Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:20:00 (2053890): wrapper (7.7.26015): starting
12:20:00 (2053890): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:20:00] Arguments: --nthreads 8
[2025-10-12 12:20:00] Threads: 8
[2025-10-12 12:20:00] Checking for CVMFS
[2025-10-12 12:20:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:20:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:20:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:20:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:20:02] 2.13.2.0 5112 5911 136816 151625 3 346 38616035 40960000 18884 16776704 0 18807229 99.887 4124791 28687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:20:02] CVMFS is ok
[2025-10-12 12:20:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:20:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:20:02] Further information can be found at the LHC@home message board.
[2025-10-12 12:20:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:20:02] Checking for apptainer binary...
[2025-10-12 12:20:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:20:02] Running /usr/bin/apptainer --version
[2025-10-12 12:20:03] apptainer version 1.4.3-1.el9
[2025-10-12 12:20:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:20:03] c-212-2.aglt2.org
[2025-10-12 12:20:03] apptainer works
[2025-10-12 12:20:03] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:20:03] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:20:04] Starting ATLAS job with PandaID=6839475114
[2025-10-12 12:20:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:07:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:07:14] 2025-10-12 18:06:35,334 | INFO     | -- intersect: -86441979221.07196
[2025-10-12 14:07:14] 2025-10-12 18:06:35,334 | INFO     | intersect: -86441979221.07196
[2025-10-12 14:07:14] 2025-10-12 18:06:35,335 | INFO     | chi2: 1.8550319201018182
[2025-10-12 14:07:14] 2025-10-12 18:06:35,335 | INFO     | sum of square deviations: 282961082.6597932
[2025-10-12 14:07:14] 2025-10-12 18:06:35,335 | INFO     | sum of deviations: 15388013731.412365
[2025-10-12 14:07:14] 2025-10-12 18:06:35,335 | INFO     | mean x: 1760289095.185567
[2025-10-12 14:07:14] 2025-10-12 18:06:35,335 | INFO     | mean y: 2463069.8659793814
[2025-10-12 14:07:14] 2025-10-12 18:06:35,336 | INFO     | -- intersect: -95725728642.41388
[2025-10-12 14:07:14] 2025-10-12 18:06:35,336 | INFO     | intersect: -95725728642.41388
[2025-10-12 14:07:14] 2025-10-12 18:06:35,336 | INFO     | chi2: 1.860187249625823
[2025-10-12 14:07:14] 2025-10-12 18:06:35,336 | INFO     | current chi2=1.860187249625823 (change=-0.27791055604702514 %)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,336 | INFO     | right removable region: 96
[2025-10-12 14:07:14] 2025-10-12 18:06:35,336 | INFO     | sum of square deviations: 282950102.6597932
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | sum of deviations: -1283160005.7731955
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | mean x: 1760289400.185567
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | mean y: 2522114.87628866
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | -- intersect: 7985318147.364068
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | intersect: 7985318147.364068
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | chi2: 0.045844568225811205
[2025-10-12 14:07:14] 2025-10-12 18:06:35,337 | INFO     | current chi2=0.045844568225811205 (change=97.52863723103509 %)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,338 | INFO     | sum of square deviations: 241399647.47826087
[2025-10-12 14:07:14] 2025-10-12 18:06:35,338 | INFO     | sum of deviations: 1586704286.6956522
[2025-10-12 14:07:14] 2025-10-12 18:06:35,338 | INFO     | mean x: 1760289552.6956522
[2025-10-12 14:07:14] 2025-10-12 18:06:35,338 | INFO     | mean y: 2511713.9891304346
[2025-10-12 14:07:14] 2025-10-12 18:06:35,338 | INFO     | -- intersect: -11567757788.327732
[2025-10-12 14:07:14] 2025-10-12 18:06:35,339 | INFO     | intersect: -11567757788.327732
[2025-10-12 14:07:14] 2025-10-12 18:06:35,339 | INFO     | chi2: 0.0009830731506824245
[2025-10-12 14:07:14] 2025-10-12 18:06:35,339 | INFO     | current chi2=0.0009830731506824245 (change=97.85563876217523 %)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,339 | INFO     | sum of square deviations: 204128342.27586198
[2025-10-12 14:07:14] 2025-10-12 18:06:35,339 | INFO     | sum of deviations: 1090167600.2068965
[2025-10-12 14:07:14] 2025-10-12 18:06:35,339 | INFO     | mean x: 1760289705.2068965
[2025-10-12 14:07:14] 2025-10-12 18:06:35,340 | INFO     | mean y: 2513730.988505747
[2025-10-12 14:07:14] 2025-10-12 18:06:35,340 | INFO     | -- intersect: -9398487532.231125
[2025-10-12 14:07:14] 2025-10-12 18:06:35,340 | INFO     | intersect: -9398487532.231125
[2025-10-12 14:07:14] 2025-10-12 18:06:35,340 | INFO     | chi2: 0.0005990658286167057
[2025-10-12 14:07:14] 2025-10-12 18:06:35,340 | INFO     | current chi2=0.0005990658286167057 (change=39.06192756857927 %)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,340 | INFO     | sum of square deviations: 170913871.37804896
