Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:34:47 (6404): wrapper (7.7.26015): starting
08:34:47 (6404): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 08:34:47] Arguments: --nthreads 4
[2025-10-12 08:34:47] Threads: 4
[2025-10-12 08:34:47] Checking for CVMFS
[2025-10-12 08:34:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:34:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:34:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:34:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:34:48] 2.11.2.0 2311 42650 65240 151620 0 59 10167523 20275201 1 130560 0 22476945 99.989 1382115 55815 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:34:48] CVMFS is ok
[2025-10-12 08:34:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:34:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:34:48] Further information can be found at the LHC@home message board.
[2025-10-12 08:34:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:34:48] Checking for apptainer binary...
[2025-10-12 08:34:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:34:48] Running /usr/bin/apptainer --version
[2025-10-12 08:34:48] apptainer version 1.3.2-1.el7
[2025-10-12 08:34:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:34:48] c-205-34.aglt2.org
[2025-10-12 08:34:48] apptainer works
[2025-10-12 08:34:48] Set ATHENA_PROC_NUMBER=4
[2025-10-12 08:34:48] Set ATHENA_CORE_NUMBER=4
[2025-10-12 08:34:48] Starting ATLAS job with PandaID=6839387572
[2025-10-12 08:34:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:07:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:07:12]  lfn=log.46676269._071463.job.log.tgz.1
[2025-10-12 10:07:12]  mtime=0
[2025-10-12 10:07:12]  protocol_id=None
[2025-10-12 10:07:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 10:07:12]  replicas=None
[2025-10-12 10:07:12]  scope=mc23_13p6TeV
[2025-10-12 10:07:12]  status=None
[2025-10-12 10:07:12]  status_code=0
[2025-10-12 10:07:12]  storage_token=
[2025-10-12 10:07:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839387572/log.46676269._071463.job.log.tgz.1
[2025-10-12 10:07:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/95/log.46676269._071463.job.log.tgz.1
[2025-10-12 10:07:12]  workdir=None
[2025-10-12 10:07:12] ]
[2025-10-12 10:07:12] 2025-10-12 14:06:06,130 | INFO     | transferring file log.46676269._071463.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839387572/log.46676269._071463.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:07:12] 2025-10-12 14:06:06,130 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839387572/log.46676269._071463.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._071463.job
[2025-10-12 10:07:12] 2025-10-12 14:06:06,141 | INFO     | adding to output.list: log.46676269._071463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/95/log.46676269._071463.job.log.tg
[2025-10-12 10:07:12] 2025-10-12 14:06:06,141 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:07:12] 2025-10-12 14:06:06,141 | INFO     | summary of transferred files:
[2025-10-12 10:07:12] 2025-10-12 14:06:06,142 | INFO     |  -- lfn=log.46676269._071463.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:07:12] 2025-10-12 14:06:06,142 | INFO     | stage-out finished correctly
[2025-10-12 10:07:12] 2025-10-12 14:06:07,245 | INFO     | time since job start (5469s) is within the limit (172800.0s)
[2025-10-12 10:07:12] 2025-10-12 14:06:07,662 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:07:12] 2025-10-12 14:06:08,065 | INFO     | monitor loop #416: job 0:6839387572 is in state 'finished'
[2025-10-12 10:07:12] 2025-10-12 14:06:08,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:07:12] 2025-10-12 14:06:09,251 | INFO     | time since job start (5471s) is within the limit (172800.0s)
[2025-10-12 10:07:12] 2025-10-12 14:06:09,405 | INFO     | job 6839387572 has state=finished
[2025-10-12 10:07:12] 2025-10-12 14:06:09,406 | INFO     | preparing for final server update for job 6839387572 in state='finished'
[2025-10-12 10:07:12] 2025-10-12 14:06:09,406 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:07:12] 2025-10-12 14:06:09,406 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:07:12] 2025-10-12 14:06:09,407 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:07:12] 2025-10-12 14:06:09,407 | INFO     | job 6839387572 has finished - writing final server update
[2025-10-12 10:07:12] 2025-10-12 14:06:09,407 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:07:12] 2025-10-12 14:06:09,408 | INFO     | executing command: lscpu
[2025-10-12 10:07:12] 2025-10-12 14:06:09,432 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:07:12] 2025-10-12 14:06:10,568 | INFO     | monitor loop #417: job 0:6839387572 is in state 'finished'
[2025-10-12 10:07:12] 2025-10-12 14:06:10,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:07:12] 2025-10-12 14:06:11,254 | INFO     | time since job start (5473s) is within the limit (172800.0s)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,403 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:07:12] 2025-10-12 14:06:12,404 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3299.926
