Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:10 (30355): wrapper (7.7.26015): starting
22:53:10 (30355): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:53:10] Arguments: --nthreads 8
[2025-10-12 22:53:10] Threads: 8
[2025-10-12 22:53:10] Checking for CVMFS
[2025-10-12 22:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:53:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:53:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:53:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:53:11] 2.11.2.0 18352 221094 145176 151636 3 204 15610028 25165824 3778 130560 0 115418934 99.858 78139130 4401 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 22:53:11] CVMFS is ok
[2025-10-12 22:53:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:53:11] Checking for apptainer binary...
[2025-10-12 22:53:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:53:11] Running /usr/bin/apptainer --version
[2025-10-12 22:53:11] apptainer version 1.3.2-1.el7
[2025-10-12 22:53:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:53:14] cg-vwn313.simple-grid.lan
[2025-10-12 22:53:14] apptainer works
[2025-10-12 22:53:14] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:53:14] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:53:14] Starting ATLAS job with PandaID=6839474238
[2025-10-12 22:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:08:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:08:39] 2025-10-13 01:07:45,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:08:39] 2025-10-13 01:07:45,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:08:39] 2025-10-13 01:07:45,778 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:08:39] 2025-10-13 01:07:45,778 | INFO     | sum of square deviations: 4449281562.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,780 | INFO     | sum of deviations: 77044883801.99998
[2025-10-13 03:08:39] 2025-10-13 01:07:45,781 | INFO     | mean x: 1760310121.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,781 | INFO     | mean y: 2439030.4485596707
[2025-10-13 03:08:39] 2025-10-13 01:07:45,781 | INFO     | -- intersect: -30479535831.795403
[2025-10-13 03:08:39] 2025-10-13 01:07:45,781 | INFO     | intersect: -30479535831.795403
[2025-10-13 03:08:39] 2025-10-13 01:07:45,781 | INFO     | chi2: 5.551384000752811
[2025-10-13 03:08:39] 2025-10-13 01:07:45,782 | INFO     | sum of square deviations: 4180243959.5
[2025-10-13 03:08:39] 2025-10-13 01:07:45,784 | INFO     | sum of deviations: 91740652625.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,784 | INFO     | mean x: 1760309968.5
[2025-10-13 03:08:39] 2025-10-13 01:07:45,784 | INFO     | mean y: 2447204.050420168
[2025-10-13 03:08:39] 2025-10-13 01:07:45,784 | INFO     | -- intersect: -38629744337.18185
[2025-10-13 03:08:39] 2025-10-13 01:07:45,784 | INFO     | intersect: -38629744337.18185
[2025-10-13 03:08:39] 2025-10-13 01:07:45,785 | INFO     | chi2: 4.774972464837179
[2025-10-13 03:08:39] 2025-10-13 01:07:45,785 | INFO     | current chi2=4.774972464837179 (change=13.985909384224618 %)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,785 | INFO     | right removable region: 237
[2025-10-13 03:08:39] 2025-10-13 01:07:45,786 | INFO     | sum of square deviations: 4180243959.5
[2025-10-13 03:08:39] 2025-10-13 01:07:45,788 | INFO     | sum of deviations: -3056921304.000004
[2025-10-13 03:08:39] 2025-10-13 01:07:45,788 | INFO     | mean x: 1760310273.5
[2025-10-13 03:08:39] 2025-10-13 01:07:45,794 | INFO     | mean y: 2484384.0840336136
[2025-10-13 03:08:39] 2025-10-13 01:07:45,795 | INFO     | -- intersect: 1289760923.1680977
[2025-10-13 03:08:39] 2025-10-13 01:07:45,795 | INFO     | intersect: 1289760923.1680977
[2025-10-13 03:08:39] 2025-10-13 01:07:45,795 | INFO     | chi2: 1.3097973271322503
[2025-10-13 03:08:39] 2025-10-13 01:07:45,795 | INFO     | current chi2=1.3097973271322503 (change=76.40593180088727 %)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,796 | INFO     | sum of square deviations: 3922276332.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,797 | INFO     | sum of deviations: -21625882870.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,798 | INFO     | mean x: 1760310426.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,798 | INFO     | mean y: 2495251.5622317595
[2025-10-13 03:08:39] 2025-10-13 01:07:45,798 | INFO     | -- intersect: 9708151830.864101
[2025-10-13 03:08:39] 2025-10-13 01:07:45,798 | INFO     | intersect: 9708151830.864101
[2025-10-13 03:08:39] 2025-10-13 01:07:45,798 | INFO     | chi2: 0.899772965690254
[2025-10-13 03:08:39] 2025-10-13 01:07:45,798 | INFO     | current chi2=0.899772965690254 (change=31.304412747560605 %)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,799 | INFO     | sum of square deviations: 3675146117.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,801 | INFO     | sum of deviations: -14147438145.499998
[2025-10-13 03:08:39] 2025-10-13 01:07:45,801 | INFO     | mean x: 1760310578.5
[2025-10-13 03:08:39] 2025-10-13 01:07:45,801 | INFO     | mean y: 2490632.293859649
[2025-10-13 03:08:39] 2025-10-13 01:07:45,801 | INFO     | -- intersect: 6778788562.599543
[2025-10-13 03:08:39] 2025-10-13 01:07:45,801 | INFO     | intersect: 6778788562.599543
[2025-10-13 03:08:39] 2025-10-13 01:07:45,802 | INFO     | chi2: 0.8696037592651124
[2025-10-13 03:08:39] 2025-10-13 01:07:45,802 | INFO     | current chi2=0.8696037592651124 (change=3.3529798710942122 %)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,802 | INFO     | left removable region: 30
[2025-10-13 03:08:39] 2025-10-13 01:07:45,802 | INFO     | sum of square deviations: 2750295288.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,804 | INFO     | sum of deviations: 3348071925.0000005
[2025-10-13 03:08:39] 2025-10-13 01:07:45,804 | INFO     | mean x: 1760310853.0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,804 | INFO     | mean y: 2499303.0966183576
[2025-10-13 03:08:39] 2025-10-13 01:07:45,804 | INFO     | -- intersect: -2140415085.739037
[2025-10-13 03:08:39] 2025-10-13 01:07:45,804 | INFO     | intersect: -2140415085.739037
[2025-10-13 03:08:39] 2025-10-13 01:07:45,805 | INFO     | chi2: 0.00010552418028469123
[2025-10-13 03:08:39] 2025-10-13 01:07:45,805 | INFO     | -- intersect: -2140415085.739037
[2025-10-13 03:08:39] 2025-10-13 01:07:45,805 | INFO     | current memory leak: 1.22 B/s (using 207 data points, chi2=0.00)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,806 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,806 | INFO     | ..............................
[2025-10-13 03:08:39] 2025-10-13 01:07:45,806 | INFO     | . Timing measurements:
[2025-10-13 03:08:39] 2025-10-13 01:07:45,806 | INFO     | . get job = 0 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,806 | INFO     | . initial setup = 2 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,807 | INFO     | . payload setup = 109 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,807 | INFO     | . stage-in = 0 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,807 | INFO     | . payload execution = 14967 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,807 | INFO     | . stage-out = 5 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,807 | INFO     | . log creation = 1 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,807 | INFO     | ..............................
[2025-10-13 03:08:39] 2025-10-13 01:07:45,936 | INFO     | 
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | job summary report
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | --------------------------------------------------
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | PanDA job id: 6839474238
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | task id: 46676269
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | errors: (none)
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | pilot state: finished 
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | transexitcode: 0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,937 | INFO     | exeerrorcode: 0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | exeerrordiag: 
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | exitcode: 0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | exitmsg: OK
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | cpuconsumptiontime: 56824 s
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | nevents: 400
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | neventsw: 0
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | pid: 19411
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | pgrp: 19411
[2025-10-13 03:08:39] 2025-10-13 01:07:45,938 | INFO     | corecount: 8
[2025-10-13 03:08:39] 2025-10-13 01:07:45,939 | INFO     | event service: False
[2025-10-13 03:08:39] 2025-10-13 01:07:45,939 | INFO     | sizes: {0: 2347979, 1: 2348836, 2: 2348836, 12: 2348864, 14: 2349154, 23: 2349182, 15082: 2379640, 15083: 2379639, 15090: 2388695, 15091: 2388751, 15187: 2388945}
[2025-10-13 03:08:39] 2025-10-13 01:07:45,939 | INFO     | --------------------------------------------------
[2025-10-13 03:08:39] 2025-10-13 01:07:45,939 | INFO     | 
[2025-10-13 03:08:39] 2025-10-13 01:07:45,939 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:08:39] 2025-10-13 01:07:46,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:08:39] 2025-10-13 01:07:46,316 | INFO     | job 6839474238 has completed (purged errors)
[2025-10-13 03:08:39] 2025-10-13 01:07:46,316 | INFO     | overall cleanup function is called
[2025-10-13 03:08:39] 2025-10-13 01:07:47,325 | INFO     | --- collectZombieJob: --- 10, [19411]
[2025-10-13 03:08:39] 2025-10-13 01:07:47,326 | INFO     | zombie collector waiting for pid 19411
[2025-10-13 03:08:39] 2025-10-13 01:07:47,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:08:39] 2025-10-13 01:07:47,326 | INFO     | collected zombie processes
[2025-10-13 03:08:39] 2025-10-13 01:07:47,326 | INFO     | will attempt to kill all subprocesses of pid=19411
[2025-10-13 03:08:39] 2025-10-13 01:07:47,461 | INFO     | process IDs to be killed: [19411] (in reverse order)
[2025-10-13 03:08:39] 2025-10-13 01:07:48,050 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:08:39] 2025-10-13 01:07:48,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:08:39] 2025-10-13 01:07:48,053 | INFO     | did not find any defunct processes belonging to 19411
