Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
08:39:13 (839949): wrapper (7.7.26015): starting
08:39:13 (839949): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:39:13] Arguments: --nthreads 12
[2025-10-12 08:39:13] Threads: 12
[2025-10-12 08:39:13] Checking for CVMFS
[2025-10-12 08:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:39:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:39:14] 2.13.2.0 14624 532 52344 151620 0 188 2507357 4096000 922 130560 0 2044157 99.997 22959 1665 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 08:39:14] CVMFS is ok
[2025-10-12 08:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:39:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 08:39:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 08:39:14] Further information can be found at the LHC@home message board.
[2025-10-12 08:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:39:14] Checking for apptainer binary...
[2025-10-12 08:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:39:14] Running /usr/bin/apptainer --version
[2025-10-12 08:39:14] apptainer version 1.4.3
[2025-10-12 08:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:39:14] zhiwei-Z790-Riptide-WiFi
[2025-10-12 08:39:14] apptainer works
[2025-10-12 08:39:14] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:39:14] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:39:14] Starting ATLAS job with PandaID=6839387484
[2025-10-12 08:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:04:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:04:34]  scope=mc23_13p6TeV
[2025-10-12 09:04:34]  status=None
[2025-10-12 09:04:34]  status_code=0
[2025-10-12 09:04:34]  storage_token=
[2025-10-12 09:04:34]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6839387484/log.46676269._071375.job.log.tgz.1
[2025-10-12 09:04:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/2d/log.46676269._071375.job.log.tgz.1
[2025-10-12 09:04:34]  workdir=None
[2025-10-12 09:04:34] ]
[2025-10-12 09:04:34] 2025-10-12 13:03:56,806 | INFO     | transferring file log.46676269._071375.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6839387484/log.46676269._071375.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 09:04:34] 2025-10-12 13:03:56,806 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6839387484/log.46676269._071375.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._071375.job
[2025-10-12 09:04:34] 2025-10-12 13:03:56,815 | INFO     | adding to output.list: log.46676269._071375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/2d/log.46676269._071375.job.log.tg
[2025-10-12 09:04:34] 2025-10-12 13:03:56,816 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 09:04:34] 2025-10-12 13:03:56,816 | INFO     | summary of transferred files:
[2025-10-12 09:04:34] 2025-10-12 13:03:56,816 | INFO     |  -- lfn=log.46676269._071375.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 09:04:34] 2025-10-12 13:03:56,816 | INFO     | stage-out finished correctly
[2025-10-12 09:04:34] 2025-10-12 13:03:57,558 | INFO     | time since job start (1478s) is within the limit (172800.0s)
[2025-10-12 09:04:34] 2025-10-12 13:03:57,961 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 09:04:34] 2025-10-12 13:03:58,396 | INFO     | monitor loop #118: job 0:6839387484 is in state 'finished'
[2025-10-12 09:04:34] 2025-10-12 13:03:58,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:04:34] 2025-10-12 13:03:59,152 | INFO     | job 6839387484 has state=finished
[2025-10-12 09:04:34] 2025-10-12 13:03:59,152 | INFO     | preparing for final server update for job 6839387484 in state='finished'
[2025-10-12 09:04:34] 2025-10-12 13:03:59,380 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 09:04:34] 2025-10-12 13:03:59,380 | INFO     | this job has now completed (state=finished)
[2025-10-12 09:04:34] 2025-10-12 13:03:59,380 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 09:04:34] 2025-10-12 13:03:59,380 | INFO     | log transfer has been attempted: DONE
[2025-10-12 09:04:34] 2025-10-12 13:03:59,380 | INFO     | job 6839387484 has finished - writing final server update
[2025-10-12 09:04:34] 2025-10-12 13:03:59,380 | INFO     | total number of processed events: 400 (read)
[2025-10-12 09:04:34] 2025-10-12 13:03:59,382 | INFO     | executing command: lscpu
[2025-10-12 09:04:34] 2025-10-12 13:03:59,398 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 09:04:34] 2025-10-12 13:03:59,564 | INFO     | time since job start (1480s) is within the limit (172800.0s)
[2025-10-12 09:04:34] 2025-10-12 13:04:00,652 | INFO     | PID=843800 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:04:34] 2025-10-12 13:04:00,652 | INFO     | .. there are 2 such processes running
[2025-10-12 09:04:34] 2025-10-12 13:04:00,899 | INFO     | monitor loop #119: job 0:6839387484 is in state 'finished'
[2025-10-12 09:04:34] 2025-10-12 13:04:00,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:04:34] 2025-10-12 13:04:01,653 | INFO     | time since job start (1482s) is within the limit (172800.0s)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,444 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 09:04:34] 2025-10-12 13:04:02,446 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 3532.7265000000007
[2025-10-12 09:04:34] 2025-10-12 13:04:02,448 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6839387484/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,448 | INFO     | extracted standard info from prmon json
[2025-10-12 09:04:34] 2025-10-12 13:04:02,448 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:04:34] 2025-10-12 13:04:02,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:04:34] 2025-10-12 13:04:02,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:04:34] 2025-10-12 13:04:02,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | sum of square deviations: 1518168.0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | sum of deviations: -145811594.0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | mean x: 1760273568.0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | mean y: 2921142.8235294116
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | -- intersect: 169067408621.24973
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | intersect: 169067408621.24973
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | chi2: 0.008851030826912612
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | -- intersect: 169067408621.24973
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | current memory leak: -96.04 B/s (using 17 data points, chi2=0.01)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | could have reported an average CPU frequency of 3692 MHz (4 samples)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | ..............................