[2025-10-12 10:07:12] 2025-10-12 14:06:12,404 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839387572/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,405 | INFO     | extracted standard info from prmon json
[2025-10-12 10:07:12] 2025-10-12 14:06:12,405 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:07:12] 2025-10-12 14:06:12,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:07:12] 2025-10-12 14:06:12,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:07:12] 2025-10-12 14:06:12,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:07:12] 2025-10-12 14:06:12,406 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:07:12] 2025-10-12 14:06:12,406 | INFO     | sum of square deviations: 177275882.0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,406 | INFO     | sum of deviations: -13701456195.999998
[2025-10-12 10:07:12] 2025-10-12 14:06:12,406 | INFO     | mean x: 1760275326.0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,406 | INFO     | mean y: 2469554.7108433736
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | -- intersect: 136052196116.43579
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | intersect: 136052196116.43579
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | chi2: 0.08000781910348259
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | -- intersect: 136052196116.43579
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | current memory leak: -77.29 B/s (using 83 data points, chi2=0.08)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | could have reported an average CPU frequency of 2996 MHz (6 samples)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | ..............................
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . Timing measurements:
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . get job = 0 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . initial setup = 2 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . payload setup = 3 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . stage-in = 0 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . payload execution = 5447 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . stage-out = 0 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | . log creation = 0 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,407 | INFO     | ..............................
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | 
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | job summary report
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | --------------------------------------------------
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | PanDA job id: 6839387572
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | task id: 46676269
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | errors: (none)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:07:12] 2025-10-12 14:06:12,447 | INFO     | pilot state: finished 
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | transexitcode: 0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | exeerrorcode: 0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | exeerrordiag: 
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | exitcode: 0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | exitmsg: OK
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | cpuconsumptiontime: 20870 s
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | nevents: 400
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | neventsw: 0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | pid: 17624
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | pgrp: 17624
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | corecount: 4
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | event service: False
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | sizes: {0: 2348029, 1: 2348771, 4: 2349147, 11: 2349175, 5454: 2384843, 5456: 2384843, 5461: 2385165}
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | --------------------------------------------------
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | 
[2025-10-12 10:07:12] 2025-10-12 14:06:12,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | job 6839387572 has completed (purged errors)
[2025-10-12 10:07:12] 2025-10-12 14:06:12,461 | INFO     | overall cleanup function is called
[2025-10-12 10:07:12] 2025-10-12 14:06:13,467 | INFO     | --- collectZombieJob: --- 10, [17624]
[2025-10-12 10:07:12] 2025-10-12 14:06:13,467 | INFO     | zombie collector waiting for pid 17624
[2025-10-12 10:07:12] 2025-10-12 14:06:13,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:07:12] 2025-10-12 14:06:13,467 | INFO     | collected zombie processes
[2025-10-12 10:07:12] 2025-10-12 14:06:13,468 | INFO     | will attempt to kill all subprocesses of pid=17624
[2025-10-12 10:07:12] 2025-10-12 14:06:13,519 | INFO     | process IDs to be killed: [17624] (in reverse order)
