Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:33:37 (3229465): wrapper (7.7.26015): starting
05:33:37 (3229465): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 05:33:37] Arguments: --nthreads 12
[2025-10-12 05:33:37] Threads: 12
[2025-10-12 05:33:37] Checking for CVMFS
[2025-10-12 05:33:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:33:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:33:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:33:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:33:39] 2.11.5.0 2582 31462 201192 151620 1 416 25898279 45568000 23500 130560 0 339472301 99.889 117777111 8622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 05:33:39] CVMFS is ok
[2025-10-12 05:33:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:33:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:33:39] Further information can be found at the LHC@home message board.
[2025-10-12 05:33:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:33:39] Checking for apptainer binary...
[2025-10-12 05:33:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:33:39] Running /usr/bin/apptainer --version
[2025-10-12 05:33:39] apptainer version 1.4.1-1.el9
[2025-10-12 05:33:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:33:40] wns0047.triumf.lcg
[2025-10-12 05:33:40] apptainer works
[2025-10-12 05:33:40] Set ATHENA_PROC_NUMBER=12
[2025-10-12 05:33:40] Set ATHENA_CORE_NUMBER=12
[2025-10-12 05:33:41] Starting ATLAS job with PandaID=6839866880
[2025-10-12 05:33:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:40:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:40:26] 2025-10-12 12:39:22,420 | WARNING  | wrong length of table data, x=[1760272573.0], y=[2191.0] (must be same and length>=4)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,420 | INFO     | could have reported an average CPU frequency of 2680 MHz (4 samples)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | ..............................
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . Timing measurements:
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . get job = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . initial setup = 3 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . payload setup = 29 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . stage-in = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . payload execution = 64 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . stage-out = 1 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . log creation = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | ..............................
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839866880/pilotlog.txt
[2025-10-12 05:40:26] 2025-10-12 12:39:22,523 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 05:40:26] - Log from pilotlog.txt -
[2025-10-12 05:40:26] 2025-10-12 12:39:22,417 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839866880/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | INFO     | extracted standard info from prmon json
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:40:26] 2025-10-12 12:39:22,420 | WARNING  | wrong length of table data, x=[1760272573.0], y=[2191.0] (must be same and length>=4)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,420 | INFO     | could have reported an average CPU frequency of 2680 MHz (4 samples)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | ..............................
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . Timing measurements:
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . get job = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . initial setup = 3 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . payload setup = 29 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . stage-in = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . payload execution = 64 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . stage-out = 1 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . log creation = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | ..............................
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839866880/pilotlog.txt
[2025-10-12 05:40:26] 2025-10-12 12:39:22,523 | WARNING  | 
[2025-10-12 05:40:26] [begin log extracts]
[2025-10-12 05:40:26] - Log from pilotlog.txt -
[2025-10-12 05:40:26] 2025-10-12 12:39:22,417 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839866880/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | INFO     | extracted standard info from prmon json
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:40:26] 2025-10-12 12:39:22,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:40:26] 2025-10-12 12:39:22,420 | WARNING  | wrong length of table data, x=[1760272573.0], y=[2191.0] (must be same and length>=4)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,420 | INFO     | could have reported an average CPU frequency of 2680 MHz (4 samples)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | ..............................
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . Timing measurements:
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . get job = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . initial setup = 3 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . payload setup = 29 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . stage-in = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . payload execution = 64 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . stage-out = 1 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | . log creation = 0 s
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | ..............................
