Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:14 (18296): wrapper (7.7.26015): starting
08:20:14 (18296): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:20:15] Arguments: --nthreads 12
[2025-10-12 08:20:15] Threads: 12
[2025-10-12 08:20:15] Checking for CVMFS
[2025-10-12 08:20:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:20:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:20:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:20:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:20:15] 2.11.2.0 2916 222827 99332 151620 2 56 19281880 20275201 1 130560 1 108247799 99.984 13412188 12506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:20:15] CVMFS is ok
[2025-10-12 08:20:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:20:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:20:15] Further information can be found at the LHC@home message board.
[2025-10-12 08:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:20:15] Checking for apptainer binary...
[2025-10-12 08:20:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:20:15] Running /usr/bin/apptainer --version
[2025-10-12 08:20:15] apptainer version 1.3.2-1.el7
[2025-10-12 08:20:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:20:16] c-205-23.aglt2.org
[2025-10-12 08:20:16] apptainer works
[2025-10-12 08:20:16] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:20:16] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:20:17] Starting ATLAS job with PandaID=6839659692
[2025-10-12 08:20:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:32:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:32:44]  status=None
[2025-10-12 09:32:44]  status_code=0
[2025-10-12 09:32:44]  storage_token=
[2025-10-12 09:32:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839659692/log.46676269._073671.job.log.tgz.1
[2025-10-12 09:32:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/41/log.46676269._073671.job.log.tgz.1
[2025-10-12 09:32:44]  workdir=None
[2025-10-12 09:32:44] ]
[2025-10-12 09:32:44] 2025-10-12 13:31:55,498 | INFO     | transferring file log.46676269._073671.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839659692/log.46676269._073671.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 09:32:44] 2025-10-12 13:31:55,498 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839659692/log.46676269._073671.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._073671.job
[2025-10-12 09:32:44] 2025-10-12 13:31:55,519 | INFO     | adding to output.list: log.46676269._073671.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/41/log.46676269._073671.job.log.tg
[2025-10-12 09:32:44] 2025-10-12 13:31:55,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 09:32:44] 2025-10-12 13:31:55,520 | INFO     | summary of transferred files:
[2025-10-12 09:32:44] 2025-10-12 13:31:55,520 | INFO     |  -- lfn=log.46676269._073671.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 09:32:44] 2025-10-12 13:31:55,521 | INFO     | stage-out finished correctly
[2025-10-12 09:32:44] 2025-10-12 13:31:56,193 | INFO     | time since job start (4284s) is within the limit (172800.0s)
[2025-10-12 09:32:44] 2025-10-12 13:31:57,282 | WARNING  | process 28350 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 09:32:44] 2025-10-12 13:31:57,282 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839659692/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:32:44] 2025-10-12 13:31:57,369 | INFO     | number of running child processes to parent process 28350: 1
[2025-10-12 09:32:44] 2025-10-12 13:31:57,369 | INFO     | maximum number of monitored processes: 6
[2025-10-12 09:32:44] 2025-10-12 13:31:58,198 | INFO     | time since job start (4286s) is within the limit (172800.0s)
[2025-10-12 09:32:44] 2025-10-12 13:31:58,698 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 09:32:44] 2025-10-12 13:31:58,781 | INFO     | job 6839659692 has state=finished
[2025-10-12 09:32:44] 2025-10-12 13:31:58,781 | INFO     | preparing for final server update for job 6839659692 in state='finished'
[2025-10-12 09:32:44] 2025-10-12 13:31:58,782 | INFO     | this job has now completed (state=finished)
[2025-10-12 09:32:44] 2025-10-12 13:31:58,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 09:32:44] 2025-10-12 13:31:58,782 | INFO     | log transfer has been attempted: DONE
[2025-10-12 09:32:44] 2025-10-12 13:31:58,782 | INFO     | job 6839659692 has finished - writing final server update
[2025-10-12 09:32:44] 2025-10-12 13:31:58,783 | INFO     | total number of processed events: 400 (read)
[2025-10-12 09:32:44] 2025-10-12 13:31:58,784 | INFO     | executing command: lscpu
[2025-10-12 09:32:44] 2025-10-12 13:31:58,809 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 09:32:44] 2025-10-12 13:31:59,873 | INFO     | monitor loop #319: job 0:6839659692 is in state 'finished'
[2025-10-12 09:32:44] 2025-10-12 13:31:59,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:32:44] 2025-10-12 13:32:00,204 | INFO     | time since job start (4288s) is within the limit (172800.0s)
[2025-10-12 09:32:44] 2025-10-12 13:32:02,209 | INFO     | time since job start (4290s) is within the limit (172800.0s)
[2025-10-12 09:32:44] 2025-10-12 13:32:02,375 | INFO     | monitor loop #320: job 0:6839659692 is in state 'finished'
[2025-10-12 09:32:44] 2025-10-12 13:32:02,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,538 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 09:32:44] 2025-10-12 13:32:03,542 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-12 09:32:44] 2025-10-12 13:32:03,544 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839659692/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,545 | INFO     | extracted standard info from prmon json
[2025-10-12 09:32:44] 2025-10-12 13:32:03,545 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:32:44] 2025-10-12 13:32:03,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:32:44] 2025-10-12 13:32:03,546 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:32:44] 2025-10-12 13:32:03,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:32:44] 2025-10-12 13:32:03,548 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:32:44] 2025-10-12 13:32:03,548 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,549 | INFO     | sum of deviations: -5521171732.0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,549 | INFO     | mean x: 1760273857.0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,549 | INFO     | mean y: 2897532.492063492
[2025-10-12 09:32:44] 2025-10-12 13:32:03,549 | INFO     | -- intersect: 125380758983.20258
[2025-10-12 09:32:44] 2025-10-12 13:32:03,550 | INFO     | intersect: 125380758983.20258
[2025-10-12 09:32:44] 2025-10-12 13:32:03,550 | INFO     | chi2: 0.06684883252374042
[2025-10-12 09:32:44] 2025-10-12 13:32:03,550 | INFO     | -- intersect: 125380758983.20258
[2025-10-12 09:32:44] 2025-10-12 13:32:03,550 | INFO     | current memory leak: -71.23 B/s (using 63 data points, chi2=0.07)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,550 | INFO     | could have reported an average CPU frequency of 2024 MHz (6 samples)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,550 | INFO     | ..............................
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . Timing measurements:
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . get job = 0 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . initial setup = 2 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . payload setup = 7 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . stage-in = 0 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . payload execution = 4255 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . stage-out = 0 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | . log creation = 0 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,551 | INFO     | ..............................
[2025-10-12 09:32:44] 2025-10-12 13:32:03,637 | INFO     | 
[2025-10-12 09:32:44] 2025-10-12 13:32:03,637 | INFO     | job summary report
[2025-10-12 09:32:44] 2025-10-12 13:32:03,638 | INFO     | --------------------------------------------------
[2025-10-12 09:32:44] 2025-10-12 13:32:03,638 | INFO     | PanDA job id: 6839659692
[2025-10-12 09:32:44] 2025-10-12 13:32:03,638 | INFO     | task id: 46676269
[2025-10-12 09:32:44] 2025-10-12 13:32:03,638 | INFO     | errors: (none)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:32:44] 2025-10-12 13:32:03,638 | INFO     | pilot state: finished 
[2025-10-12 09:32:44] 2025-10-12 13:32:03,639 | INFO     | transexitcode: 0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,639 | INFO     | exeerrorcode: 0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,639 | INFO     | exeerrordiag: 
[2025-10-12 09:32:44] 2025-10-12 13:32:03,639 | INFO     | exitcode: 0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,639 | INFO     | exitmsg: OK
[2025-10-12 09:32:44] 2025-10-12 13:32:03,639 | INFO     | cpuconsumptiontime: 46348 s
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | nevents: 400
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | neventsw: 0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | pid: 28350
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | pgrp: 28350
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | corecount: 12
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | event service: False
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | sizes: {0: 2348630, 1: 2348885, 6: 2349147, 12: 2349175, 4266: 2375225, 4267: 2375224, 4268: 2384406, 4271: 2384462, 4276: 2384656}
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | --------------------------------------------------
[2025-10-12 09:32:44] 2025-10-12 13:32:03,640 | INFO     | 
[2025-10-12 09:32:44] 2025-10-12 13:32:03,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:32:44] 2025-10-12 13:32:03,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:32:44] 2025-10-12 13:32:03,666 | INFO     | job 6839659692 has completed (purged errors)
[2025-10-12 09:32:44] 2025-10-12 13:32:03,666 | INFO     | overall cleanup function is called
[2025-10-12 09:32:44] 2025-10-12 13:32:04,671 | INFO     | --- collectZombieJob: --- 10, [28350]
[2025-10-12 09:32:44] 2025-10-12 13:32:04,672 | INFO     | zombie collector waiting for pid 28350
[2025-10-12 09:32:44] 2025-10-12 13:32:04,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:32:44] 2025-10-12 13:32:04,672 | INFO     | collected zombie processes
[2025-10-12 09:32:44] 2025-10-12 13:32:04,672 | INFO     | will attempt to kill all subprocesses of pid=28350
[2025-10-12 09:32:44] 2025-10-12 13:32:04,766 | INFO     | process IDs to be killed: [28350] (in reverse order)
[2025-10-12 09:32:44] 2025-10-12 13:32:04,818 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:32:44] 2025-10-12 13:32:04,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:32:44] 2025-10-12 13:32:04,822 | INFO     | did not find any defunct processes belonging to 28350
[2025-10-12 09:32:44] 2025-10-12 13:32:04,826 | INFO     | did not find any defunct processes belonging to 28350
[2025-10-12 09:32:44] 2025-10-12 13:32:04,826 | INFO     | ready for new job
[2025-10-12 09:32:44] 2025-10-12 13:32:04,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:32:44] 2025-10-12 13:32:04,828 | INFO     | ***************************************
[2025-10-12 09:32:44] 2025-10-12 13:32:04,828 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:32:44] 2025-10-12 13:32:04,828 | INFO     | ***************************************
[2025-10-12 09:32:44] 2025-10-12 13:32:04,828 | INFO     | 
[2025-10-12 09:32:44] 2025-10-12 13:32:04,829 | INFO     | architecture information:
[2025-10-12 09:32:44] 2025-10-12 13:32:04,829 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:32:44] 2025-10-12 13:32:04,844 | INFO     | cat /etc/os-release:
[2025-10-12 09:32:44] NAME="CentOS Linux"
[2025-10-12 09:32:44] VERSION="7 (Core)"
[2025-10-12 09:32:44] ID="centos"
[2025-10-12 09:32:44] ID_LIKE="rhel fedora"
[2025-10-12 09:32:44] VERSION_ID="7"
[2025-10-12 09:32:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:32:44] ANSI_COLOR="0;31"
[2025-10-12 09:32:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:32:44] HOME_URL="https://www.centos.org/"
[2025-10-12 09:32:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:32:44] 
[2025-10-12 09:32:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:32:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:32:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:32:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:32:44] 
[2025-10-12 09:32:44] 2025-10-12 13:32:04,845 | INFO     | ***************************************
[2025-10-12 09:32:44] 2025-10-12 13:32:05,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:32:44] 2025-10-12 13:32:05,370 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-10-12 09:32:44] 2025-10-12 13:32:05,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:32:44] 2025-10-12 13:32:05,371 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:32:44] 2025-10-12 13:32:05,371 | INFO     | update_server=False
[2025-10-12 09:32:44] 2025-10-12 13:32:05,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:32:44] 2025-10-12 13:32:05,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:32:44] 2025-10-12 13:32:05,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:32:44] 2025-10-12 13:32:05,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:32:44] 2025-10-12 13:32:05,884 | INFO     | aborting loop
[2025-10-12 09:32:44] 2025-10-12 13:32:06,021 | INFO     | all data control threads have been joined
[2025-10-12 09:32:44] 2025-10-12 13:32:06,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:32:44] 2025-10-12 13:32:06,376 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:06,377 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:06,407 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:06,645 | INFO     | all payload control threads have been joined
[2025-10-12 09:32:44] 2025-10-12 13:32:06,745 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:06,815 | INFO     | all job control threads have been joined
[2025-10-12 09:32:44] 2025-10-12 13:32:06,890 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:06,909 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,001 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,026 | INFO     | [data] control thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,074 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,650 | INFO     | [payload] control thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,705 | INFO     | [job] validate thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,788 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:07,821 | INFO     | [job] control thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:08,125 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:09,378 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:15,596 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:32:44] 2025-10-12 13:32:16,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:32:44] 2025-10-12 13:32:35,414 | INFO     | PID=21989 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 09:32:44] 2025-10-12 13:32:35,415 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:32:44] 2025-10-12 13:32:35,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:32:44] 2025-10-12 13:32:35,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:32:44] 2025-10-12 13:32:38,481 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:32:44] 2025-10-12 13:32:38,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270721738560)>', '<ExcThread(monitor, started 140269999613696)>']
[2025-10-12 09:32:44] 2025-10-12 13:32:39,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:32:44] 2025-10-12 13:32:39,436 | INFO     | [monitor] control thread has ended