[2025-10-12 10:07:12] 2025-10-12 14:06:13,542 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:07:12] 2025-10-12 14:06:13,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:07:12] 2025-10-12 14:06:13,543 | INFO     | did not find any defunct processes belonging to 17624
[2025-10-12 10:07:12] 2025-10-12 14:06:13,543 | INFO     | did not find any defunct processes belonging to 17624
[2025-10-12 10:07:12] 2025-10-12 14:06:13,544 | INFO     | ready for new job
[2025-10-12 10:07:12] 2025-10-12 14:06:13,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:07:12] 2025-10-12 14:06:13,545 | INFO     | ***************************************
[2025-10-12 10:07:12] 2025-10-12 14:06:13,545 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:07:12] 2025-10-12 14:06:13,545 | INFO     | ***************************************
[2025-10-12 10:07:12] 2025-10-12 14:06:13,545 | INFO     | 
[2025-10-12 10:07:12] 2025-10-12 14:06:13,545 | INFO     | architecture information:
[2025-10-12 10:07:12] 2025-10-12 14:06:13,545 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:07:12] 2025-10-12 14:06:13,554 | INFO     | cat /etc/os-release:
[2025-10-12 10:07:12] NAME="CentOS Linux"
[2025-10-12 10:07:12] VERSION="7 (Core)"
[2025-10-12 10:07:12] ID="centos"
[2025-10-12 10:07:12] ID_LIKE="rhel fedora"
[2025-10-12 10:07:12] VERSION_ID="7"
[2025-10-12 10:07:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:07:12] ANSI_COLOR="0;31"
[2025-10-12 10:07:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:07:12] HOME_URL="https://www.centos.org/"
[2025-10-12 10:07:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:07:12] 
[2025-10-12 10:07:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:07:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:07:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:07:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:07:12] 
[2025-10-12 10:07:12] 2025-10-12 14:06:13,554 | INFO     | ***************************************
[2025-10-12 10:07:12] 2025-10-12 14:06:14,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:07:12] 2025-10-12 14:06:14,075 | INFO     | sufficient remaining disk space (29366419456 B)
[2025-10-12 10:07:12] 2025-10-12 14:06:14,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:07:12] 2025-10-12 14:06:14,076 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:07:12] 2025-10-12 14:06:14,076 | INFO     | update_server=False
[2025-10-12 10:07:12] 2025-10-12 14:06:14,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:07:12] 2025-10-12 14:06:14,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:07:12] 2025-10-12 14:06:14,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:07:12] 2025-10-12 14:06:14,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:07:12] 2025-10-12 14:06:14,078 | INFO     | aborting loop
[2025-10-12 10:07:12] 2025-10-12 14:06:14,124 | INFO     | all job control threads have been joined
[2025-10-12 10:07:12] 2025-10-12 14:06:14,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:07:12] 2025-10-12 14:06:14,197 | INFO     | all data control threads have been joined
[2025-10-12 10:07:12] 2025-10-12 14:06:15,077 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,082 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,083 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,130 | INFO     | [job] control thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,202 | INFO     | [data] control thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,395 | INFO     | all payload control threads have been joined
[2025-10-12 10:07:12] 2025-10-12 14:06:15,647 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,800 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,932 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,933 | INFO     | [job] validate thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:15,949 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:16,043 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:16,200 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:16,345 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:16,400 | INFO     | [payload] control thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:18,081 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:07:12] 2025-10-12 14:06:44,370 | INFO     | PID=10050 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:07:12] 2025-10-12 14:06:44,371 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:07:12] 2025-10-12 14:06:44,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:07:12] 2025-10-12 14:06:44,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:07:12] 2025-10-12 14:07:06,694 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:07:12] 2025-10-12 14:07:07,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557328017216)>', '<ExcThread(monitor, started 140556739004160)>']
[2025-10-12 10:07:12] 2025-10-12 14:07:07,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:07:12] 2025-10-12 14:07:07,480 | INFO     | [monitor] control thread has ended
[2025-10-12 10:07:12] 2025-10-12 14:07:12,189 | INFO     | all workflow threads have been joined