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | . Timing measurements:
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | . get job = 0 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | . initial setup = 2 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,449 | INFO     | . payload setup = 1 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,450 | INFO     | . stage-in = 0 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,450 | INFO     | . payload execution = 1459 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,450 | INFO     | . stage-out = 0 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,450 | INFO     | . log creation = 0 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,450 | INFO     | ..............................
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | 
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | job summary report
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | --------------------------------------------------
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | PanDA job id: 6839387484
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | task id: 46676269
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | errors: (none)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | pilot state: finished 
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | transexitcode: 0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | exeerrorcode: 0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | exeerrordiag: 
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | exitcode: 0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | exitmsg: OK
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | cpuconsumptiontime: 15562 s
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | nevents: 400
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | neventsw: 0
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | pid: 850443
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | pgrp: 850443
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | corecount: 12
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | event service: False
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | sizes: {0: 2348857, 1: 2349119, 11: 2349147, 1465: 2373861, 1466: 2382859, 1467: 2382915, 1471: 2383237}
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | --------------------------------------------------
[2025-10-12 09:04:34] 2025-10-12 13:04:02,472 | INFO     | 
[2025-10-12 09:04:34] 2025-10-12 13:04:02,473 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:04:34] 2025-10-12 13:04:02,483 | INFO     | job 6839387484 has completed (purged errors)
[2025-10-12 09:04:34] 2025-10-12 13:04:02,483 | INFO     | overall cleanup function is called
[2025-10-12 09:04:34] 2025-10-12 13:04:03,489 | INFO     | --- collectZombieJob: --- 10, [850443]
[2025-10-12 09:04:34] 2025-10-12 13:04:03,489 | INFO     | zombie collector waiting for pid 850443
[2025-10-12 09:04:34] 2025-10-12 13:04:03,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:04:34] 2025-10-12 13:04:03,489 | INFO     | collected zombie processes
[2025-10-12 09:04:34] 2025-10-12 13:04:03,489 | INFO     | will attempt to kill all subprocesses of pid=850443
[2025-10-12 09:04:34] 2025-10-12 13:04:03,554 | INFO     | process IDs to be killed: [850443] (in reverse order)
[2025-10-12 09:04:34] 2025-10-12 13:04:03,578 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:04:34] 2025-10-12 13:04:03,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:04:34] 2025-10-12 13:04:03,580 | INFO     | did not find any defunct processes belonging to 850443
[2025-10-12 09:04:34] 2025-10-12 13:04:03,582 | INFO     | did not find any defunct processes belonging to 850443
[2025-10-12 09:04:34] 2025-10-12 13:04:03,583 | INFO     | ready for new job
[2025-10-12 09:04:34] 2025-10-12 13:04:03,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:04:34] 2025-10-12 13:04:03,583 | INFO     | ***************************************
[2025-10-12 09:04:34] 2025-10-12 13:04:03,583 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:04:34] 2025-10-12 13:04:03,583 | INFO     | ***************************************
[2025-10-12 09:04:34] 2025-10-12 13:04:03,583 | INFO     | 
[2025-10-12 09:04:34] 2025-10-12 13:04:03,584 | INFO     | architecture information:
[2025-10-12 09:04:34] 2025-10-12 13:04:03,584 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:04:34] 2025-10-12 13:04:03,590 | INFO     | cat /etc/os-release:
[2025-10-12 09:04:34] NAME="CentOS Linux"
[2025-10-12 09:04:34] VERSION="7 (Core)"
[2025-10-12 09:04:34] ID="centos"
[2025-10-12 09:04:34] ID_LIKE="rhel fedora"
