Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
08:26:30 (1675149): wrapper (7.7.26015): starting
08:26:30 (1675149): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:26:30] Arguments: --nthreads 8
[2025-10-12 08:26:30] Threads: 8
[2025-10-12 08:26:30] Checking for CVMFS
[2025-10-12 08:26:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:26:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:26:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:26:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:26:30] 2.12.7.0 3856927 5495 72400 151623 0 57 2439769 4096001 923 130560 0 16990008 99.997 190225 599 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 08:26:30] CVMFS is ok
[2025-10-12 08:26:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:26:30] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 08:26:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 08:26:30] Further information can be found at the LHC@home message board.
[2025-10-12 08:26:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:26:30] Checking for apptainer binary...
[2025-10-12 08:26:30] apptainer is not installed, using version from CVMFS
[2025-10-12 08:26:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:26:30] painter
[2025-10-12 08:26:30] apptainer works
[2025-10-12 08:26:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:26:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:26:30] Starting ATLAS job with PandaID=6839661099
[2025-10-12 08:26:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:05:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:05:53]  protocol_id=None
[2025-10-12 09:05:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 09:05:53]  replicas=None
[2025-10-12 09:05:53]  scope=mc23_13p6TeV
[2025-10-12 09:05:53]  status=None
[2025-10-12 09:05:53]  status_code=0
[2025-10-12 09:05:53]  storage_token=
[2025-10-12 09:05:53]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839661099/log.46676269._074237.job.log.tgz.1
[2025-10-12 09:05:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/99/log.46676269._074237.job.log.tgz.1
[2025-10-12 09:05:53]  workdir=None
[2025-10-12 09:05:53] ]
[2025-10-12 09:05:53] 2025-10-12 15:04:52,459 | INFO     | transferring file log.46676269._074237.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839661099/log.46676269._074237.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 09:05:53] 2025-10-12 15:04:52,459 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839661099/log.46676269._074237.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-12 09:05:53] 2025-10-12 15:04:52,470 | INFO     | adding to output.list: log.46676269._074237.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/99/log.46676269._074237.job.log.tg
[2025-10-12 09:05:53] 2025-10-12 15:04:52,470 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 09:05:53] 2025-10-12 15:04:52,470 | INFO     | summary of transferred files:
[2025-10-12 09:05:53] 2025-10-12 15:04:52,470 | INFO     |  -- lfn=log.46676269._074237.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 09:05:53] 2025-10-12 15:04:52,470 | INFO     | stage-out finished correctly
[2025-10-12 09:05:53] 2025-10-12 15:04:53,281 | INFO     | time since job start (2290s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 15:04:53,367 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 09:05:53] 2025-10-12 15:04:53,411 | INFO     | job 6839661099 has state=finished
[2025-10-12 09:05:53] 2025-10-12 15:04:53,411 | INFO     | preparing for final server update for job 6839661099 in state='finished'
[2025-10-12 09:05:53] 2025-10-12 15:04:53,412 | INFO     | this job has now completed (state=finished)
[2025-10-12 09:05:53] 2025-10-12 15:04:53,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 09:05:53] 2025-10-12 15:04:53,412 | INFO     | log transfer has been attempted: DONE
[2025-10-12 09:05:53] 2025-10-12 15:04:53,412 | INFO     | job 6839661099 has finished - writing final server update
[2025-10-12 09:05:53] 2025-10-12 15:04:53,412 | INFO     | total number of processed events: 400 (read)
[2025-10-12 09:05:53] 2025-10-12 15:04:53,412 | INFO     | executing command: lscpu
[2025-10-12 09:05:53] 2025-10-12 15:04:53,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 09:05:53] 2025-10-12 15:04:55,287 | INFO     | time since job start (2292s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,432 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 09:05:53] 2025-10-12 15:04:56,435 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4622.051781250001
[2025-10-12 09:05:53] 2025-10-12 15:04:56,437 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839661099/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | INFO     | extracted standard info from prmon json
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | INFO     | sum of square deviations: 9228080.0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,438 | INFO     | sum of deviations: -326531597.0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | mean x: 1760280445.0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | mean y: 2739426.4838709678
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | -- intersect: 62289497329.939476
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | intersect: 62289497329.939476
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | chi2: 0.01074382466218702
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | -- intersect: 62289497329.939476
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | current memory leak: -35.38 B/s (using 31 data points, chi2=0.01)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | could have reported an average CPU frequency of 4643 MHz (5 samples)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | ..............................