[2025-10-12 10:07:12] 2025-10-12 14:07:12,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:07:12] 2025-10-12 14:07:12,204 | INFO     | traces error code: 0
[2025-10-12 10:07:12] 2025-10-12 14:07:12,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:07:12] 2025-10-12 14:07:12,264 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:07:12] 2025-10-12 14:07:12,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:07:12] 2025-10-12 14:07:12,268 [wrapper] pilotpid: 10050
[2025-10-12 10:07:12] 2025-10-12 14:07:12,270 [wrapper] Pilot exit status: 0
[2025-10-12 10:07:12] 2025-10-12 14:07:12,276 [wrapper] pandaids: 6839387572
[2025-10-12 10:07:12] 2025-10-12 14:07:12,291 [wrapper] cleanup supervisor_pilot 17872 10051
[2025-10-12 10:07:12] 2025-10-12 14:07:12,293 [wrapper] Test setup, not cleaning
[2025-10-12 10:07:12] 2025-10-12 14:07:12,295 [wrapper] apfmon messages muted
[2025-10-12 10:07:12] 2025-10-12 14:07:12,297 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:07:12] 2025-10-12 14:07:12,299 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:07:12]  *** Error codes and diagnostics ***
[2025-10-12 10:07:12]     "exeErrorCode": 0,
[2025-10-12 10:07:12]     "exeErrorDiag": "",
[2025-10-12 10:07:12]     "pilotErrorCode": 0,
[2025-10-12 10:07:12]     "pilotErrorDiag": "",
[2025-10-12 10:07:12]  *** Listing of results directory ***
[2025-10-12 10:07:12] total 408096
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 10:07:12] -rwx------ 1 boincer umatlas     36292 Oct 12 00:56 runpilot2-wrapper.sh
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:56 queuedata.json
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:07:12] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:34 run_atlas
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:34 job.xml
[2025-10-12 10:07:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:34 start_atlas.sh
[2025-10-12 10:07:12] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:34 shared
[2025-10-12 10:07:12] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 08:34 input.tar.gz
[2025-10-12 10:07:12] -rw-r--r-- 2 boincer umatlas 219122999 Oct 12 08:34 EVNT.46676267._004306.pool.root.1
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:34 boinc_lockfile
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 08:34 pandaJob.out
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas    975512 Oct 12 08:34 agis_schedconf.cvmfs.json
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas   1560580 Oct 12 08:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:07:12] drwx------ 5 boincer umatlas      4096 Oct 12 08:34 pilot3
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas      6237 Oct 12 10:03 init_data.xml
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas 192729383 Oct 12 10:05 HITS.46676269._071463.pool.root.1
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas      1042 Oct 12 10:06 memory_monitor_summary.json
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:06 boinc_task_state.xml
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas    275534 Oct 12 10:06 log.46676269._071463.job.log.tgz.1
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas      7832 Oct 12 10:06 heartbeat.json
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:06 boinc_mmap_file
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:06 wrapper_checkpoint.txt
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas        95 Oct 12 10:06 pilot_heartbeat.json
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas      4746 Oct 12 10:07 pilotlog.txt
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas    790457 Oct 12 10:07 log.46676269._071463.job.log.1
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas       357 Oct 12 10:07 output.list
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:07 runtime_log
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas   1085440 Oct 12 10:07 result.tar.gz
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 10:07 runtime_log.err
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas       656 Oct 12 10:07 Em4LDmzI3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOfiNDmBRqqHm.diag
[2025-10-12 10:07:12] -rw-r--r-- 1 boincer umatlas     21611 Oct 12 10:07 stderr.txt
[2025-10-12 10:07:12] HITS file was successfully produced:
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas 192729383 Oct 12 10:05 shared/HITS.pool.root.1
[2025-10-12 10:07:12]  *** Contents of shared directory: ***
[2025-10-12 10:07:12] total 403848
[2025-10-12 10:07:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:34 start_atlas.sh
[2025-10-12 10:07:12] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 08:34 input.tar.gz
[2025-10-12 10:07:12] -rw-r--r-- 2 boincer umatlas 219122999 Oct 12 08:34 ATLAS.root_0
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas 192729383 Oct 12 10:05 HITS.pool.root.1
[2025-10-12 10:07:12] -rw------- 1 boincer umatlas   1085440 Oct 12 10:07 result.tar.gz
10:07:13 (6404): run_atlas exited; CPU time 20883.233120
10:07:13 (6404): called boinc_finish(0)

</stderr_txt>
]]>

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