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 05:40:26] 2025-10-12 12:39:22,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839866880/pilotlog.txt
[2025-10-12 05:40:26] [end log extracts]
[2025-10-12 05:40:26] 2025-10-12 12:39:22,544 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 05:40:26] 2025-10-12 12:39:22,545 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | 
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | job summary report
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | --------------------------------------------------
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | PanDA job id: 6839866880
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | task id: 46676269
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 05:36:35,717 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | pilot state: failed 
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | transexitcode: 65
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | exeerrorcode: 65
[2025-10-12 05:40:26] 2025-10-12 12:39:23,449 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | exitcode: 65
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | nevents: 0
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | neventsw: 0
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | pid: 3240212
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | pgrp: 3240212
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | corecount: 12
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | event service: False
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | sizes: {0: 2348739, 1: 2348881, 12: 2348881, 23: 2348909, 26: 2349199, 34: 2349227, 98: 2372567, 100: 2376859, 103: 2376887, 252: 2377053}
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | --------------------------------------------------
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | 
[2025-10-12 05:40:26] 2025-10-12 12:39:23,450 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 05:40:26] 2025-10-12 12:39:23,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:40:26] 2025-10-12 12:39:23,593 | INFO     | job 6839866880 has completed (purged errors)
[2025-10-12 05:40:26] 2025-10-12 12:39:23,593 | INFO     | overall cleanup function is called
[2025-10-12 05:40:26] 2025-10-12 12:39:24,600 | INFO     | --- collectZombieJob: --- 10, [3240212]
[2025-10-12 05:40:26] 2025-10-12 12:39:24,600 | INFO     | zombie collector waiting for pid 3240212
[2025-10-12 05:40:26] 2025-10-12 12:39:24,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:40:26] 2025-10-12 12:39:24,600 | INFO     | collected zombie processes
[2025-10-12 05:40:26] 2025-10-12 12:39:24,600 | INFO     | will attempt to kill all subprocesses of pid=3240212
[2025-10-12 05:40:26] 2025-10-12 12:39:25,000 | INFO     | process IDs to be killed: [3240212] (in reverse order)
[2025-10-12 05:40:26] 2025-10-12 12:39:25,081 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:40:26] 2025-10-12 12:39:25,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:40:26] 2025-10-12 12:39:25,111 | INFO     | did not find any defunct processes belonging to 3240212
[2025-10-12 05:40:26] 2025-10-12 12:39:25,120 | INFO     | did not find any defunct processes belonging to 3240212
[2025-10-12 05:40:26] 2025-10-12 12:39:25,121 | INFO     | ready for new job
[2025-10-12 05:40:26] 2025-10-12 12:39:25,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:40:26] 2025-10-12 12:39:25,122 | INFO     | ***************************************
[2025-10-12 05:40:26] 2025-10-12 12:39:25,122 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:40:26] 2025-10-12 12:39:25,122 | INFO     | ***************************************
[2025-10-12 05:40:26] 2025-10-12 12:39:25,122 | INFO     | 
[2025-10-12 05:40:26] 2025-10-12 12:39:25,124 | INFO     | architecture information:
[2025-10-12 05:40:26] 2025-10-12 12:39:25,124 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:40:26] 2025-10-12 12:39:25,150 | INFO     | cat /etc/os-release:
[2025-10-12 05:40:26] NAME="CentOS Linux"
[2025-10-12 05:40:26] VERSION="7 (Core)"
[2025-10-12 05:40:26] ID="centos"
[2025-10-12 05:40:26] ID_LIKE="rhel fedora"
[2025-10-12 05:40:26] VERSION_ID="7"
[2025-10-12 05:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:40:26] ANSI_COLOR="0;31"
[2025-10-12 05:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:40:26] HOME_URL="https://www.centos.org/"
[2025-10-12 05:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:40:26] 
[2025-10-12 05:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:40:26] 
[2025-10-12 05:40:26] 2025-10-12 12:39:25,151 | INFO     | ***************************************
[2025-10-12 05:40:26] 2025-10-12 12:39:25,654 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 05:40:26] 2025-10-12 12:39:25,670 | INFO     | sufficient remaining disk space (1818076643328 B)
[2025-10-12 05:40:26] 2025-10-12 12:39:25,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:40:26] 2025-10-12 12:39:25,671 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:40:26] 2025-10-12 12:39:25,671 | INFO     | update_server=False
[2025-10-12 05:40:26] 2025-10-12 12:39:25,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:40:26] 2025-10-12 12:39:25,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:40:26] 2025-10-12 12:39:25,871 | INFO     | all payload control threads have been joined
[2025-10-12 05:40:26] 2025-10-12 12:39:25,884 | INFO     | all job control threads have been joined
[2025-10-12 05:40:26] 2025-10-12 12:39:25,907 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 05:40:26] 2025-10-12 12:39:25,908 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 05:40:26] 2025-10-12 12:39:25,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:40:26] 2025-10-12 12:39:25,908 | INFO     | will abort loop
[2025-10-12 05:40:26] 2025-10-12 12:39:26,465 | INFO     | all data control threads have been joined