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . Timing measurements:
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . get job = 0 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . initial setup = 5 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . payload setup = 4 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . stage-in = 0 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . payload execution = 2266 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . stage-out = 0 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | . log creation = 0 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,439 | INFO     | ..............................
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | 
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | job summary report
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | --------------------------------------------------
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | PanDA job id: 6839661099
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | task id: 46676269
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | errors: (none)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | pilot state: finished 
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | transexitcode: 0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | exeerrorcode: 0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | exeerrordiag: 
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | exitcode: 0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | exitmsg: OK
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | cpuconsumptiontime: 16917 s
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | nevents: 400
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | neventsw: 0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | pid: 1685663
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | pgrp: 1685663
[2025-10-12 09:05:53] 2025-10-12 15:04:56,522 | INFO     | corecount: 8
[2025-10-12 09:05:53] 2025-10-12 15:04:56,523 | INFO     | event service: False
[2025-10-12 09:05:53] 2025-10-12 15:04:56,523 | INFO     | sizes: {0: 2348864, 3: 2349126, 10: 2349154, 2274: 2383305, 2275: 2383305, 2278: 2383531}
[2025-10-12 09:05:53] 2025-10-12 15:04:56,523 | INFO     | --------------------------------------------------
[2025-10-12 09:05:53] 2025-10-12 15:04:56,523 | INFO     | 
[2025-10-12 09:05:53] 2025-10-12 15:04:56,523 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | job 6839661099 has completed (purged errors)
[2025-10-12 09:05:53] 2025-10-12 15:04:56,560 | INFO     | overall cleanup function is called
[2025-10-12 09:05:53] 2025-10-12 15:04:57,433 | WARNING  | process 1685663 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 09:05:53] 2025-10-12 15:04:57,475 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:05:53] 2025-10-12 15:04:57,545 | INFO     | number of running child processes to parent process 1685663: 1
[2025-10-12 09:05:53] 2025-10-12 15:04:57,546 | INFO     | maximum number of monitored processes: 6
[2025-10-12 09:05:53] 2025-10-12 15:04:57,546 | INFO     | aborting job monitoring since job object (job id=6839661099) has expired
[2025-10-12 09:05:53] 2025-10-12 15:04:57,567 | INFO     | --- collectZombieJob: --- 10, [1685663]
[2025-10-12 09:05:53] 2025-10-12 15:04:57,567 | INFO     | zombie collector waiting for pid 1685663
[2025-10-12 09:05:53] 2025-10-12 15:04:57,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:05:53] 2025-10-12 15:04:57,567 | INFO     | collected zombie processes
[2025-10-12 09:05:53] 2025-10-12 15:04:57,567 | INFO     | will attempt to kill all subprocesses of pid=1685663
[2025-10-12 09:05:53] 2025-10-12 15:04:57,623 | INFO     | process IDs to be killed: [1685663] (in reverse order)
[2025-10-12 09:05:53] 2025-10-12 15:04:57,677 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:05:53] 2025-10-12 15:04:57,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:05:53] 2025-10-12 15:04:57,680 | INFO     | did not find any defunct processes belonging to 1685663
[2025-10-12 09:05:53] 2025-10-12 15:04:57,682 | INFO     | did not find any defunct processes belonging to 1685663
[2025-10-12 09:05:53] 2025-10-12 15:04:57,682 | INFO     | ready for new job
[2025-10-12 09:05:53] 2025-10-12 15:04:57,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:05:53] 2025-10-12 15:04:57,683 | INFO     | ***************************************
[2025-10-12 09:05:53] 2025-10-12 15:04:57,683 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:05:53] 2025-10-12 15:04:57,683 | INFO     | ***************************************
[2025-10-12 09:05:53] 2025-10-12 15:04:57,683 | INFO     | 
[2025-10-12 09:05:53] 2025-10-12 15:04:57,684 | INFO     | architecture information:
[2025-10-12 09:05:53] 2025-10-12 15:04:57,684 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:05:53] 2025-10-12 15:04:57,692 | INFO     | cat /etc/os-release:
[2025-10-12 09:05:53] NAME="CentOS Linux"
[2025-10-12 09:05:53] VERSION="7 (Core)"
[2025-10-12 09:05:53] ID="centos"
[2025-10-12 09:05:53] ID_LIKE="rhel fedora"
[2025-10-12 09:05:53] VERSION_ID="7"
[2025-10-12 09:05:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:05:53] ANSI_COLOR="0;31"
[2025-10-12 09:05:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:05:53] HOME_URL="https://www.centos.org/"
[2025-10-12 09:05:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:05:53] 
[2025-10-12 09:05:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:05:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:05:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:05:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:05:53] 
[2025-10-12 09:05:53] 2025-10-12 15:04:57,692 | INFO     | ***************************************
[2025-10-12 09:05:53] 2025-10-12 15:04:58,194 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 09:05:53] 2025-10-12 15:04:58,209 | INFO     | sufficient remaining disk space (190414061568 B)
[2025-10-12 09:05:53] 2025-10-12 15:04:58,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:05:53] 2025-10-12 15:04:58,210 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:05:53] 2025-10-12 15:04:58,210 | INFO     | update_server=False
[2025-10-12 09:05:53] 2025-10-12 15:04:58,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:05:53] 2025-10-12 15:04:58,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 15:04:58,211 | INFO     | will abort loop
[2025-10-12 09:05:53] 2025-10-12 15:04:58,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 15:04:58,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 15:04:58,464 | INFO     | all data control threads have been joined
[2025-10-12 09:05:53] 2025-10-12 15:04:59,214 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,216 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,218 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,233 | INFO     | all job control threads have been joined
[2025-10-12 09:05:53] 2025-10-12 15:04:59,234 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,371 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 15:04:59,469 | INFO     | [data] control thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,538 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:04:59,703 | INFO     | all payload control threads have been joined
[2025-10-12 09:05:53] 2025-10-12 15:05:00,106 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:00,217 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:00,238 | INFO     | [job] control thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:00,535 | INFO     | [job] validate thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:00,601 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:00,669 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:00,708 | INFO     | [payload] control thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:03,424 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:08,261 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:05:53] 2025-10-12 15:05:09,266 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:05:53] 2025-10-12 15:05:28,443 | INFO     | PID=1678995 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:05:53] 2025-10-12 15:05:28,443 | INFO     | .. there are 2 such processes running
[2025-10-12 09:05:53] 2025-10-12 15:05:28,443 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:05:53] 2025-10-12 15:05:28,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:05:53] 2025-10-12 15:05:28,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:05:53] 2025-10-12 15:05:47,110 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:05:53] 2025-10-12 15:05:48,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136581665269568)>', '<ExcThread(monitor, started 136581258151680)>']
[2025-10-12 09:05:53] 2025-10-12 15:05:48,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:05:53] 2025-10-12 15:05:48,533 | INFO     | [monitor] control thread has ended
[2025-10-12 09:05:53] 2025-10-12 15:05:53,251 | INFO     | all workflow threads have been joined
[2025-10-12 09:05:53] 2025-10-12 15:05:53,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:05:53] 2025-10-12 15:05:53,251 | INFO     | traces error code: 0
[2025-10-12 09:05:53] 2025-10-12 15:05:53,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:05:53] 2025-10-12 15:05:53,314 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:05:53] 2025-10-12 15:05:53,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:05:53] 2025-10-12 15:05:53,320 [wrapper] pilotpid: 1678995