[2025-10-12 09:04:34] VERSION_ID="7"
[2025-10-12 09:04:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:04:34] ANSI_COLOR="0;31"
[2025-10-12 09:04:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:04:34] HOME_URL="https://www.centos.org/"
[2025-10-12 09:04:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:04:34] 
[2025-10-12 09:04:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:04:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:04:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:04:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:04:34] 
[2025-10-12 09:04:34] 2025-10-12 13:04:03,590 | INFO     | ***************************************
[2025-10-12 09:04:34] 2025-10-12 13:04:04,093 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-12 09:04:34] 2025-10-12 13:04:04,104 | INFO     | sufficient remaining disk space (1819325497344 B)
[2025-10-12 09:04:34] 2025-10-12 13:04:04,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:04:34] 2025-10-12 13:04:04,104 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:04:34] 2025-10-12 13:04:04,104 | INFO     | update_server=False
[2025-10-12 09:04:34] 2025-10-12 13:04:04,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:04:34] 2025-10-12 13:04:04,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:04:34] 2025-10-12 13:04:04,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:04:34] 2025-10-12 13:04:04,393 | INFO     | all payload control threads have been joined
[2025-10-12 09:04:34] 2025-10-12 13:04:04,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:04:34] 2025-10-12 13:04:04,407 | INFO     | aborting loop
[2025-10-12 09:04:34] 2025-10-12 13:04:04,827 | INFO     | all data control threads have been joined
[2025-10-12 09:04:34] 2025-10-12 13:04:04,830 | INFO     | all job control threads have been joined
[2025-10-12 09:04:34] 2025-10-12 13:04:04,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:04:34] 2025-10-12 13:04:05,109 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:05,110 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:05,398 | INFO     | [payload] control thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:05,412 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:05,524 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:05,832 | INFO     | [data] control thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:05,836 | INFO     | [job] control thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,019 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,057 | INFO     | [job] validate thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,075 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,081 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,213 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,648 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:06,862 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:08,110 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:15,113 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:04:34] 2025-10-12 13:04:16,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:04:34] 2025-10-12 13:04:21,001 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:04:34] 2025-10-12 13:04:21,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126525292390208)>', '<ExcThread(monitor, started 126524795627264)>']
[2025-10-12 09:04:34] 2025-10-12 13:04:26,499 | INFO     | all workflow threads have been joined
[2025-10-12 09:04:34] 2025-10-12 13:04:26,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:04:34] 2025-10-12 13:04:26,500 | INFO     | traces error code: 0
[2025-10-12 09:04:34] 2025-10-12 13:04:26,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:04:34] 2025-10-12 13:04:34,833 | INFO     | PID=843800 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:04:34] 2025-10-12 13:04:34,834 | INFO     | .. there are 2 such processes running
[2025-10-12 09:04:34] 2025-10-12 13:04:34,835 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:04:34] 2025-10-12 13:04:34,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:04:34] 2025-10-12 13:04:34,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:04:34] 2025-10-12 13:04:34,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:04:34] 2025-10-12 13:04:34,836 | INFO     | [monitor] control thread has ended
[2025-10-12 09:04:34] 2025-10-12 13:04:34,931 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:04:34] 2025-10-12 13:04:34,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:04:34] 2025-10-12 13:04:34,934 [wrapper] pilotpid: 843800
[2025-10-12 09:04:34] 2025-10-12 13:04:34,935 [wrapper] Pilot exit status: 0