[2025-10-12 05:40:26] 2025-10-12 12:39:26,677 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:26,877 | INFO     | [payload] control thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:26,890 | INFO     | [job] control thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:26,914 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,363 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,471 | INFO     | [data] control thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,548 | INFO     | [job] validate thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,687 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,778 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,898 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:27,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:40:26] 2025-10-12 12:39:27,989 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:28,119 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:28,262 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:28,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:40:26] 2025-10-12 12:39:28,986 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:32,957 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:40:26] 2025-10-12 12:39:56,386 | INFO     | PID=3233300 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:40:26] 2025-10-12 12:39:56,398 | INFO     | .. there are 42 such processes running
[2025-10-12 05:40:26] 2025-10-12 12:39:56,398 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:40:26] 2025-10-12 12:39:56,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:40:26] 2025-10-12 12:39:56,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:40:26] 2025-10-12 12:40:17,948 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:40:26] 2025-10-12 12:40:19,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291396118336)>', '<ExcThread(monitor, started 140290828506880)>']
[2025-10-12 05:40:26] 2025-10-12 12:40:20,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:40:26] 2025-10-12 12:40:20,544 | INFO     | [monitor] control thread has ended
[2025-10-12 05:40:26] 2025-10-12 12:40:24,796 | INFO     | all workflow threads have been joined
[2025-10-12 05:40:26] 2025-10-12 12:40:24,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:40:26] 2025-10-12 12:40:24,802 | INFO     | traces error code: 0
[2025-10-12 05:40:26] 2025-10-12 12:40:24,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:40:26] 2025-10-12 12:40:25,213 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:40:26] 2025-10-12 12:40:25,244 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:40:26] 2025-10-12 12:40:25,281 [wrapper] pilotpid: 3233300
[2025-10-12 05:40:26] 2025-10-12 12:40:25,297 [wrapper] Pilot exit status: 0
[2025-10-12 05:40:26] 2025-10-12 12:40:25,343 [wrapper] pandaids: 6839866880
[2025-10-12 05:40:26] 2025-10-12 12:40:25,766 [wrapper] cleanup supervisor_pilot 3233306 3233301
[2025-10-12 05:40:26] 2025-10-12 12:40:25,783 [wrapper] Test setup, not cleaning
[2025-10-12 05:40:26] 2025-10-12 12:40:25,799 [wrapper] apfmon messages muted
[2025-10-12 05:40:26] 2025-10-12 12:40:25,813 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:40:26] 2025-10-12 12:40:25,837 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:40:26]  *** Error codes and diagnostics ***
[2025-10-12 05:40:26]     "exeErrorCode": 65,
[2025-10-12 05:40:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 05:40:26]     "pilotErrorCode": 1305,
[2025-10-12 05:40:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 05:40:26]  *** Listing of results directory ***
[2025-10-12 05:40:26] total 217280
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc    557409 Oct 12 03:38 pilot3.tar.gz
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc      5112 Oct 12 03:48 queuedata.json
[2025-10-12 05:40:26] -rwx------. 1 boinc boinc     36292 Oct 12 03:49 runpilot2-wrapper.sh
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc       100 Oct 12 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:40:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 05:33 run_atlas
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc       105 Oct 12 05:33 job.xml
[2025-10-12 05:40:26] -rw-r--r--. 2 boinc boinc 218345700 Oct 12 05:33 EVNT.46676267._003627.pool.root.1
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc      6594 Oct 12 05:33 init_data.xml
[2025-10-12 05:40:26] -rw-r--r--. 2 boinc boinc     15120 Oct 12 05:33 start_atlas.sh
[2025-10-12 05:40:26] drwxrwx--x. 2 boinc boinc      4096 Oct 12 05:33 shared
[2025-10-12 05:40:26] -rw-r--r--. 2 boinc boinc    569683 Oct 12 05:33 input.tar.gz
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc         0 Oct 12 05:33 boinc_lockfile
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc      2549 Oct 12 05:33 pandaJob.out
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc    975512 Oct 12 05:34 agis_schedconf.cvmfs.json
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc   1560580 Oct 12 05:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:40:26] drwx------. 5 boinc boinc      4096 Oct 12 05:34 pilot3
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc       962 Oct 12 05:36 memory_monitor_summary.json
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc     22397 Oct 12 05:36 log.46676269._076199.job.log.tgz.1
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc        95 Oct 12 05:39 pilot_heartbeat.json
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc      8410 Oct 12 05:39 heartbeat.json
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc       523 Oct 12 05:40 boinc_task_state.xml
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc      8192 Oct 12 05:40 boinc_mmap_file
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc        22 Oct 12 05:40 wrapper_checkpoint.txt
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc      5009 Oct 12 05:40 pilotlog.txt
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc     97327 Oct 12 05:40 log.46676269._076199.job.log.1
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc       188 Oct 12 05:40 output.list
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc       620 Oct 12 05:40 runtime_log
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc    143360 Oct 12 05:40 result.tar.gz
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc      8528 Oct 12 05:40 runtime_log.err
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc       644 Oct 12 05:40 IA6NDmpo8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8TjNDmJLsCRo.diag
[2025-10-12 05:40:26] -rw-r--r--. 1 boinc boinc     21848 Oct 12 05:40 stderr.txt
[2025-10-12 05:40:26] No HITS result produced
[2025-10-12 05:40:26]  *** Contents of shared directory: ***
[2025-10-12 05:40:26] total 213952
[2025-10-12 05:40:26] -rw-r--r--. 2 boinc boinc 218345700 Oct 12 05:33 ATLAS.root_0
[2025-10-12 05:40:26] -rw-r--r--. 2 boinc boinc     15120 Oct 12 05:33 start_atlas.sh
[2025-10-12 05:40:26] -rw-r--r--. 2 boinc boinc    569683 Oct 12 05:33 input.tar.gz
[2025-10-12 05:40:26] -rw-------. 1 boinc boinc    143360 Oct 12 05:40 result.tar.gz
05:40:27 (3229465): run_atlas exited; CPU time 32.297677
05:40:27 (3229465): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN