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:31:34] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:31:34] Starting ATLAS job with PandaID=6839475140
[2025-10-13 03:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:48:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:48:06] 2025-10-13 05:46:55,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:48:06] 2025-10-13 05:46:55,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:48:06] 2025-10-13 05:46:55,023 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:48:06] 2025-10-13 05:46:55,024 | INFO     | sum of square deviations: 4180243959.5
[2025-10-13 07:48:06] 2025-10-13 05:46:55,026 | INFO     | sum of deviations: 83420448983.99997
[2025-10-13 07:48:06] 2025-10-13 05:46:55,026 | INFO     | mean x: 1760327024.5
[2025-10-13 07:48:06] 2025-10-13 05:46:55,026 | INFO     | mean y: 2456062.5798319327
[2025-10-13 07:48:06] 2025-10-13 05:46:55,026 | INFO     | -- intersect: -35126419707.63315
[2025-10-13 07:48:06] 2025-10-13 05:46:55,027 | INFO     | intersect: -35126419707.63315
[2025-10-13 07:48:06] 2025-10-13 05:46:55,027 | INFO     | chi2: 4.590048939452269
[2025-10-13 07:48:06] 2025-10-13 05:46:55,028 | INFO     | sum of square deviations: 3922276332.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,030 | INFO     | sum of deviations: 81314054019.00003
[2025-10-13 07:48:06] 2025-10-13 05:46:55,030 | INFO     | mean x: 1760326872.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,030 | INFO     | mean y: 2454819.5622317595
[2025-10-13 07:48:06] 2025-10-13 05:46:55,030 | INFO     | -- intersect: -36491484476.121574
[2025-10-13 07:48:06] 2025-10-13 05:46:55,030 | INFO     | intersect: -36491484476.121574
[2025-10-13 07:48:06] 2025-10-13 05:46:55,030 | INFO     | chi2: 4.596094337227852
[2025-10-13 07:48:06] 2025-10-13 05:46:55,031 | INFO     | current chi2=4.596094337227852 (change=-0.1317066082590385 %)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,031 | INFO     | right removable region: 232
[2025-10-13 07:48:06] 2025-10-13 05:46:55,031 | INFO     | sum of square deviations: 3922276332.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,033 | INFO     | sum of deviations: 7223351050.999998
[2025-10-13 07:48:06] 2025-10-13 05:46:55,033 | INFO     | mean x: 1760327177.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,033 | INFO     | mean y: 2501037.098712446
[2025-10-13 07:48:06] 2025-10-13 05:46:55,034 | INFO     | -- intersect: -3239356519.0217905
[2025-10-13 07:48:06] 2025-10-13 05:46:55,034 | INFO     | intersect: -3239356519.0217905
[2025-10-13 07:48:06] 2025-10-13 05:46:55,034 | INFO     | chi2: 0.556654390864701
[2025-10-13 07:48:06] 2025-10-13 05:46:55,034 | INFO     | current chi2=0.556654390864701 (change=87.87258266289581 %)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,035 | INFO     | sum of square deviations: 3675146117.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,037 | INFO     | sum of deviations: -11654329562.999996
[2025-10-13 07:48:06] 2025-10-13 05:46:55,037 | INFO     | mean x: 1760327329.5
[2025-10-13 07:48:06] 2025-10-13 05:46:55,037 | INFO     | mean y: 2512567.2807017546
[2025-10-13 07:48:06] 2025-10-13 05:46:55,037 | INFO     | -- intersect: 5584721868.252744
[2025-10-13 07:48:06] 2025-10-13 05:46:55,037 | INFO     | intersect: 5584721868.252744
[2025-10-13 07:48:06] 2025-10-13 05:46:55,038 | INFO     | chi2: 0.10896158287787559
[2025-10-13 07:48:06] 2025-10-13 05:46:55,038 | INFO     | current chi2=0.10896158287787559 (change=80.4256312954586 %)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,038 | INFO     | sum of square deviations: 3438620752.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,040 | INFO     | sum of deviations: -4669026314.999999
[2025-10-13 07:48:06] 2025-10-13 05:46:55,040 | INFO     | mean x: 1760327482.0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,040 | INFO     | mean y: 2508058.201793722
[2025-10-13 07:48:06] 2025-10-13 05:46:55,040 | INFO     | -- intersect: 2392715042.119771
[2025-10-13 07:48:06] 2025-10-13 05:46:55,041 | INFO     | intersect: 2392715042.119771
[2025-10-13 07:48:06] 2025-10-13 05:46:55,041 | INFO     | chi2: 0.0822294680726358
[2025-10-13 07:48:06] 2025-10-13 05:46:55,041 | INFO     | current chi2=0.0822294680726358 (change=24.533522824463013 %)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,041 | INFO     | left removable region: 30
[2025-10-13 07:48:06] 2025-10-13 05:46:55,042 | INFO     | sum of square deviations: 2555770710.5
[2025-10-13 07:48:06] 2025-10-13 05:46:55,043 | INFO     | sum of deviations: 6391057992.500001
[2025-10-13 07:48:06] 2025-10-13 05:46:55,044 | INFO     | mean x: 1760327756.5
[2025-10-13 07:48:06] 2025-10-13 05:46:55,044 | INFO     | mean y: 2499863.4306930695
[2025-10-13 07:48:06] 2025-10-13 05:46:55,044 | INFO     | -- intersect: -4399443053.975207
[2025-10-13 07:48:06] 2025-10-13 05:46:55,044 | INFO     | intersect: -4399443053.975207
[2025-10-13 07:48:06] 2025-10-13 05:46:55,044 | INFO     | chi2: 0.0013612306966010628
[2025-10-13 07:48:06] 2025-10-13 05:46:55,045 | INFO     | -- intersect: -4399443053.975207
[2025-10-13 07:48:06] 2025-10-13 05:46:55,045 | INFO     | current memory leak: 2.50 B/s (using 202 data points, chi2=0.00)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,045 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | ..............................
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | . Timing measurements:
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | . get job = 0 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | . initial setup = 9 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | . payload setup = 120 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | . stage-in = 0 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,046 | INFO     | . payload execution = 14669 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,047 | INFO     | . stage-out = 4 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,047 | INFO     | . log creation = 1 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,047 | INFO     | ..............................
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | 
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | job summary report
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | --------------------------------------------------
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | PanDA job id: 6839475140
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | task id: 46676269
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | errors: (none)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | pilot state: finished 
[2025-10-13 07:48:06] 2025-10-13 05:46:55,190 | INFO     | transexitcode: 0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | exeerrorcode: 0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | exeerrordiag: 
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | exitcode: 0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | exitmsg: OK
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | cpuconsumptiontime: 54450 s
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | nevents: 400
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | neventsw: 0
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | pid: 29846
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | pgrp: 29846
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | corecount: 8
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | event service: False
[2025-10-13 07:48:06] 2025-10-13 05:46:55,191 | INFO     | sizes: {0: 2348684, 1: 2348883, 12: 2348883, 23: 2348911, 34: 2348939, 44: 2348967, 55: 2349123, 66: 2349151, 77: 2349179, 87: 2349235, 90: 2349525, 98: 2349833, 1
[2025-10-13 07:48:06] 2025-10-13 05:46:55,192 | INFO     | --------------------------------------------------
[2025-10-13 07:48:06] 2025-10-13 05:46:55,192 | INFO     | 
[2025-10-13 07:48:06] 2025-10-13 05:46:55,192 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-13 07:48:06] 2025-10-13 05:46:55,338 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,340 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:48:06] 2025-10-13 05:46:55,341 | INFO     | job 6839475140 has completed (purged errors)
[2025-10-13 07:48:06] 2025-10-13 05:46:55,341 | INFO     | overall cleanup function is called
[2025-10-13 07:48:06] 2025-10-13 05:46:56,350 | INFO     | --- collectZombieJob: --- 10, [29846]
[2025-10-13 07:48:06] 2025-10-13 05:46:56,350 | INFO     | zombie collector waiting for pid 29846
[2025-10-13 07:48:06] 2025-10-13 05:46:56,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:48:06] 2025-10-13 05:46:56,350 | INFO     | collected zombie processes
[2025-10-13 07:48:06] 2025-10-13 05:46:56,350 | INFO     | will attempt to kill all subprocesses of pid=29846
[2025-10-13 07:48:06] 2025-10-13 05:46:56,464 | INFO     | process IDs to be killed: [29846] (in reverse order)
[2025-10-13 07:48:06] 2025-10-13 05:46:57,488 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:48:06] 2025-10-13 05:46:57,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:48:06] 2025-10-13 05:46:57,491 | INFO     | did not find any defunct processes belonging to 29846
[2025-10-13 07:48:06] 2025-10-13 05:46:57,494 | INFO     | did not find any defunct processes belonging to 29846
[2025-10-13 07:48:06] 2025-10-13 05:46:57,495 | INFO     | ready for new job
[2025-10-13 07:48:06] 2025-10-13 05:46:57,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:48:06] 2025-10-13 05:46:57,497 | INFO     | ***************************************
[2025-10-13 07:48:06] 2025-10-13 05:46:57,497 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:48:06] 2025-10-13 05:46:57,497 | INFO     | ***************************************
[2025-10-13 07:48:06] 2025-10-13 05:46:57,497 | INFO     | 
[2025-10-13 07:48:06] 2025-10-13 05:46:57,498 | INFO     | pilot is running in a VM
[2025-10-13 07:48:06] 2025-10-13 05:46:57,498 | INFO     | architecture information:
[2025-10-13 07:48:06] 2025-10-13 05:46:57,506 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:48:06] 2025-10-13 05:46:57,620 | INFO     | cat /etc/os-release:
[2025-10-13 07:48:06] NAME="CentOS Linux"
[2025-10-13 07:48:06] VERSION="7 (Core)"
[2025-10-13 07:48:06] ID="centos"
[2025-10-13 07:48:06] ID_LIKE="rhel fedora"
[2025-10-13 07:48:06] VERSION_ID="7"
[2025-10-13 07:48:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:48:06] ANSI_COLOR="0;31"
[2025-10-13 07:48:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:48:06] HOME_URL="https://www.centos.org/"
[2025-10-13 07:48:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:48:06] 
[2025-10-13 07:48:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:48:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:48:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:48:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:48:06] 
[2025-10-13 07:48:06] 2025-10-13 05:46:57,620 | INFO     | ***************************************
[2025-10-13 07:48:06] 2025-10-13 05:46:58,125 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-13 07:48:06] 2025-10-13 05:46:58,199 | INFO     | sufficient remaining disk space (494138294272 B)
[2025-10-13 07:48:06] 2025-10-13 05:46:58,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:48:06] 2025-10-13 05:46:58,200 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:48:06] 2025-10-13 05:46:58,200 | INFO     | update_server=False
[2025-10-13 07:48:06] 2025-10-13 05:46:58,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:48:06] 2025-10-13 05:46:58,357 | INFO     | all job control threads have been joined
[2025-10-13 07:48:06] 2025-10-13 05:46:58,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:48:06] 2025-10-13 05:46:59,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:48:06] 2025-10-13 05:46:59,036 | INFO     | all data control threads have been joined
[2025-10-13 07:48:06] 2025-10-13 05:46:59,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:48:06] 2025-10-13 05:46:59,074 | INFO     | aborting loop
[2025-10-13 07:48:06] 2025-10-13 05:46:59,206 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:46:59,332 | INFO     | all payload control threads have been joined
[2025-10-13 07:48:06] 2025-10-13 05:46:59,363 | INFO     | [job] control thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:46:59,384 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:46:59,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:46:59,983 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:46:59,993 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,041 | INFO     | [data] control thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,055 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,080 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:48:06] 2025-10-13 05:47:00,274 | INFO     | [job] validate thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,338 | INFO     | [payload] control thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,352 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,663 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:00,824 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:01,198 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:03,037 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:48:06] 2025-10-13 05:47:26,777 | INFO     | PID=23317 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:48:06] 2025-10-13 05:47:26,777 | INFO     | .. there are 9 such processes running
[2025-10-13 07:48:06] 2025-10-13 05:47:26,781 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:48:06] 2025-10-13 05:47:26,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:48:06] 2025-10-13 05:47:26,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:48:06] 2025-10-13 05:47:55,525 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:48:06] 2025-10-13 05:47:57,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144571041600)>', '<ExcThread(monitor, started 140144262747904)>']
[2025-10-13 07:48:06] 2025-10-13 05:47:57,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:48:06] 2025-10-13 05:47:57,961 | INFO     | [monitor] control thread has ended
[2025-10-13 07:48:06] 2025-10-13 05:48:02,081 | INFO     | all workflow threads have been joined
[2025-10-13 07:48:06] 2025-10-13 05:48:02,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:48:06] 2025-10-13 05:48:02,081 | INFO     | traces error code: 0
[2025-10-13 07:48:06] 2025-10-13 05:48:02,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:48:06] 2025-10-13 05:48:02,391 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:48:06] 2025-10-13 05:48:02,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:48:06] 2025-10-13 05:48:02,598 [wrapper] pilotpid: 23317
[2025-10-13 07:48:06] 2025-10-13 05:48:02,681 [wrapper] Pilot exit status: 0
[2025-10-13 07:48:06] 2025-10-13 05:48:03,115 [wrapper] pandaids: 6839475140
[2025-10-13 07:48:06] 2025-10-13 05:48:04,188 [wrapper] cleanup supervisor_pilot 29900 23318
[2025-10-13 07:48:06] 2025-10-13 05:48:04,294 [wrapper] Test setup, not cleaning
[2025-10-13 07:48:06] 2025-10-13 05:48:04,390 [wrapper] apfmon messages muted
[2025-10-13 07:48:06] 2025-10-13 05:48:04,481 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:48:06] 2025-10-13 05:48:04,583 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:48:06]  *** Error codes and diagnostics ***
[2025-10-13 07:48:06]     "exeErrorCode": 0,
[2025-10-13 07:48:06]     "exeErrorDiag": "",
[2025-10-13 07:48:06]     "pilotErrorCode": 0,
[2025-10-13 07:48:06]     "pilotErrorDiag": "",
[2025-10-13 07:48:06]  *** Listing of results directory ***
[2025-10-13 07:48:06] total 408768
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-13 07:48:06] -rwx------. 1 boinc boinc     36292 Oct 12 07:23 runpilot2-wrapper.sh
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:23 queuedata.json
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc       100 Oct 13 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:48:06] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 03:31 run_atlas
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc       105 Oct 13 03:31 job.xml
[2025-10-13 07:48:06] -rw-r--r--. 2 boinc boinc 219080105 Oct 13 03:31 EVNT.46676267._004320.pool.root.1
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc      6386 Oct 13 03:31 init_data.xml
[2025-10-13 07:48:06] drwxrwx--x. 2 boinc boinc        68 Oct 13 03:31 shared
[2025-10-13 07:48:06] -rw-r--r--. 2 boinc boinc    569676 Oct 13 03:31 input.tar.gz
[2025-10-13 07:48:06] -rw-r--r--. 2 boinc boinc     15120 Oct 13 03:31 start_atlas.sh
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc         0 Oct 13 03:31 boinc_lockfile
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc      2548 Oct 13 03:31 pandaJob.out
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc    975595 Oct 13 03:35 agis_schedconf.cvmfs.json
[2025-10-13 07:48:06] drwx------. 5 boinc boinc      4096 Oct 13 03:35 pilot3
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc 190665346 Oct 13 07:44 HITS.46676269._071874.pool.root.1
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc       531 Oct 13 07:44 boinc_task_state.xml
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc      1019 Oct 13 07:45 memory_monitor_summary.json
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc   1560580 Oct 13 07:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc    449443 Oct 13 07:45 log.46676269._071874.job.log.tgz.1
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc      7781 Oct 13 07:46 heartbeat.json
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc        95 Oct 13 07:47 pilot_heartbeat.json
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc      8192 Oct 13 07:47 boinc_mmap_file
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc        28 Oct 13 07:47 wrapper_checkpoint.txt
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc      4885 Oct 13 07:48 pilotlog.txt
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc   2020524 Oct 13 07:48 log.46676269._071874.job.log.1
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc       357 Oct 13 07:48 output.list
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc       620 Oct 13 07:48 runtime_log
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc   2488320 Oct 13 07:48 result.tar.gz
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc      8717 Oct 13 07:48 runtime_log.err
[2025-10-13 07:48:06] -rw-------. 1 boinc boinc       656 Oct 13 07:48 ClxKDmuj3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHjiNDmZDuSvn.diag
[2025-10-13 07:48:06] -rw-r--r--. 1 boinc boinc     20621 Oct 13 07:48 stderr.txt
[2025-10-13 07:48:07] HITS file was successfully produced:
[2025-10-13 07:48:07] -rw-------. 1 boinc boinc 190665346 Oct 13 07:44 shared/HITS.pool.root.1
[2025-10-13 07:48:07]  *** Contents of shared directory: ***
[2025-10-13 07:48:07] total 403156
[2025-10-13 07:48:07] -rw-r--r--. 2 boinc boinc 219080105 Oct 13 03:31 ATLAS.root_0
[2025-10-13 07:48:07] -rw-r--r--. 2 boinc boinc    569676 Oct 13 03:31 input.tar.gz
[2025-10-13 07:48:07] -rw-r--r--. 2 boinc boinc     15120 Oct 13 03:31 start_atlas.sh
[2025-10-13 07:48:07] -rw-------. 1 boinc boinc 190665346 Oct 13 07:44 HITS.pool.root.1
[2025-10-13 07:48:07] -rw-------. 1 boinc boinc   2488320 Oct 13 07:48 result.tar.gz
07:48:09 (19541): run_atlas exited; CPU time 54662.633107
07:48:09 (19541): called boinc_finish(0)

</stderr_txt>
]]>

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