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | sum of deviations: 801895548.4756099
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | mean x: 1760289857.695122
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | mean y: 2515047.93902439
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | -- intersect: -8256431926.529753
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | intersect: -8256431926.529753
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | chi2: 0.0005165362629938128
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | current chi2=0.0005165362629938128 (change=13.776376765381656 %)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,341 | INFO     | left removable region: 40
[2025-10-12 14:07:14] 2025-10-12 18:06:35,342 | INFO     | sum of square deviations: 54418535.839285694
[2025-10-12 14:07:14] 2025-10-12 18:06:35,342 | INFO     | sum of deviations: 265276911.6964286
[2025-10-12 14:07:14] 2025-10-12 18:06:35,342 | INFO     | mean x: 1760290284.6964285
[2025-10-12 14:07:14] 2025-10-12 18:06:35,342 | INFO     | mean y: 2518840.9821428573
[2025-10-12 14:07:14] 2025-10-12 18:06:35,342 | INFO     | -- intersect: -8578461209.502529
[2025-10-12 14:07:14] 2025-10-12 18:06:35,342 | INFO     | intersect: -8578461209.502529
[2025-10-12 14:07:14] 2025-10-12 18:06:35,343 | INFO     | chi2: 0.00026311906062362306
[2025-10-12 14:07:14] 2025-10-12 18:06:35,343 | INFO     | -- intersect: -8578461209.502529
[2025-10-12 14:07:14] 2025-10-12 18:06:35,343 | INFO     | current memory leak: 4.87 B/s (using 56 data points, chi2=0.00)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | could have reported an average CPU frequency of 2942 MHz (7 samples)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | ..............................
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | . Timing measurements:
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | . get job = 0 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | . initial setup = 3 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | . payload setup = 38 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | . stage-in = 0 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,344 | INFO     | . payload execution = 6230 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,345 | INFO     | . stage-out = 0 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,345 | INFO     | . log creation = 0 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,345 | INFO     | ..............................
[2025-10-12 14:07:14] 2025-10-12 18:06:35,432 | INFO     | 
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | job summary report
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | --------------------------------------------------
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | PanDA job id: 6839475114
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | task id: 46676269
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | errors: (none)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | pilot state: finished 
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | transexitcode: 0
[2025-10-12 14:07:14] 2025-10-12 18:06:35,433 | INFO     | exeerrorcode: 0
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | exeerrordiag: 
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | exitcode: 0
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | exitmsg: OK
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | cpuconsumptiontime: 36215 s
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | nevents: 400
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | neventsw: 0
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | pid: 2068440
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | pgrp: 2068440
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | corecount: 8
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | event service: False
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | sizes: {0: 2348624, 1: 2348680, 2: 2348907, 13: 2348907, 24: 2349253, 35: 2349253, 6272: 2376409, 6274: 2385407, 6276: 2385463, 6284: 2385657}
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | --------------------------------------------------
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | 
[2025-10-12 14:07:14] 2025-10-12 18:06:35,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 14:07:14] 2025-10-12 18:06:35,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:07:14] 2025-10-12 18:06:35,467 | INFO     | job 6839475114 has completed (purged errors)
[2025-10-12 14:07:14] 2025-10-12 18:06:35,468 | INFO     | overall cleanup function is called
[2025-10-12 14:07:14] 2025-10-12 18:06:36,477 | INFO     | --- collectZombieJob: --- 10, [2068440]
[2025-10-12 14:07:14] 2025-10-12 18:06:36,477 | INFO     | zombie collector waiting for pid 2068440
[2025-10-12 14:07:14] 2025-10-12 18:06:36,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:07:14] 2025-10-12 18:06:36,477 | INFO     | collected zombie processes
[2025-10-12 14:07:14] 2025-10-12 18:06:36,477 | INFO     | will attempt to kill all subprocesses of pid=2068440
[2025-10-12 14:07:14] 2025-10-12 18:06:36,924 | INFO     | process IDs to be killed: [2068440] (in reverse order)
