Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:35:40 (28088): wrapper (7.7.26015): starting
06:35:40 (28088): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:35:40] Arguments: --nthreads 8
[2025-10-13 06:35:40] Threads: 8
[2025-10-13 06:35:40] Checking for CVMFS
[2025-10-13 06:35:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:35:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:35:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:35:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:35:43] 2.11.2.0 8404 221542 142276 151649 2 60 14820300 25165824 4632 130560 0 123172321 99.891 67615812 4138 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 06:35:43] CVMFS is ok
[2025-10-13 06:35:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:35:43] Checking for apptainer binary...
[2025-10-13 06:35:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:35:43] Running /usr/bin/apptainer --version
[2025-10-13 06:35:43] apptainer version 1.3.2-1.el7
[2025-10-13 06:35:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:35:49] cg-vwn309.simple-grid.lan
[2025-10-13 06:35:49] apptainer works
[2025-10-13 06:35:49] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:35:49] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:35:49] Starting ATLAS job with PandaID=6839866912
[2025-10-13 06:35:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:00:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:00:47] 2025-10-13 08:59:49,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:00:47] 2025-10-13 08:59:49,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:00:47] 2025-10-13 08:59:49,549 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:00:47] 2025-10-13 08:59:49,555 | INFO     | sum of square deviations: 4672638308.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,557 | INFO     | sum of deviations: 71674651994.99994
[2025-10-13 11:00:47] 2025-10-13 08:59:49,557 | INFO     | mean x: 1760338322.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,558 | INFO     | mean y: 2444678.947368421
[2025-10-13 11:00:47] 2025-10-13 08:59:49,558 | INFO     | -- intersect: -26999781538.0475
[2025-10-13 11:00:47] 2025-10-13 08:59:49,558 | INFO     | intersect: -26999781538.0475
[2025-10-13 11:00:47] 2025-10-13 08:59:49,558 | INFO     | chi2: 5.5764731787803825
[2025-10-13 11:00:47] 2025-10-13 08:59:49,559 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 11:00:47] 2025-10-13 08:59:49,561 | INFO     | sum of deviations: 86318266397.50002
[2025-10-13 11:00:47] 2025-10-13 08:59:49,561 | INFO     | mean x: 1760338169.5
[2025-10-13 11:00:47] 2025-10-13 08:59:49,561 | INFO     | mean y: 2452562.4504132234
[2025-10-13 11:00:47] 2025-10-13 08:59:49,561 | INFO     | -- intersect: -34574101532.71394
[2025-10-13 11:00:47] 2025-10-13 08:59:49,562 | INFO     | intersect: -34574101532.71394
[2025-10-13 11:00:47] 2025-10-13 08:59:49,562 | INFO     | chi2: 4.842003003287637
[2025-10-13 11:00:47] 2025-10-13 08:59:49,562 | INFO     | current chi2=4.842003003287637 (change=13.170872555929336 %)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,562 | INFO     | right removable region: 241
[2025-10-13 11:00:47] 2025-10-13 08:59:49,563 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 11:00:47] 2025-10-13 08:59:49,565 | INFO     | sum of deviations: -8942936384.499996
[2025-10-13 11:00:47] 2025-10-13 08:59:49,565 | INFO     | mean x: 1760338474.5
[2025-10-13 11:00:47] 2025-10-13 08:59:49,565 | INFO     | mean y: 2488838.747933884
[2025-10-13 11:00:47] 2025-10-13 08:59:49,565 | INFO     | -- intersect: 3584766265.633946
[2025-10-13 11:00:47] 2025-10-13 08:59:49,565 | INFO     | intersect: 3584766265.633946
[2025-10-13 11:00:47] 2025-10-13 08:59:49,566 | INFO     | chi2: 1.407888927189811
[2025-10-13 11:00:47] 2025-10-13 08:59:49,566 | INFO     | current chi2=1.407888927189811 (change=74.75305839276488 %)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,567 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,569 | INFO     | sum of deviations: -29695597270.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,569 | INFO     | mean x: 1760338627.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,569 | INFO     | mean y: 2500590.4725738396
[2025-10-13 11:00:47] 2025-10-13 08:59:49,569 | INFO     | -- intersect: 12666548751.468716
[2025-10-13 11:00:47] 2025-10-13 08:59:49,569 | INFO     | intersect: 12666548751.468716
[2025-10-13 11:00:47] 2025-10-13 08:59:49,570 | INFO     | chi2: 0.922439214350085
[2025-10-13 11:00:47] 2025-10-13 08:59:49,570 | INFO     | current chi2=0.922439214350085 (change=34.48068263514923 %)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,570 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,573 | INFO     | sum of deviations: -28825297856.500004
[2025-10-13 11:00:47] 2025-10-13 08:59:49,573 | INFO     | mean x: 1760338779.5
[2025-10-13 11:00:47] 2025-10-13 08:59:49,573 | INFO     | mean y: 2500041.7112068967
[2025-10-13 11:00:47] 2025-10-13 08:59:49,573 | INFO     | -- intersect: 13107461566.914932
[2025-10-13 11:00:47] 2025-10-13 08:59:49,573 | INFO     | intersect: 13107461566.914932