[2025-10-12 09:05:53] 2025-10-12 15:05:53,322 [wrapper] Pilot exit status: 0
[2025-10-12 09:05:53] 2025-10-12 15:05:53,331 [wrapper] pandaids: 6839661099
[2025-10-12 09:05:53] 2025-10-12 15:05:53,382 [wrapper] cleanup supervisor_pilot 1712105 1678996
[2025-10-12 09:05:53] 2025-10-12 15:05:53,386 [wrapper] Test setup, not cleaning
[2025-10-12 09:05:53] 2025-10-12 15:05:53,390 [wrapper] apfmon messages muted
[2025-10-12 09:05:53] 2025-10-12 15:05:53,393 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:05:53] 2025-10-12 15:05:53,396 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:05:53]  *** Error codes and diagnostics ***
[2025-10-12 09:05:53]     "exeErrorCode": 0,
[2025-10-12 09:05:53]     "exeErrorDiag": "",
[2025-10-12 09:05:53]     "pilotErrorCode": 0,
[2025-10-12 09:05:53]     "pilotErrorDiag": "",
[2025-10-12 09:05:53]  *** Listing of results directory ***
[2025-10-12 09:05:53] total 415800
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 01:58 pilot3.tar.gz
[2025-10-12 09:05:53] -rwx------ 1 boinc boinc     36292 Oct 12 02:29 runpilot2-wrapper.sh
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:29 queuedata.json
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       100 Oct 12 08:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:05:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 08:26 run_atlas
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       105 Oct 12 08:26 job.xml
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:26 start_atlas.sh
[2025-10-12 09:05:53] drwxrwx--x 2 boinc boinc      4096 Oct 12 08:26 shared
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc    569674 Oct 12 08:26 input.tar.gz
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      9979 Oct 12 08:26 init_data.xml
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc 219749484 Oct 12 08:26 EVNT.46676267._003532.pool.root.1
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:26 boinc_lockfile
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      2550 Oct 12 08:26 pandaJob.out
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    975528 Oct 12 08:26 agis_schedconf.cvmfs.json
[2025-10-12 09:05:53] -rw------- 1 boinc boinc   1560580 Oct 12 08:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:05:53] drwx------ 5 boinc boinc      4096 Oct 12 08:26 pilot3
[2025-10-12 09:05:53] -rw------- 1 boinc boinc 200764002 Oct 12 09:04 HITS.46676269._074237.pool.root.1
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       529 Oct 12 09:04 boinc_task_state.xml
[2025-10-12 09:05:53] -rw------- 1 boinc boinc      1022 Oct 12 09:04 memory_monitor_summary.json
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    304709 Oct 12 09:04 log.46676269._074237.job.log.tgz.1
[2025-10-12 09:05:53] -rw------- 1 boinc boinc        95 Oct 12 09:04 pilot_heartbeat.json
[2025-10-12 09:05:53] -rw------- 1 boinc boinc      7735 Oct 12 09:04 heartbeat.json
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:05 boinc_mmap_file
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:05 wrapper_checkpoint.txt
[2025-10-12 09:05:53] -rw------- 1 boinc boinc      4905 Oct 12 09:05 pilotlog.txt
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    373853 Oct 12 09:05 log.46676269._074237.job.log.1
[2025-10-12 09:05:53] -rw------- 1 boinc boinc       357 Oct 12 09:05 output.list
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:05 runtime_log
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    696320 Oct 12 09:05 result.tar.gz
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      8794 Oct 12 09:05 runtime_log.err
[2025-10-12 09:05:53] -rw------- 1 boinc boinc       654 Oct 12 09:05 FncNDmEd6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU8iNDmPyxVRm.diag
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc     21849 Oct 12 09:05 stderr.txt
[2025-10-12 09:05:53] HITS file was successfully produced:
[2025-10-12 09:05:53] -rw------- 1 boinc boinc 200764002 Oct 12 09:04 shared/HITS.pool.root.1
[2025-10-12 09:05:53]  *** Contents of shared directory: ***
[2025-10-12 09:05:53] total 411924
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:26 start_atlas.sh
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc    569674 Oct 12 08:26 input.tar.gz
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc 219749484 Oct 12 08:26 ATLAS.root_0
[2025-10-12 09:05:53] -rw------- 1 boinc boinc 200764002 Oct 12 09:04 HITS.pool.root.1
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    696320 Oct 12 09:05 result.tar.gz
09:05:54 (1675149): run_atlas exited; CPU time 16917.994970
09:05:54 (1675149): called boinc_finish(0)

</stderr_txt>
]]>

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