[2025-10-13 03:08:39] 2025-10-13 01:07:48,056 | INFO     | did not find any defunct processes belonging to 19411
[2025-10-13 03:08:39] 2025-10-13 01:07:48,057 | INFO     | ready for new job
[2025-10-13 03:08:39] 2025-10-13 01:07:48,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:08:39] 2025-10-13 01:07:48,059 | INFO     | ***************************************
[2025-10-13 03:08:39] 2025-10-13 01:07:48,059 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:08:39] 2025-10-13 01:07:48,059 | INFO     | ***************************************
[2025-10-13 03:08:39] 2025-10-13 01:07:48,059 | INFO     | 
[2025-10-13 03:08:39] 2025-10-13 01:07:48,060 | INFO     | pilot is running in a VM
[2025-10-13 03:08:39] 2025-10-13 01:07:48,060 | INFO     | architecture information:
[2025-10-13 03:08:39] 2025-10-13 01:07:48,070 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:08:39] 2025-10-13 01:07:48,124 | INFO     | cat /etc/os-release:
[2025-10-13 03:08:39] NAME="CentOS Linux"
[2025-10-13 03:08:39] VERSION="7 (Core)"
[2025-10-13 03:08:39] ID="centos"
[2025-10-13 03:08:39] ID_LIKE="rhel fedora"
[2025-10-13 03:08:39] VERSION_ID="7"
[2025-10-13 03:08:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:08:39] ANSI_COLOR="0;31"
[2025-10-13 03:08:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:08:39] HOME_URL="https://www.centos.org/"
[2025-10-13 03:08:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:08:39] 
[2025-10-13 03:08:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:08:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:08:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:08:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:08:39] 
[2025-10-13 03:08:39] 2025-10-13 01:07:48,125 | INFO     | ***************************************
[2025-10-13 03:08:39] 2025-10-13 01:07:48,628 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-13 03:08:39] 2025-10-13 01:07:48,885 | INFO     | sufficient remaining disk space (496129540096 B)
[2025-10-13 03:08:39] 2025-10-13 01:07:48,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:08:39] 2025-10-13 01:07:48,886 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:08:39] 2025-10-13 01:07:48,886 | INFO     | update_server=False
[2025-10-13 03:08:39] 2025-10-13 01:07:48,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:08:39] 2025-10-13 01:07:48,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:08:39] 2025-10-13 01:07:48,888 | INFO     | aborting loop
[2025-10-13 03:08:39] 2025-10-13 01:07:49,269 | INFO     | all data control threads have been joined
[2025-10-13 03:08:39] 2025-10-13 01:07:49,345 | INFO     | all job control threads have been joined
[2025-10-13 03:08:39] 2025-10-13 01:07:49,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:08:39] 2025-10-13 01:07:49,892 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:49,893 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,098 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,163 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,183 | INFO     | all payload control threads have been joined
[2025-10-13 03:08:39] 2025-10-13 01:07:50,275 | INFO     | [data] control thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,351 | INFO     | [job] control thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,380 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,444 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,495 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,886 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:50,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:08:39] 2025-10-13 01:07:51,079 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:51,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:08:39] 2025-10-13 01:07:51,189 | INFO     | [payload] control thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:51,232 | INFO     | [job] validate thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:51,577 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:51,955 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:07:55,148 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:08:39] 2025-10-13 01:08:17,720 | INFO     | PID=5833 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 03:08:39] 2025-10-13 01:08:17,720 | INFO     | .. there are 9 such processes running
[2025-10-13 03:08:39] 2025-10-13 01:08:17,721 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:08:39] 2025-10-13 01:08:17,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:08:39] 2025-10-13 01:08:17,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:08:39] 2025-10-13 01:08:28,323 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:08:39] 2025-10-13 01:08:30,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340835125056)>', '<ExcThread(monitor, started 140340616177408)>']
[2025-10-13 03:08:39] 2025-10-13 01:08:30,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:08:39] 2025-10-13 01:08:30,798 | INFO     | [monitor] control thread has ended
[2025-10-13 03:08:39] 2025-10-13 01:08:35,052 | INFO     | all workflow threads have been joined
[2025-10-13 03:08:39] 2025-10-13 01:08:35,052 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:08:39] 2025-10-13 01:08:35,053 | INFO     | traces error code: 0
[2025-10-13 03:08:39] 2025-10-13 01:08:35,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:08:39] 2025-10-13 01:08:35,441 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:08:39] 2025-10-13 01:08:35,541 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:08:39] 2025-10-13 01:08:35,591 [wrapper] pilotpid: 5833
[2025-10-13 03:08:39] 2025-10-13 01:08:35,680 [wrapper] Pilot exit status: 0
[2025-10-13 03:08:39] 2025-10-13 01:08:36,068 [wrapper] pandaids: 6839474238
[2025-10-13 03:08:39] 2025-10-13 01:08:36,889 [wrapper] cleanup supervisor_pilot 13731 5834
[2025-10-13 03:08:39] 2025-10-13 01:08:36,931 [wrapper] Test setup, not cleaning
[2025-10-13 03:08:39] 2025-10-13 01:08:36,991 [wrapper] apfmon messages muted
[2025-10-13 03:08:39] 2025-10-13 01:08:37,067 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:08:39] 2025-10-13 01:08:37,208 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:08:39]  *** Error codes and diagnostics ***
[2025-10-13 03:08:39]     "exeErrorCode": 0,
[2025-10-13 03:08:39]     "exeErrorDiag": "",
[2025-10-13 03:08:39]     "pilotErrorCode": 0,
[2025-10-13 03:08:39]     "pilotErrorDiag": "",
[2025-10-13 03:08:39]  *** Listing of results directory ***
[2025-10-13 03:08:39] total 416168
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:07 queuedata.json
[2025-10-13 03:08:39] -rwx------. 1 boinc boinc     36292 Oct 12 07:08 runpilot2-wrapper.sh
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc       100 Oct 12 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:08:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 22:53 run_atlas
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc       105 Oct 12 22:53 job.xml
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc      6390 Oct 12 22:53 init_data.xml
[2025-10-13 03:08:39] -rw-r--r--. 2 boinc boinc 222685220 Oct 12 22:53 EVNT.46676267._001595.pool.root.1
[2025-10-13 03:08:39] -rw-r--r--. 2 boinc boinc     15120 Oct 12 22:53 start_atlas.sh
[2025-10-13 03:08:39] drwxrwx--x. 2 boinc boinc        68 Oct 12 22:53 shared
[2025-10-13 03:08:39] -rw-r--r--. 2 boinc boinc    569686 Oct 12 22:53 input.tar.gz
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc         0 Oct 12 22:53 boinc_lockfile
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc      2550 Oct 12 22:53 pandaJob.out
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc    975536 Oct 12 22:53 agis_schedconf.cvmfs.json
[2025-10-13 03:08:39] drwx------. 5 boinc boinc      4096 Oct 12 22:54 pilot3
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc 194537796 Oct 13 03:04 HITS.46676269._071604.pool.root.1
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc       531 Oct 13 03:05 boinc_task_state.xml
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc      1013 Oct 13 03:05 memory_monitor_summary.json
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc   1560580 Oct 13 03:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc    467675 Oct 13 03:06 log.46676269._071604.job.log.tgz.1
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc      7774 Oct 13 03:07 heartbeat.json
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc        28 Oct 13 03:08 wrapper_checkpoint.txt
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc      8192 Oct 13 03:08 boinc_mmap_file
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc        95 Oct 13 03:08 pilot_heartbeat.json
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc      4884 Oct 13 03:08 pilotlog.txt
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc   2052326 Oct 13 03:08 log.46676269._071604.job.log.1
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc       357 Oct 13 03:08 output.list
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc       620 Oct 13 03:08 runtime_log
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc   2539520 Oct 13 03:08 result.tar.gz
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc      8717 Oct 13 03:08 runtime_log.err
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc       656 Oct 13 03:08 lUNODm4U3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNhiNDml4cXPo.diag
[2025-10-13 03:08:39] -rw-r--r--. 1 boinc boinc     20616 Oct 13 03:08 stderr.txt
[2025-10-13 03:08:39] HITS file was successfully produced:
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc 194537796 Oct 13 03:04 shared/HITS.pool.root.1
[2025-10-13 03:08:39]  *** Contents of shared directory: ***
[2025-10-13 03:08:39] total 410504
[2025-10-13 03:08:39] -rw-r--r--. 2 boinc boinc 222685220 Oct 12 22:53 ATLAS.root_0
[2025-10-13 03:08:39] -rw-r--r--. 2 boinc boinc     15120 Oct 12 22:53 start_atlas.sh
[2025-10-13 03:08:39] -rw-r--r--. 2 boinc boinc    569686 Oct 12 22:53 input.tar.gz
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc 194537796 Oct 13 03:04 HITS.pool.root.1
[2025-10-13 03:08:39] -rw-------. 1 boinc boinc   2539520 Oct 13 03:08 result.tar.gz
03:08:41 (30355): run_atlas exited; CPU time 57030.288172
03:08:41 (30355): called boinc_finish(0)

</stderr_txt>
]]>

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