[2025-10-13 11:00:47] 2025-10-13 08:59:49,574 | INFO     | chi2: 0.9090514137306562
[2025-10-13 11:00:47] 2025-10-13 08:59:49,574 | INFO     | current chi2=0.9090514137306562 (change=1.4513477323122388 %)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,574 | INFO     | left removable region: 30
[2025-10-13 11:00:47] 2025-10-13 08:59:49,574 | INFO     | sum of square deviations: 2912836010.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,576 | INFO     | sum of deviations: 7594805671.000001
[2025-10-13 11:00:47] 2025-10-13 08:59:49,576 | INFO     | mean x: 1760339054.0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,576 | INFO     | mean y: 2495567.5687203794
[2025-10-13 11:00:47] 2025-10-13 08:59:49,576 | INFO     | -- intersect: -4587338183.560295
[2025-10-13 11:00:47] 2025-10-13 08:59:49,576 | INFO     | intersect: -4587338183.560295
[2025-10-13 11:00:47] 2025-10-13 08:59:49,577 | INFO     | chi2: 0.00022821389646390924
[2025-10-13 11:00:47] 2025-10-13 08:59:49,577 | INFO     | -- intersect: -4587338183.560295
[2025-10-13 11:00:47] 2025-10-13 08:59:49,577 | INFO     | current memory leak: 2.61 B/s (using 211 data points, chi2=0.00)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | ..............................
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . Timing measurements:
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . get job = 0 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . initial setup = 6 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . payload setup = 135 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . stage-in = 0 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . payload execution = 15212 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,578 | INFO     | . stage-out = 3 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,579 | INFO     | . log creation = 1 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,579 | INFO     | ..............................
[2025-10-13 11:00:47] 2025-10-13 08:59:49,906 | INFO     | 
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | job summary report
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | --------------------------------------------------
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | PanDA job id: 6839866912
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | task id: 46676269
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | errors: (none)
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | pilot state: finished 
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | transexitcode: 0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,907 | INFO     | exeerrorcode: 0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | exeerrordiag: 
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | exitcode: 0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | exitmsg: OK
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | cpuconsumptiontime: 55774 s
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | nevents: 400
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | neventsw: 0
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | pid: 6044
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | pgrp: 6044
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | corecount: 8
[2025-10-13 11:00:47] 2025-10-13 08:59:49,908 | INFO     | event service: False
[2025-10-13 11:00:47] 2025-10-13 08:59:49,909 | INFO     | sizes: {0: 2348631, 1: 2348886, 2: 2348886, 12: 2348914, 23: 2348942, 34: 2348970, 44: 2349126, 55: 2349154, 66: 2349182, 77: 2349210, 87: 2349266, 89: 2349836, 98
[2025-10-13 11:00:47] 2025-10-13 08:59:49,909 | INFO     | --------------------------------------------------
[2025-10-13 11:00:47] 2025-10-13 08:59:49,909 | INFO     | 
[2025-10-13 11:00:47] 2025-10-13 08:59:49,909 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-13 11:00:47] 2025-10-13 08:59:50,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:00:47] 2025-10-13 08:59:50,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:00:47] 2025-10-13 08:59:50,296 | INFO     | job 6839866912 has completed (purged errors)
[2025-10-13 11:00:47] 2025-10-13 08:59:50,296 | INFO     | overall cleanup function is called
[2025-10-13 11:00:47] 2025-10-13 08:59:51,305 | INFO     | --- collectZombieJob: --- 10, [6044]
[2025-10-13 11:00:47] 2025-10-13 08:59:51,306 | INFO     | zombie collector waiting for pid 6044
[2025-10-13 11:00:47] 2025-10-13 08:59:51,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:00:47] 2025-10-13 08:59:51,306 | INFO     | collected zombie processes
[2025-10-13 11:00:47] 2025-10-13 08:59:51,306 | INFO     | will attempt to kill all subprocesses of pid=6044
[2025-10-13 11:00:47] 2025-10-13 08:59:51,474 | INFO     | process IDs to be killed: [6044] (in reverse order)
[2025-10-13 11:00:47] 2025-10-13 08:59:52,485 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:00:47] 2025-10-13 08:59:52,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:00:47] 2025-10-13 08:59:52,489 | INFO     | did not find any defunct processes belonging to 6044
[2025-10-13 11:00:47] 2025-10-13 08:59:52,492 | INFO     | did not find any defunct processes belonging to 6044
[2025-10-13 11:00:47] 2025-10-13 08:59:52,492 | INFO     | ready for new job
[2025-10-13 11:00:47] 2025-10-13 08:59:52,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:00:47] 2025-10-13 08:59:52,495 | INFO     | ***************************************
[2025-10-13 11:00:47] 2025-10-13 08:59:52,495 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:00:47] 2025-10-13 08:59:52,495 | INFO     | ***************************************
[2025-10-13 11:00:47] 2025-10-13 08:59:52,495 | INFO     | 
[2025-10-13 11:00:47] 2025-10-13 08:59:52,496 | INFO     | pilot is running in a VM
[2025-10-13 11:00:47] 2025-10-13 08:59:52,496 | INFO     | architecture information:
[2025-10-13 11:00:47] 2025-10-13 08:59:52,512 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:00:47] 2025-10-13 08:59:52,781 | INFO     | cat /etc/os-release:
[2025-10-13 11:00:47] NAME="CentOS Linux"
[2025-10-13 11:00:47] VERSION="7 (Core)"
[2025-10-13 11:00:47] ID="centos"
[2025-10-13 11:00:47] ID_LIKE="rhel fedora"
[2025-10-13 11:00:47] VERSION_ID="7"
[2025-10-13 11:00:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:00:47] ANSI_COLOR="0;31"
[2025-10-13 11:00:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:00:47] HOME_URL="https://www.centos.org/"
[2025-10-13 11:00:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:00:47] 
[2025-10-13 11:00:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:00:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:00:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:00:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:00:47] 
[2025-10-13 11:00:47] 2025-10-13 08:59:52,781 | INFO     | ***************************************
[2025-10-13 11:00:47] 2025-10-13 08:59:53,286 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-13 11:00:47] 2025-10-13 08:59:53,495 | INFO     | sufficient remaining disk space (494910046208 B)
[2025-10-13 11:00:47] 2025-10-13 08:59:53,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:00:47] 2025-10-13 08:59:53,495 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:00:47] 2025-10-13 08:59:53,496 | INFO     | update_server=False
[2025-10-13 11:00:47] 2025-10-13 08:59:53,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:00:47] 2025-10-13 08:59:53,538 | INFO     | all data control threads have been joined
[2025-10-13 11:00:47] 2025-10-13 08:59:53,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:00:47] 2025-10-13 08:59:53,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:00:47] 2025-10-13 08:59:53,933 | INFO     | aborting loop
[2025-10-13 11:00:47] 2025-10-13 08:59:54,299 | INFO     | all job control threads have been joined
[2025-10-13 11:00:47] 2025-10-13 08:59:54,501 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,543 | INFO     | [data] control thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,601 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,603 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:00:47] 2025-10-13 08:59:54,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:00:47] 2025-10-13 08:59:54,860 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,908 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,936 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,938 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:54,963 | INFO     | all payload control threads have been joined
[2025-10-13 11:00:47] 2025-10-13 08:59:55,305 | INFO     | [job] control thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:55,676 | INFO     | [job] validate thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:55,766 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:55,919 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:55,929 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:55,969 | INFO     | [payload] control thread has finished
[2025-10-13 11:00:47] 2025-10-13 08:59:58,741 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:00:47] 2025-10-13 09:00:22,040 | INFO     | PID=31872 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:00:47] 2025-10-13 09:00:22,041 | INFO     | .. there are 9 such processes running
[2025-10-13 11:00:47] 2025-10-13 09:00:22,041 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:00:47] 2025-10-13 09:00:22,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:00:47] 2025-10-13 09:00:22,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:00:47] 2025-10-13 09:00:35,915 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:00:47] 2025-10-13 09:00:37,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753550153536)>', '<ExcThread(monitor, started 139753118750464)>']
[2025-10-13 11:00:47] 2025-10-13 09:00:38,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:00:47] 2025-10-13 09:00:38,138 | INFO     | [monitor] control thread has ended
[2025-10-13 11:00:47] 2025-10-13 09:00:42,951 | INFO     | all workflow threads have been joined
[2025-10-13 11:00:47] 2025-10-13 09:00:42,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:00:47] 2025-10-13 09:00:42,952 | INFO     | traces error code: 0
[2025-10-13 11:00:47] 2025-10-13 09:00:42,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:00:47] 2025-10-13 09:00:43,317 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:00:47] 2025-10-13 09:00:43,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:00:47] 2025-10-13 09:00:43,514 [wrapper] pilotpid: 31872
[2025-10-13 11:00:47] 2025-10-13 09:00:43,603 [wrapper] Pilot exit status: 0
[2025-10-13 11:00:47] 2025-10-13 09:00:44,040 [wrapper] pandaids: 6839866912
[2025-10-13 11:00:47] 2025-10-13 09:00:44,534 [wrapper] cleanup supervisor_pilot 31434 31873
[2025-10-13 11:00:47] 2025-10-13 09:00:44,633 [wrapper] Test setup, not cleaning
[2025-10-13 11:00:47] 2025-10-13 09:00:44,735 [wrapper] apfmon messages muted
[2025-10-13 11:00:47] 2025-10-13 09:00:44,822 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:00:47] 2025-10-13 09:00:44,875 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:00:47]  *** Error codes and diagnostics ***
[2025-10-13 11:00:47]     "exeErrorCode": 0,
[2025-10-13 11:00:47]     "exeErrorDiag": "",
[2025-10-13 11:00:47]     "pilotErrorCode": 0,
[2025-10-13 11:00:47]     "pilotErrorDiag": "",
[2025-10-13 11:00:47]  *** Listing of results directory ***
[2025-10-13 11:00:47] total 419036
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:52 queuedata.json
[2025-10-13 11:00:47] -rwx------. 1 boinc boinc     36292 Oct 12 12:52 runpilot2-wrapper.sh
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc       100 Oct 13 06:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:00:47] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 06:35 run_atlas
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc       105 Oct 13 06:35 job.xml
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc      6388 Oct 13 06:35 init_data.xml
[2025-10-13 11:00:47] -rw-r--r--. 2 boinc boinc 222131140 Oct 13 06:35 EVNT.46676267._003628.pool.root.1
[2025-10-13 11:00:47] -rw-r--r--. 2 boinc boinc     15120 Oct 13 06:35 start_atlas.sh
[2025-10-13 11:00:47] drwxrwx--x. 2 boinc boinc        68 Oct 13 06:35 shared
[2025-10-13 11:00:47] -rw-r--r--. 2 boinc boinc    569680 Oct 13 06:35 input.tar.gz
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc         0 Oct 13 06:35 boinc_lockfile
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc      2550 Oct 13 06:35 pandaJob.out
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc    974365 Oct 13 06:39 agis_schedconf.cvmfs.json
[2025-10-13 11:00:47] drwx------. 5 boinc boinc      4096 Oct 13 06:39 pilot3
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc 197928442 Oct 13 10:56 HITS.46676269._076231.pool.root.1
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc       531 Oct 13 10:56 boinc_task_state.xml
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc      1020 Oct 13 10:58 memory_monitor_summary.json
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc   1560580 Oct 13 10:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc    476200 Oct 13 10:58 log.46676269._076231.job.log.tgz.1
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc        95 Oct 13 10:59 pilot_heartbeat.json
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc      7780 Oct 13 10:59 heartbeat.json
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc      8192 Oct 13 11:00 boinc_mmap_file
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc        28 Oct 13 11:00 wrapper_checkpoint.txt
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc      4885 Oct 13 11:00 pilotlog.txt
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc   2096826 Oct 13 11:00 log.46676269._076231.job.log.1
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc       357 Oct 13 11:00 output.list
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc       620 Oct 13 11:00 runtime_log
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc   2590720 Oct 13 11:00 result.tar.gz
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc      8717 Oct 13 11:00 runtime_log.err
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc       656 Oct 13 11:00 cFDODm5r8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfVjNDmozFU6n.diag
[2025-10-13 11:00:47] -rw-r--r--. 1 boinc boinc     20608 Oct 13 11:00 stderr.txt
[2025-10-13 11:00:47] HITS file was successfully produced:
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc 197928442 Oct 13 10:56 shared/HITS.pool.root.1
[2025-10-13 11:00:47]  *** Contents of shared directory: ***
[2025-10-13 11:00:47] total 413328
[2025-10-13 11:00:47] -rw-r--r--. 2 boinc boinc 222131140 Oct 13 06:35 ATLAS.root_0
[2025-10-13 11:00:47] -rw-r--r--. 2 boinc boinc     15120 Oct 13 06:35 start_atlas.sh
[2025-10-13 11:00:47] -rw-r--r--. 2 boinc boinc    569680 Oct 13 06:35 input.tar.gz
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc 197928442 Oct 13 10:56 HITS.pool.root.1
[2025-10-13 11:00:47] -rw-------. 1 boinc boinc   2590720 Oct 13 11:00 result.tar.gz
11:00:48 (28088): run_atlas exited; CPU time 55990.442220
11:00:48 (28088): called boinc_finish(0)

</stderr_txt>
]]>

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