Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
16:17:12 (3708): wrapper (7.7.26015): starting
16:17:12 (3708): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:17:12] Arguments: --nthreads 8
[2025-10-12 16:17:12] Threads: 8
[2025-10-12 16:17:12] Checking for CVMFS
[2025-10-12 16:17:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:17:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:17:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:17:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:17:12] 2.11.0.0 4896 1468 53940 151623 3 14 1938587 4096001 1790 130560 0 101466 93.731 714691 1013 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-12 16:17:12] CVMFS is ok
[2025-10-12 16:17:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:17:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:17:12] Further information can be found at the LHC@home message board.
[2025-10-12 16:17:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:17:12] Checking for apptainer binary...
[2025-10-12 16:17:12] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-12 16:17:12] apptainer is not installed, using version from CVMFS
[2025-10-12 16:17:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:17:12] WARNING: Environment variable TMPDIR already has value [/tmp/job_10511399/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node157
[2025-10-12 16:17:12] apptainer works
[2025-10-12 16:17:13] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:17:13] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:17:13] Starting ATLAS job with PandaID=6839660115
[2025-10-12 16:17:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10511399/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:06:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:06:28]  mtime=0
[2025-10-12 17:06:28]  protocol_id=None
[2025-10-12 17:06:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 17:06:28]  replicas=None
[2025-10-12 17:06:28]  scope=mc23_13p6TeV
[2025-10-12 17:06:28]  status=None
[2025-10-12 17:06:28]  status_code=0
[2025-10-12 17:06:28]  storage_token=
[2025-10-12 17:06:28]  surl=/tmp/job_10511399/atlas/pilot/slots/0/PanDA_Pilot-6839660115/log.46676269._073887.job.log.tgz.1
[2025-10-12 17:06:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/c4/log.46676269._073887.job.log.tgz.1
[2025-10-12 17:06:28]  workdir=None
[2025-10-12 17:06:28] ]
[2025-10-12 17:06:28] 2025-10-12 15:05:30,592 | INFO     | transferring file log.46676269._073887.job.log.tgz.1 from /tmp/job_10511399/atlas/pilot/slots/0/PanDA_Pilot-6839660115/log.46676269._073887.job.log.tgz.1 to /tmp/j
[2025-10-12 17:06:28] 2025-10-12 15:05:30,592 | INFO     | executing command: /usr/bin/env mv /tmp/job_10511399/atlas/pilot/slots/0/PanDA_Pilot-6839660115/log.46676269._073887.job.log.tgz.1 /tmp/job_10511399/atlas/pilot/sl
[2025-10-12 17:06:28] 2025-10-12 15:05:30,600 | INFO     | adding to output.list: log.46676269._073887.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/c4/log.46676269._073887.job.log.tg
[2025-10-12 17:06:28] 2025-10-12 15:05:30,600 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:06:28] 2025-10-12 15:05:30,600 | INFO     | summary of transferred files:
[2025-10-12 17:06:28] 2025-10-12 15:05:30,600 | INFO     |  -- lfn=log.46676269._073887.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:06:28] 2025-10-12 15:05:30,600 | INFO     | stage-out finished correctly
[2025-10-12 17:06:28] 2025-10-12 15:05:31,213 | INFO     | time since job start (2894s) is within the limit (172800.0s)
[2025-10-12 17:06:28] 2025-10-12 15:05:32,427 | INFO     | monitor loop #216: job 0:6839660115 is in state 'finished'
[2025-10-12 17:06:28] 2025-10-12 15:05:32,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:28] 2025-10-12 15:05:33,218 | INFO     | time since job start (2896s) is within the limit (172800.0s)
[2025-10-12 17:06:28] 2025-10-12 15:05:34,047 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:06:28] 2025-10-12 15:05:34,929 | INFO     | monitor loop #217: job 0:6839660115 is in state 'finished'
[2025-10-12 17:06:28] 2025-10-12 15:05:34,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | job 6839660115 has state=finished
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | preparing for final server update for job 6839660115 in state='finished'
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | job 6839660115 has finished - writing final server update
[2025-10-12 17:06:28] 2025-10-12 15:05:35,045 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:06:28] 2025-10-12 15:05:35,046 | INFO     | executing command: lscpu
[2025-10-12 17:06:28] 2025-10-12 15:05:35,076 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:06:28] 2025-10-12 15:05:35,223 | INFO     | time since job start (2898s) is within the limit (172800.0s)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,822 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:06:28] 2025-10-12 15:05:36,827 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2770.5364999999993
[2025-10-12 17:06:28] 2025-10-12 15:05:36,832 | INFO     | using path: /tmp/job_10511399/atlas/pilot/slots/0/PanDA_Pilot-6839660115/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,832 | INFO     | extracted standard info from prmon json
[2025-10-12 17:06:28] 2025-10-12 15:05:36,832 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:06:28] 2025-10-12 15:05:36,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:06:28] 2025-10-12 15:05:36,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:06:28] 2025-10-12 15:05:36,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:06:28] 2025-10-12 15:05:36,833 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:06:28] 2025-10-12 15:05:36,833 | INFO     | sum of square deviations: 21358540.0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,833 | INFO     | sum of deviations: 174379418.99999994
[2025-10-12 17:06:28] 2025-10-12 15:05:36,833 | INFO     | mean x: 1760280181.0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,833 | INFO     | mean y: 2606014.926829268
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | -- intersect: -14369005304.947784
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | intersect: -14369005304.947784
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | chi2: 0.0006085303231670603
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | -- intersect: -14369005304.947784
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | current memory leak: 8.16 B/s (using 41 data points, chi2=0.00)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | could have reported an average CPU frequency of 2757 MHz (5 samples)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | ..............................
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . Timing measurements:
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . get job = 0 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . initial setup = 1 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . payload setup = 2 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . stage-in = 0 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . payload execution = 2873 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . stage-out = 0 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | . log creation = 0 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,834 | INFO     | ..............................
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | 
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | job summary report
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | --------------------------------------------------
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | PanDA job id: 6839660115
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | task id: 46676269
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | errors: (none)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | pilot state: finished 
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | transexitcode: 0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | exeerrorcode: 0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | exeerrordiag: 
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | exitcode: 0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | exitmsg: OK
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | cpuconsumptiontime: 20786 s
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | nevents: 400
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | neventsw: 0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | pid: 17058
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | pgrp: 17058
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | corecount: 8
[2025-10-12 17:06:28] 2025-10-12 15:05:36,884 | INFO     | event service: False
[2025-10-12 17:06:28] 2025-10-12 15:05:36,885 | INFO     | sizes: {0: 2348983, 2: 2349245, 10: 2349273, 2880: 2383794, 2884: 2383794, 2886: 2384020}
[2025-10-12 17:06:28] 2025-10-12 15:05:36,885 | INFO     | --------------------------------------------------
[2025-10-12 17:06:28] 2025-10-12 15:05:36,885 | INFO     | 
[2025-10-12 17:06:28] 2025-10-12 15:05:36,885 | INFO     | executing command: ls -lF /tmp/job_10511399/atlas/pilot/slots/0
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | job 6839660115 has completed (purged errors)
[2025-10-12 17:06:28] 2025-10-12 15:05:36,895 | INFO     | overall cleanup function is called
[2025-10-12 17:06:28] 2025-10-12 15:05:37,901 | INFO     | --- collectZombieJob: --- 10, [17058]
[2025-10-12 17:06:28] 2025-10-12 15:05:37,901 | INFO     | zombie collector waiting for pid 17058
[2025-10-12 17:06:28] 2025-10-12 15:05:37,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:06:28] 2025-10-12 15:05:37,901 | INFO     | collected zombie processes
[2025-10-12 17:06:28] 2025-10-12 15:05:37,901 | INFO     | will attempt to kill all subprocesses of pid=17058
[2025-10-12 17:06:28] 2025-10-12 15:05:38,010 | INFO     | process IDs to be killed: [17058] (in reverse order)
[2025-10-12 17:06:28] 2025-10-12 15:05:38,050 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:06:28] 2025-10-12 15:05:38,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:06:28] 2025-10-12 15:05:38,055 | INFO     | did not find any defunct processes belonging to 17058
[2025-10-12 17:06:28] 2025-10-12 15:05:38,058 | INFO     | did not find any defunct processes belonging to 17058
[2025-10-12 17:06:28] 2025-10-12 15:05:38,058 | INFO     | ready for new job
[2025-10-12 17:06:28] 2025-10-12 15:05:38,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:06:28] 2025-10-12 15:05:38,059 | INFO     | ***************************************
[2025-10-12 17:06:28] 2025-10-12 15:05:38,059 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 17:06:28] 2025-10-12 15:05:38,059 | INFO     | ***************************************
[2025-10-12 17:06:28] 2025-10-12 15:05:38,059 | INFO     | 
[2025-10-12 17:06:28] 2025-10-12 15:05:38,073 | INFO     | architecture information:
[2025-10-12 17:06:28] 2025-10-12 15:05:38,073 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:06:28] 2025-10-12 15:05:38,079 | INFO     | cat /etc/os-release:
[2025-10-12 17:06:28] NAME="CentOS Linux"
[2025-10-12 17:06:28] VERSION="7 (Core)"
[2025-10-12 17:06:28] ID="centos"
[2025-10-12 17:06:28] ID_LIKE="rhel fedora"
[2025-10-12 17:06:28] VERSION_ID="7"
[2025-10-12 17:06:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:06:28] ANSI_COLOR="0;31"
[2025-10-12 17:06:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:06:28] HOME_URL="https://www.centos.org/"
[2025-10-12 17:06:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:06:28] 
[2025-10-12 17:06:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:06:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:06:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:06:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:06:28] 
[2025-10-12 17:06:28] 2025-10-12 15:05:38,079 | INFO     | ***************************************
[2025-10-12 17:06:28] 2025-10-12 15:05:38,582 | INFO     | executing command: df -mP /tmp/job_10511399/atlas/pilot/slots/0
[2025-10-12 17:06:28] 2025-10-12 15:05:38,588 | INFO     | sufficient remaining disk space (226895069184 B)
[2025-10-12 17:06:28] 2025-10-12 15:05:38,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:06:28] 2025-10-12 15:05:38,588 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:06:28] 2025-10-12 15:05:38,588 | INFO     | update_server=False
[2025-10-12 17:06:28] 2025-10-12 15:05:38,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:06:28] 2025-10-12 15:05:38,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:06:28] 2025-10-12 15:05:38,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:06:28] 2025-10-12 15:05:38,589 | INFO     | aborting loop
[2025-10-12 17:06:28] 2025-10-12 15:05:38,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:06:28] 2025-10-12 15:05:38,709 | INFO     | all data control threads have been joined
[2025-10-12 17:06:28] 2025-10-12 15:05:38,920 | INFO     | all payload control threads have been joined
[2025-10-12 17:06:28] 2025-10-12 15:05:39,594 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,594 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,594 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,607 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,621 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,657 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,714 | INFO     | [data] control thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,925 | INFO     | [payload] control thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:39,978 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:40,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:06:28] 2025-10-12 15:05:40,125 | INFO     | all job control threads have been joined
[2025-10-12 17:06:28] 2025-10-12 15:05:40,194 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:40,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:40,663 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:40,844 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:40,957 | INFO     | [job] validate thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:41,130 | INFO     | [job] control thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:05:44,106 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:06:28] 2025-10-12 15:06:08,418 | INFO     | PID=8689 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 17:06:28] 2025-10-12 15:06:08,418 | INFO     | .. there are 3 such processes running
[2025-10-12 17:06:28] 2025-10-12 15:06:08,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:06:28] 2025-10-12 15:06:08,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:06:28] 2025-10-12 15:06:08,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:06:28] 2025-10-12 15:06:22,116 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:06:28] 2025-10-12 15:06:23,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062568192)>']
[2025-10-12 17:06:28] 2025-10-12 15:06:23,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:06:28] 2025-10-12 15:06:23,493 | INFO     | [monitor] control thread has ended
[2025-10-12 17:06:28] 2025-10-12 15:06:28,317 | INFO     | all workflow threads have been joined
[2025-10-12 17:06:28] 2025-10-12 15:06:28,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:06:28] 2025-10-12 15:06:28,318 | INFO     | traces error code: 0
[2025-10-12 17:06:28] 2025-10-12 15:06:28,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:06:28] 2025-10-12 15:06:28,368 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:06:28] 2025-10-12 15:06:28,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:06:28] 2025-10-12 15:06:28,370 [wrapper] pilotpid: 8689
[2025-10-12 17:06:28] 2025-10-12 15:06:28,372 [wrapper] Pilot exit status: 0
[2025-10-12 17:06:28] 2025-10-12 15:06:28,375 [wrapper] pandaids: 6839660115
[2025-10-12 17:06:28] 2025-10-12 15:06:28,399 [wrapper] cleanup supervisor_pilot  5602 8690
[2025-10-12 17:06:28] 2025-10-12 15:06:28,400 [wrapper] Test setup, not cleaning
[2025-10-12 17:06:28] 2025-10-12 15:06:28,401 [wrapper] apfmon messages muted
[2025-10-12 17:06:28] 2025-10-12 15:06:28,402 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:06:28] 2025-10-12 15:06:28,403 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:06:28]  *** Error codes and diagnostics ***
[2025-10-12 17:06:28]     "exeErrorCode": 0,
[2025-10-12 17:06:28]     "exeErrorDiag": "",
[2025-10-12 17:06:28]     "pilotErrorCode": 0,
[2025-10-12 17:06:28]     "pilotErrorDiag": "",
[2025-10-12 17:06:28]  *** Listing of results directory ***
[2025-10-12 17:06:28] total 413500
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      5112 Oct 12 09:46 queuedata.json
[2025-10-12 17:06:28] -rwx------ 1 mf493845 unix-user     36292 Oct 12 09:47 runpilot2-wrapper.sh
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user       100 Oct 12 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:06:28] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 12 15:21 run_atlas
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user       105 Oct 12 15:21 job.xml
[2025-10-12 17:06:28] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 16:17 start_atlas.sh
[2025-10-12 17:06:28] drwxrwx--x 2 mf493845 unix-user       100 Oct 12 16:17 shared
[2025-10-12 17:06:28] -rw-r--r-- 2 mf493845 unix-user    576709 Oct 12 16:17 input.tar.gz
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      6394 Oct 12 16:17 init_data.xml
[2025-10-12 17:06:28] -rw-r--r-- 2 mf493845 unix-user 218927512 Oct 12 16:17 EVNT.46676267._003516.pool.root.1
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user         0 Oct 12 16:17 boinc_setup_complete
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      8192 Oct 12 16:17 boinc_mmap_file
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user         0 Oct 12 16:17 boinc_lockfile
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      2550 Oct 12 16:17 pandaJob.out
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user    975528 Oct 12 16:17 agis_schedconf.cvmfs.json
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user   1560580 Oct 12 16:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:06:28] drwx------ 4 mf493845 unix-user       420 Oct 12 16:17 pilot3
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user 199065973 Oct 12 17:05 HITS.46676269._073887.pool.root.1
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      1020 Oct 12 17:05 memory_monitor_summary.json
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user    313831 Oct 12 17:05 log.46676269._073887.job.log.tgz.1
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      7776 Oct 12 17:05 heartbeat.json
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user        95 Oct 12 17:06 pilot_heartbeat.json
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      4834 Oct 12 17:06 pilotlog.txt
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user    457978 Oct 12 17:06 log.46676269._073887.job.log.1
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user       357 Oct 12 17:06 output.list
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user       620 Oct 12 17:06 runtime_log
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user    788480 Oct 12 17:06 result.tar.gz
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user      9076 Oct 12 17:06 runtime_log.err
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user       643 Oct 12 17:06 GpkLDmIz5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG3iNDmcdyQcm.diag
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user     22151 Oct 12 17:06 stderr.txt
[2025-10-12 17:06:28] HITS file was successfully produced:
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user 199065973 Oct 12 17:05 shared/HITS.pool.root.1
[2025-10-12 17:06:28]  *** Contents of shared directory: ***
[2025-10-12 17:06:28] total 409556
[2025-10-12 17:06:28] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 16:17 start_atlas.sh
[2025-10-12 17:06:28] -rw-r--r-- 2 mf493845 unix-user    576709 Oct 12 16:17 input.tar.gz
[2025-10-12 17:06:28] -rw-r--r-- 2 mf493845 unix-user 218927512 Oct 12 16:17 ATLAS.root_0
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user 199065973 Oct 12 17:05 HITS.pool.root.1
[2025-10-12 17:06:28] -rw------- 1 mf493845 unix-user    788480 Oct 12 17:06 result.tar.gz
17:06:29 (3708): run_atlas exited; CPU time 20831.068162
17:06:29 (3708): called boinc_finish(0)

</stderr_txt>
]]>

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