Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:31:58 (15759): wrapper (7.7.26015): starting
14:31:58 (15759): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:31:58] Arguments: --nthreads 8
[2025-10-12 14:31:58] Threads: 8
[2025-10-12 14:31:58] Checking for CVMFS
[2025-10-12 14:31:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:32:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:32:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:32:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:32:03] 2.11.2.0 17493 22930 78104 151620 2 171 20734179 25165824 4585 130560 0 6877444 99.911 2809880 1488 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 14:32:03] CVMFS is ok
[2025-10-12 14:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:32:03] Checking for apptainer binary...
[2025-10-12 14:32:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:32:03] Running /usr/bin/apptainer --version
[2025-10-12 14:32:03] apptainer version 1.3.2-1.el7
[2025-10-12 14:32:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:32:08] cg-vwn341.simple-grid.lan
[2025-10-12 14:32:08] apptainer works
[2025-10-12 14:32:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:32:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:32:08] Starting ATLAS job with PandaID=6839660087
[2025-10-12 14:32:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:46:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:46:11] 2025-10-12 16:45:20,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:46:11] 2025-10-12 16:45:20,146 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:46:11] 2025-10-12 16:45:20,146 | INFO     | sum of square deviations: 4075741535.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,148 | INFO     | sum of deviations: 89175338769.5
[2025-10-12 18:46:11] 2025-10-12 16:45:20,149 | INFO     | mean x: 1760280184.5
[2025-10-12 18:46:11] 2025-10-12 16:45:20,149 | INFO     | mean y: 2433202.055084746
[2025-10-12 18:46:11] 2025-10-12 16:45:20,149 | INFO     | -- intersect: -38511682679.443146
[2025-10-12 18:46:11] 2025-10-12 16:45:20,149 | INFO     | intersect: -38511682679.443146
[2025-10-12 18:46:11] 2025-10-12 16:45:20,149 | INFO     | chi2: 7.221625677674167
[2025-10-12 18:46:11] 2025-10-12 16:45:20,150 | INFO     | sum of square deviations: 3822136780.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,152 | INFO     | sum of deviations: 102762894088.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,152 | INFO     | mean x: 1760280032.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,152 | INFO     | mean y: 2441210.878787879
[2025-10-12 18:46:11] 2025-10-12 16:45:20,152 | INFO     | -- intersect: -47324873562.41335
[2025-10-12 18:46:11] 2025-10-12 16:45:20,152 | INFO     | intersect: -47324873562.41335
[2025-10-12 18:46:11] 2025-10-12 16:45:20,153 | INFO     | chi2: 6.512468487578335
[2025-10-12 18:46:11] 2025-10-12 16:45:20,153 | INFO     | current chi2=6.512468487578335 (change=9.819910664827294 %)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,153 | INFO     | right removable region: 230
[2025-10-12 18:46:11] 2025-10-12 16:45:20,153 | INFO     | sum of square deviations: 3822136780.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,155 | INFO     | sum of deviations: 8326440098.000013
[2025-10-12 18:46:11] 2025-10-12 16:45:20,155 | INFO     | mean x: 1760280337.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,155 | INFO     | mean y: 2481779.662337662
[2025-10-12 18:46:11] 2025-10-12 16:45:20,156 | INFO     | -- intersect: -3832249844.3895297
[2025-10-12 18:46:11] 2025-10-12 16:45:20,156 | INFO     | intersect: -3832249844.3895297
[2025-10-12 18:46:11] 2025-10-12 16:45:20,156 | INFO     | chi2: 2.4385060211725955
[2025-10-12 18:46:11] 2025-10-12 16:45:20,156 | INFO     | current chi2=2.4385060211725955 (change=66.23328139657949 %)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,157 | INFO     | sum of square deviations: 3579276412.5
[2025-10-12 18:46:11] 2025-10-12 16:45:20,162 | INFO     | sum of deviations: -33173722689.499992
[2025-10-12 18:46:11] 2025-10-12 16:45:20,163 | INFO     | mean x: 1760280489.5
[2025-10-12 18:46:11] 2025-10-12 16:45:20,163 | INFO     | mean y: 2507684.048672566
[2025-10-12 18:46:11] 2025-10-12 16:45:20,163 | INFO     | -- intersect: 16317273598.878756
[2025-10-12 18:46:11] 2025-10-12 16:45:20,163 | INFO     | intersect: 16317273598.878756
[2025-10-12 18:46:11] 2025-10-12 16:45:20,163 | INFO     | chi2: 0.9556093466939906
[2025-10-12 18:46:11] 2025-10-12 16:45:20,164 | INFO     | current chi2=0.9556093466939906 (change=60.81168804190731 %)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,164 | INFO     | sum of square deviations: 3346927870.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,166 | INFO     | sum of deviations: -32052374238.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,166 | INFO     | mean x: 1760280642.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,166 | INFO     | mean y: 2506898.108597285
[2025-10-12 18:46:11] 2025-10-12 16:45:20,166 | INFO     | -- intersect: 16860107686.885351
[2025-10-12 18:46:11] 2025-10-12 16:45:20,166 | INFO     | intersect: 16860107686.885351
[2025-10-12 18:46:11] 2025-10-12 16:45:20,167 | INFO     | chi2: 0.9280696135676396
[2025-10-12 18:46:11] 2025-10-12 16:45:20,167 | INFO     | current chi2=0.9280696135676396 (change=2.8819028635107977 %)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,167 | INFO     | left removable region: 30
[2025-10-12 18:46:11] 2025-10-12 16:45:20,167 | INFO     | sum of square deviations: 2480604650.0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,169 | INFO     | sum of deviations: 5959535757.499999
[2025-10-12 18:46:11] 2025-10-12 16:45:20,169 | INFO     | mean x: 1760280916.5
[2025-10-12 18:46:11] 2025-10-12 16:45:20,169 | INFO     | mean y: 2499854.415
[2025-10-12 18:46:11] 2025-10-12 16:45:20,169 | INFO     | -- intersect: -4226492083.146118
[2025-10-12 18:46:11] 2025-10-12 16:45:20,169 | INFO     | intersect: -4226492083.146118
[2025-10-12 18:46:11] 2025-10-12 16:45:20,170 | INFO     | chi2: 0.013526457242724743
[2025-10-12 18:46:11] 2025-10-12 16:45:20,170 | INFO     | -- intersect: -4226492083.146118
[2025-10-12 18:46:11] 2025-10-12 16:45:20,170 | INFO     | current memory leak: 2.40 B/s (using 200 data points, chi2=0.01)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,171 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,171 | INFO     | ..............................
[2025-10-12 18:46:11] 2025-10-12 16:45:20,171 | INFO     | . Timing measurements:
[2025-10-12 18:46:11] 2025-10-12 16:45:20,171 | INFO     | . get job = 0 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,171 | INFO     | . initial setup = 6 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,171 | INFO     | . payload setup = 128 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,172 | INFO     | . stage-in = 0 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,172 | INFO     | . payload execution = 14558 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,172 | INFO     | . stage-out = 9 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,172 | INFO     | . log creation = 1 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,172 | INFO     | ..............................
[2025-10-12 18:46:11] 2025-10-12 16:45:20,280 | INFO     | time since job start (14983s) is within the limit (172800.0s)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,336 | INFO     | 
[2025-10-12 18:46:11] 2025-10-12 16:45:20,336 | INFO     | job summary report
[2025-10-12 18:46:11] 2025-10-12 16:45:20,336 | INFO     | --------------------------------------------------
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | PanDA job id: 6839660087
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | task id: 46676269
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | errors: (none)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | pilot state: finished 
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | transexitcode: 0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | exeerrorcode: 0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | exeerrordiag: 
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | exitcode: 0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | exitmsg: OK
[2025-10-12 18:46:11] 2025-10-12 16:45:20,337 | INFO     | cpuconsumptiontime: 53752 s
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | nevents: 400
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | neventsw: 0
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | pid: 26434
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | pgrp: 26434
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | corecount: 8
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | event service: False
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | sizes: {0: 2348029, 1: 2348715, 2: 2348914, 13: 2348914, 24: 2348970, 34: 2348998, 45: 2349154, 56: 2349182, 66: 2349210, 77: 2349238, 87: 2349556, 88: 2349864, 14
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | --------------------------------------------------
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | 
[2025-10-12 18:46:11] 2025-10-12 16:45:20,338 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-10-12 18:46:11] 2025-10-12 16:45:20,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | job 6839660087 has completed (purged errors)
[2025-10-12 18:46:11] 2025-10-12 16:45:20,689 | INFO     | overall cleanup function is called
[2025-10-12 18:46:11] 2025-10-12 16:45:21,703 | INFO     | --- collectZombieJob: --- 10, [26434]
[2025-10-12 18:46:11] 2025-10-12 16:45:21,704 | INFO     | zombie collector waiting for pid 26434
[2025-10-12 18:46:11] 2025-10-12 16:45:21,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:46:11] 2025-10-12 16:45:21,704 | INFO     | collected zombie processes
[2025-10-12 18:46:11] 2025-10-12 16:45:21,704 | INFO     | will attempt to kill all subprocesses of pid=26434
[2025-10-12 18:46:11] 2025-10-12 16:45:21,827 | INFO     | process IDs to be killed: [26434] (in reverse order)
[2025-10-12 18:46:11] 2025-10-12 16:45:22,483 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:46:11] 2025-10-12 16:45:22,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:46:11] 2025-10-12 16:45:22,487 | INFO     | did not find any defunct processes belonging to 26434
[2025-10-12 18:46:11] 2025-10-12 16:45:22,490 | INFO     | did not find any defunct processes belonging to 26434
[2025-10-12 18:46:11] 2025-10-12 16:45:22,490 | INFO     | ready for new job
[2025-10-12 18:46:11] 2025-10-12 16:45:22,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:46:11] 2025-10-12 16:45:22,492 | INFO     | ***************************************
[2025-10-12 18:46:11] 2025-10-12 16:45:22,493 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:46:11] 2025-10-12 16:45:22,493 | INFO     | ***************************************
[2025-10-12 18:46:11] 2025-10-12 16:45:22,493 | INFO     | 
[2025-10-12 18:46:11] 2025-10-12 16:45:22,493 | INFO     | pilot is running in a VM
[2025-10-12 18:46:11] 2025-10-12 16:45:22,493 | INFO     | architecture information:
[2025-10-12 18:46:11] 2025-10-12 16:45:22,508 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:46:11] 2025-10-12 16:45:22,695 | INFO     | cat /etc/os-release:
[2025-10-12 18:46:11] NAME="CentOS Linux"
[2025-10-12 18:46:11] VERSION="7 (Core)"
[2025-10-12 18:46:11] ID="centos"
[2025-10-12 18:46:11] ID_LIKE="rhel fedora"
[2025-10-12 18:46:11] VERSION_ID="7"
[2025-10-12 18:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:46:11] ANSI_COLOR="0;31"
[2025-10-12 18:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:46:11] HOME_URL="https://www.centos.org/"
[2025-10-12 18:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:46:11] 
[2025-10-12 18:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:46:11] 
[2025-10-12 18:46:11] 2025-10-12 16:45:22,695 | INFO     | ***************************************
[2025-10-12 18:46:11] 2025-10-12 16:45:23,200 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-10-12 18:46:11] 2025-10-12 16:45:23,477 | INFO     | sufficient remaining disk space (495980642304 B)
[2025-10-12 18:46:11] 2025-10-12 16:45:23,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:46:11] 2025-10-12 16:45:23,478 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:46:11] 2025-10-12 16:45:23,478 | INFO     | update_server=False
[2025-10-12 18:46:11] 2025-10-12 16:45:23,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:46:11] 2025-10-12 16:45:23,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:46:11] 2025-10-12 16:45:23,479 | INFO     | aborting loop
[2025-10-12 18:46:11] 2025-10-12 16:45:23,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:46:11] 2025-10-12 16:45:23,851 | INFO     | all data control threads have been joined
[2025-10-12 18:46:11] 2025-10-12 16:45:24,019 | INFO     | all payload control threads have been joined
[2025-10-12 18:46:11] 2025-10-12 16:45:24,484 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:24,485 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:24,543 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:24,822 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:24,857 | INFO     | [data] control thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:24,876 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,025 | INFO     | [payload] control thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,100 | INFO     | all job control threads have been joined
[2025-10-12 18:46:11] 2025-10-12 16:45:25,116 | INFO     | [job] validate thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:46:11] 2025-10-12 16:45:25,487 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,547 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,726 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,765 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:25,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:26,106 | INFO     | [job] control thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:26,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:46:11] 2025-10-12 16:45:26,356 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:30,207 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:46:11] 2025-10-12 16:45:53,479 | INFO     | PID=19874 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:46:11] 2025-10-12 16:45:53,479 | INFO     | .. there are 9 such processes running
[2025-10-12 18:46:11] 2025-10-12 16:45:53,481 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:46:11] 2025-10-12 16:45:53,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:46:11] 2025-10-12 16:45:53,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:46:11] 2025-10-12 16:46:02,696 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:46:11] 2025-10-12 16:46:02,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465218955072)>', '<ExcThread(monitor, started 140464447530752)>']
[2025-10-12 18:46:11] 2025-10-12 16:46:03,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:46:11] 2025-10-12 16:46:03,546 | INFO     | [monitor] control thread has ended
[2025-10-12 18:46:11] 2025-10-12 16:46:07,802 | INFO     | all workflow threads have been joined
[2025-10-12 18:46:11] 2025-10-12 16:46:07,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:46:11] 2025-10-12 16:46:07,803 | INFO     | traces error code: 0
[2025-10-12 18:46:11] 2025-10-12 16:46:07,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:46:11] 2025-10-12 16:46:08,182 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:46:11] 2025-10-12 16:46:08,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:46:11] 2025-10-12 16:46:08,290 [wrapper] pilotpid: 19874
[2025-10-12 18:46:11] 2025-10-12 16:46:08,342 [wrapper] Pilot exit status: 0
[2025-10-12 18:46:11] 2025-10-12 16:46:08,804 [wrapper] pandaids: 6839660087
[2025-10-12 18:46:11] 2025-10-12 16:46:09,755 [wrapper] cleanup supervisor_pilot  3629 19875
[2025-10-12 18:46:11] 2025-10-12 16:46:09,853 [wrapper] Test setup, not cleaning
[2025-10-12 18:46:11] 2025-10-12 16:46:09,984 [wrapper] apfmon messages muted
[2025-10-12 18:46:11] 2025-10-12 16:46:10,092 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:46:11] 2025-10-12 16:46:10,209 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:46:11]  *** Error codes and diagnostics ***
[2025-10-12 18:46:11]     "exeErrorCode": 0,
[2025-10-12 18:46:11]     "exeErrorDiag": "",
[2025-10-12 18:46:11]     "pilotErrorCode": 0,
[2025-10-12 18:46:11]     "pilotErrorDiag": "",
[2025-10-12 18:46:11]  *** Listing of results directory ***
[2025-10-12 18:46:11] total 408428
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-12 18:46:11] -rwx------. 1 boinc boinc     36292 Oct 12 09:46 runpilot2-wrapper.sh
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc      5112 Oct 12 09:46 queuedata.json
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:46:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:31 run_atlas
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:31 job.xml
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc      6391 Oct 12 14:31 init_data.xml
[2025-10-12 18:46:11] -rw-r--r--. 2 boinc boinc 219584943 Oct 12 14:31 EVNT.46676267._003515.pool.root.1
[2025-10-12 18:46:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:31 start_atlas.sh
[2025-10-12 18:46:11] drwxrwx--x. 2 boinc boinc        68 Oct 12 14:31 shared
[2025-10-12 18:46:11] -rw-r--r--. 2 boinc boinc    569679 Oct 12 14:31 input.tar.gz
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:31 boinc_lockfile
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc      2550 Oct 12 14:32 pandaJob.out
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc    975512 Oct 12 14:35 agis_schedconf.cvmfs.json
[2025-10-12 18:46:11] drwx------. 5 boinc boinc      4096 Oct 12 14:35 pilot3
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc 189812046 Oct 12 18:42 HITS.46676269._073859.pool.root.1
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc       531 Oct 12 18:42 boinc_task_state.xml
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc      1018 Oct 12 18:43 memory_monitor_summary.json
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc   1560580 Oct 12 18:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc    472526 Oct 12 18:43 log.46676269._073859.job.log.tgz.1
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc      7786 Oct 12 18:45 heartbeat.json
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc        95 Oct 12 18:45 pilot_heartbeat.json
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc      4885 Oct 12 18:46 pilotlog.txt
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc        28 Oct 12 18:46 wrapper_checkpoint.txt
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:46 boinc_mmap_file
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc   2001917 Oct 12 18:46 log.46676269._073859.job.log.1
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc       357 Oct 12 18:46 output.list
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:46 runtime_log
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc   2488320 Oct 12 18:46 result.tar.gz
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc      8717 Oct 12 18:46 runtime_log.err
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc       657 Oct 12 18:46 5fPLDmfx5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml2iNDmlypgIm.diag
[2025-10-12 18:46:11] -rw-r--r--. 1 boinc boinc     20623 Oct 12 18:46 stderr.txt
[2025-10-12 18:46:11] HITS file was successfully produced:
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc 189812046 Oct 12 18:42 shared/HITS.pool.root.1
[2025-10-12 18:46:11]  *** Contents of shared directory: ***
[2025-10-12 18:46:11] total 402812
[2025-10-12 18:46:11] -rw-r--r--. 2 boinc boinc 219584943 Oct 12 14:31 ATLAS.root_0
[2025-10-12 18:46:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:31 start_atlas.sh
[2025-10-12 18:46:11] -rw-r--r--. 2 boinc boinc    569679 Oct 12 14:31 input.tar.gz
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc 189812046 Oct 12 18:42 HITS.pool.root.1
[2025-10-12 18:46:11] -rw-------. 1 boinc boinc   2488320 Oct 12 18:46 result.tar.gz
18:46:13 (15759): run_atlas exited; CPU time 53965.272425
18:46:13 (15759): called boinc_finish(0)

</stderr_txt>
]]>

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