[2025-10-12 14:07:14] 2025-10-12 18:06:37,092 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:07:14] 2025-10-12 18:06:37,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:07:14] 2025-10-12 18:06:37,117 | INFO     | did not find any defunct processes belonging to 2068440
[2025-10-12 14:07:14] 2025-10-12 18:06:37,140 | INFO     | did not find any defunct processes belonging to 2068440
[2025-10-12 14:07:14] 2025-10-12 18:06:37,141 | INFO     | ready for new job
[2025-10-12 14:07:14] 2025-10-12 18:06:37,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:07:14] 2025-10-12 18:06:37,145 | INFO     | ***************************************
[2025-10-12 14:07:14] 2025-10-12 18:06:37,145 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:07:14] 2025-10-12 18:06:37,145 | INFO     | ***************************************
[2025-10-12 14:07:14] 2025-10-12 18:06:37,145 | INFO     | 
[2025-10-12 14:07:14] 2025-10-12 18:06:37,152 | INFO     | architecture information:
[2025-10-12 14:07:14] 2025-10-12 18:06:37,154 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:07:14] 2025-10-12 18:06:37,185 | INFO     | cat /etc/os-release:
[2025-10-12 14:07:14] NAME="CentOS Linux"
[2025-10-12 14:07:14] VERSION="7 (Core)"
[2025-10-12 14:07:14] ID="centos"
[2025-10-12 14:07:14] ID_LIKE="rhel fedora"
[2025-10-12 14:07:14] VERSION_ID="7"
[2025-10-12 14:07:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:07:14] ANSI_COLOR="0;31"
[2025-10-12 14:07:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:07:14] HOME_URL="https://www.centos.org/"
[2025-10-12 14:07:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:07:14] 
[2025-10-12 14:07:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:07:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:07:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:07:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:07:14] 
[2025-10-12 14:07:14] 2025-10-12 18:06:37,186 | INFO     | ***************************************
[2025-10-12 14:07:14] 2025-10-12 18:06:37,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 14:07:14] 2025-10-12 18:06:37,722 | INFO     | sufficient remaining disk space (126989893632 B)
[2025-10-12 14:07:14] 2025-10-12 18:06:37,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:07:14] 2025-10-12 18:06:37,723 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:07:14] 2025-10-12 18:06:37,723 | INFO     | update_server=False
[2025-10-12 14:07:14] 2025-10-12 18:06:37,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:07:14] 2025-10-12 18:06:37,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:07:14] 2025-10-12 18:06:37,780 | INFO     | aborting loop
[2025-10-12 14:07:14] 2025-10-12 18:06:38,191 | INFO     | all job control threads have been joined
[2025-10-12 14:07:14] 2025-10-12 18:06:38,407 | INFO     | all data control threads have been joined
[2025-10-12 14:07:14] 2025-10-12 18:06:38,476 | INFO     | all payload control threads have been joined
[2025-10-12 14:07:14] 2025-10-12 18:06:38,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:07:14] 2025-10-12 18:06:38,729 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:38,786 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:38,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:07:14] 2025-10-12 18:06:38,879 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:38,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,104 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,198 | INFO     | [job] control thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,412 | INFO     | [data] control thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,481 | INFO     | [payload] control thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,520 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,646 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:39,891 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:40,212 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:40,226 | INFO     | [job] validate thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:40,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:07:14] 2025-10-12 18:06:40,657 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:41,453 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:06:42,856 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:07:14] 2025-10-12 18:07:07,060 | INFO     | PID=2059971 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:07:14] 2025-10-12 18:07:07,061 | INFO     | .. there are 16 such processes running
[2025-10-12 14:07:14] 2025-10-12 18:07:07,061 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:07:14] 2025-10-12 18:07:07,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:07:14] 2025-10-12 18:07:07,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:07:14] 2025-10-12 18:07:08,532 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:07:14] 2025-10-12 18:07:09,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066131404608)>', '<ExcThread(monitor, started 140065653122816)>']
[2025-10-12 14:07:14] 2025-10-12 18:07:09,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:07:14] 2025-10-12 18:07:09,073 | INFO     | [monitor] control thread has ended