[2025-10-12 09:04:34] 2025-10-12 13:04:34,939 [wrapper] pandaids: 6839387484
[2025-10-12 09:04:34] 2025-10-12 13:04:34,956 [wrapper] cleanup supervisor_pilot  881960 843801
[2025-10-12 09:04:34] 2025-10-12 13:04:34,957 [wrapper] Test setup, not cleaning
[2025-10-12 09:04:34] 2025-10-12 13:04:34,958 [wrapper] apfmon messages muted
[2025-10-12 09:04:34] 2025-10-12 13:04:34,959 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:04:34] 2025-10-12 13:04:34,960 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:04:34]  *** Error codes and diagnostics ***
[2025-10-12 09:04:34]     "exeErrorCode": 0,
[2025-10-12 09:04:34]     "exeErrorDiag": "",
[2025-10-12 09:04:34]     "pilotErrorCode": 0,
[2025-10-12 09:04:34]     "pilotErrorDiag": "",
[2025-10-12 09:04:34]  *** Listing of results directory ***
[2025-10-12 09:04:34] total 415668
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 09:04:34] -rwx------ 1 boinc boinc     36292 Oct 12 00:45 runpilot2-wrapper.sh
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc      5112 Oct 12 00:45 queuedata.json
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc       100 Oct 12 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:04:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 08:39 run_atlas
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc       105 Oct 12 08:39 job.xml
[2025-10-12 09:04:34] -rw-r--r-- 2 boinc boinc 223700133 Oct 12 08:39 EVNT.46676267._004302.pool.root.1
[2025-10-12 09:04:34] -rw-r--r-- 2 boinc boinc    569673 Oct 12 08:39 input.tar.gz
[2025-10-12 09:04:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:39 start_atlas.sh
[2025-10-12 09:04:34] drwxrwx--x 2 boinc boinc      4096 Oct 12 08:39 shared
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:39 boinc_setup_complete
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc     11824 Oct 12 08:39 init_data.xml
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 08:39 boinc_lockfile
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc      2550 Oct 12 08:39 pandaJob.out
[2025-10-12 09:04:34] -rw------- 1 boinc boinc    975512 Oct 12 08:39 agis_schedconf.cvmfs.json
[2025-10-12 09:04:34] -rw------- 1 boinc boinc   1560580 Oct 12 08:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:04:34] drwx------ 5 boinc boinc      4096 Oct 12 08:39 pilot3
[2025-10-12 09:04:34] -rw------- 1 boinc boinc 196818410 Oct 12 09:03 HITS.46676269._071375.pool.root.1
[2025-10-12 09:04:34] -rw------- 1 boinc boinc      1013 Oct 12 09:03 memory_monitor_summary.json
[2025-10-12 09:04:34] -rw------- 1 boinc boinc    352273 Oct 12 09:03 log.46676269._071375.job.log.tgz.1
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc       529 Oct 12 09:04 boinc_task_state.xml
[2025-10-12 09:04:34] -rw------- 1 boinc boinc      7769 Oct 12 09:04 heartbeat.json
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:04 boinc_mmap_file
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:04 wrapper_checkpoint.txt
[2025-10-12 09:04:34] -rw------- 1 boinc boinc       821 Oct 12 09:04 pilotlog.txt
[2025-10-12 09:04:34] -rw------- 1 boinc boinc        95 Oct 12 09:04 pilot_heartbeat.json
[2025-10-12 09:04:34] -rw------- 1 boinc boinc    258035 Oct 12 09:04 log.46676269._071375.job.log.1
[2025-10-12 09:04:34] -rw------- 1 boinc boinc       357 Oct 12 09:04 output.list
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:04 runtime_log
[2025-10-12 09:04:34] -rw------- 1 boinc boinc    624640 Oct 12 09:04 result.tar.gz
[2025-10-12 09:04:34] -rw------- 1 boinc boinc       654 Oct 12 09:04 uQrKDmt82R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGFTMDmeP1B3n.diag
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc      8741 Oct 12 09:04 runtime_log.err
[2025-10-12 09:04:34] -rw-r--r-- 1 boinc boinc     22017 Oct 12 09:04 stderr.txt
[2025-10-12 09:04:34] HITS file was successfully produced:
[2025-10-12 09:04:34] -rw------- 1 boinc boinc 196818410 Oct 12 09:03 shared/HITS.pool.root.1
[2025-10-12 09:04:34]  *** Contents of shared directory: ***
[2025-10-12 09:04:34] total 411864
[2025-10-12 09:04:34] -rw-r--r-- 2 boinc boinc 223700133 Oct 12 08:39 ATLAS.root_0
[2025-10-12 09:04:34] -rw-r--r-- 2 boinc boinc    569673 Oct 12 08:39 input.tar.gz
[2025-10-12 09:04:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 08:39 start_atlas.sh
[2025-10-12 09:04:34] -rw------- 1 boinc boinc 196818410 Oct 12 09:03 HITS.pool.root.1
[2025-10-12 09:04:34] -rw------- 1 boinc boinc    624640 Oct 12 09:04 result.tar.gz
09:04:36 (839949): run_atlas exited; CPU time 15567.739351
09:04:36 (839949): called boinc_finish(0)

</stderr_txt>
]]>

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