[2025-10-12 09:32:44] 2025-10-12 13:32:43,768 | INFO     | all workflow threads have been joined
[2025-10-12 09:32:44] 2025-10-12 13:32:43,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:32:44] 2025-10-12 13:32:43,768 | INFO     | traces error code: 0
[2025-10-12 09:32:44] 2025-10-12 13:32:43,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:32:44] 2025-10-12 13:32:43,852 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:32:44] 2025-10-12 13:32:43,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:32:44] 2025-10-12 13:32:43,860 [wrapper] pilotpid: 21989
[2025-10-12 09:32:44] 2025-10-12 13:32:43,864 [wrapper] Pilot exit status: 0
[2025-10-12 09:32:44] 2025-10-12 13:32:43,879 [wrapper] pandaids: 6839659692
[2025-10-12 09:32:44] 2025-10-12 13:32:43,918 [wrapper] cleanup supervisor_pilot  9699 21990
[2025-10-12 09:32:44] 2025-10-12 13:32:43,922 [wrapper] Test setup, not cleaning
[2025-10-12 09:32:44] 2025-10-12 13:32:43,926 [wrapper] apfmon messages muted
[2025-10-12 09:32:44] 2025-10-12 13:32:43,930 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:32:44] 2025-10-12 13:32:43,933 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:32:44]  *** Error codes and diagnostics ***
[2025-10-12 09:32:44]     "exeErrorCode": 0,
[2025-10-12 09:32:44]     "exeErrorDiag": "",
[2025-10-12 09:32:44]     "pilotErrorCode": 0,
[2025-10-12 09:32:44]     "pilotErrorDiag": "",
[2025-10-12 09:32:44]  *** Listing of results directory ***
[2025-10-12 09:32:44] total 410780
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:41 queuedata.json
[2025-10-12 09:32:44] -rwx------ 1 boincer umatlas     36292 Oct 12 03:42 runpilot2-wrapper.sh
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:32:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:20 run_atlas
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:20 job.xml
[2025-10-12 09:32:44] -rw-r--r-- 2 boincer umatlas 221534161 Oct 12 08:20 EVNT.46676267._003507.pool.root.1
[2025-10-12 09:32:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:20 start_atlas.sh
[2025-10-12 09:32:44] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:20 shared
[2025-10-12 09:32:44] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 08:20 input.tar.gz
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:20 boinc_lockfile
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 08:20 pandaJob.out
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas    975512 Oct 12 08:20 agis_schedconf.cvmfs.json
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas   1560580 Oct 12 08:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:32:44] drwx------ 5 boincer umatlas      4096 Oct 12 08:20 pilot3
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 09:30 init_data.xml
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas 193199428 Oct 12 09:31 HITS.46676269._073671.pool.root.1
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:31 boinc_task_state.xml
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas      1049 Oct 12 09:31 memory_monitor_summary.json
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas    375127 Oct 12 09:31 log.46676269._073671.job.log.tgz.1
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas      7855 Oct 12 09:32 heartbeat.json
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:32 wrapper_checkpoint.txt
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:32 boinc_mmap_file
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas        95 Oct 12 09:32 pilot_heartbeat.json
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas      4818 Oct 12 09:32 pilotlog.txt
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas    625547 Oct 12 09:32 log.46676269._073671.job.log.1
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas       357 Oct 12 09:32 output.list
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:32 runtime_log
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas   1024000 Oct 12 09:32 result.tar.gz
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 09:32 runtime_log.err
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas       659 Oct 12 09:32 66MODmkt5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo1iNDmoJHJam.diag
[2025-10-12 09:32:44] -rw-r--r-- 1 boincer umatlas     22023 Oct 12 09:32 stderr.txt
[2025-10-12 09:32:44] HITS file was successfully produced:
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas 193199428 Oct 12 09:31 shared/HITS.pool.root.1
[2025-10-12 09:32:44]  *** Contents of shared directory: ***
[2025-10-12 09:32:44] total 406596
[2025-10-12 09:32:44] -rw-r--r-- 2 boincer umatlas 221534161 Oct 12 08:20 ATLAS.root_0
[2025-10-12 09:32:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:20 start_atlas.sh
[2025-10-12 09:32:44] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 08:20 input.tar.gz
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas 193199428 Oct 12 09:31 HITS.pool.root.1
[2025-10-12 09:32:44] -rw------- 1 boincer umatlas   1024000 Oct 12 09:32 result.tar.gz
09:32:45 (18296): run_atlas exited; CPU time 46324.205230
09:32:45 (18296): called boinc_finish(0)

</stderr_txt>
]]>

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