[2025-10-12 14:07:14] 2025-10-12 18:07:14,039 | INFO     | all workflow threads have been joined
[2025-10-12 14:07:14] 2025-10-12 18:07:14,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:07:14] 2025-10-12 18:07:14,039 | INFO     | traces error code: 0
[2025-10-12 14:07:14] 2025-10-12 18:07:14,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:07:14] 2025-10-12 18:07:14,260 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:07:14] 2025-10-12 18:07:14,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:07:14] 2025-10-12 18:07:14,266 [wrapper] pilotpid: 2059971
[2025-10-12 14:07:14] 2025-10-12 18:07:14,272 [wrapper] Pilot exit status: 0
[2025-10-12 14:07:14] 2025-10-12 18:07:14,304 [wrapper] pandaids: 6839475114
[2025-10-12 14:07:14] 2025-10-12 18:07:14,397 [wrapper] cleanup supervisor_pilot 2276579 2059972
[2025-10-12 14:07:14] 2025-10-12 18:07:14,402 [wrapper] Test setup, not cleaning
[2025-10-12 14:07:14] 2025-10-12 18:07:14,406 [wrapper] apfmon messages muted
[2025-10-12 14:07:14] 2025-10-12 18:07:14,411 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:07:14] 2025-10-12 18:07:14,415 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:07:14]  *** Error codes and diagnostics ***
[2025-10-12 14:07:14]     "exeErrorCode": 0,
[2025-10-12 14:07:14]     "exeErrorDiag": "",
[2025-10-12 14:07:14]     "pilotErrorCode": 0,
[2025-10-12 14:07:14]     "pilotErrorDiag": "",
[2025-10-12 14:07:14]  *** Listing of results directory ***
[2025-10-12 14:07:14] total 407248
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:21 queuedata.json
[2025-10-12 14:07:14] -rwx------. 1 boincer umatlas     36292 Oct 12 01:22 runpilot2-wrapper.sh
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:07:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:19 run_atlas
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:19 job.xml
[2025-10-12 14:07:14] -rw-r--r--. 2 boincer umatlas 219913833 Oct 12 12:20 EVNT.46676267._004319.pool.root.1
[2025-10-12 14:07:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:20 start_atlas.sh
[2025-10-12 14:07:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:20 shared
[2025-10-12 14:07:14] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 12:20 input.tar.gz
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:20 boinc_lockfile
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 12:20 pandaJob.out
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas    975528 Oct 12 12:20 agis_schedconf.cvmfs.json
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:07:14] drwx------. 5 boincer umatlas      4096 Oct 12 12:20 pilot3
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 14:03 init_data.xml
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas 190766068 Oct 12 14:05 HITS.46676269._071848.pool.root.1
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas       529 Oct 12 14:05 boinc_task_state.xml
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas      1032 Oct 12 14:06 memory_monitor_summary.json
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas    336166 Oct 12 14:06 log.46676269._071848.job.log.tgz.1
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas      7768 Oct 12 14:06 heartbeat.json
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas        95 Oct 12 14:07 pilot_heartbeat.json
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:07 boinc_mmap_file
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas        27 Oct 12 14:07 wrapper_checkpoint.txt
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas      4825 Oct 12 14:07 pilotlog.txt
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas    879492 Oct 12 14:07 log.46676269._071848.job.log.1
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas       357 Oct 12 14:07 output.list
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:07 runtime_log
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas   1239040 Oct 12 14:07 result.tar.gz
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 14:07 runtime_log.err
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas       655 Oct 12 14:07 JHHLDmvi3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCITMDm9AKKcm.diag
[2025-10-12 14:07:14] -rw-r--r--. 1 boincer umatlas     21025 Oct 12 14:07 stderr.txt
[2025-10-12 14:07:14] HITS file was successfully produced:
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas 190766068 Oct 12 14:05 shared/HITS.pool.root.1
[2025-10-12 14:07:14]  *** Contents of shared directory: ***
[2025-10-12 14:07:14] total 402852
[2025-10-12 14:07:14] -rw-r--r--. 2 boincer umatlas 219913833 Oct 12 12:20 ATLAS.root_0
[2025-10-12 14:07:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:20 start_atlas.sh
[2025-10-12 14:07:14] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 12:20 input.tar.gz
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas 190766068 Oct 12 14:05 HITS.pool.root.1
[2025-10-12 14:07:14] -rw-------. 1 boincer umatlas   1239040 Oct 12 14:07 result.tar.gz
14:07:15 (2053890): run_atlas exited; CPU time 36328.802630
14:07:15 (2053890): called boinc_finish(0)

</stderr_txt>
]]>

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