Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:25:29 (18981): wrapper (7.7.26015): starting
08:25:29 (18981): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:25:29] Arguments: --nthreads 8
[2025-10-12 08:25:29] Threads: 8
[2025-10-12 08:25:29] Checking for CVMFS
[2025-10-12 08:25:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:25:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:25:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:25:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:25:30] 2.11.2.0 3101 198635 79732 151620 1 56 12243461 20275200 1 130560 1 68815477 99.977 9034098 26085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:25:30] CVMFS is ok
[2025-10-12 08:25:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:25:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:25:30] Further information can be found at the LHC@home message board.
[2025-10-12 08:25:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:25:30] Checking for apptainer binary...
[2025-10-12 08:25:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:25:30] Running /usr/bin/apptainer --version
[2025-10-12 08:25:30] apptainer version 1.3.2-1.el7
[2025-10-12 08:25:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:25:31] c-204-29.aglt2.org
[2025-10-12 08:25:31] apptainer works
[2025-10-12 08:25:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:25:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:25:31] Starting ATLAS job with PandaID=6839316701
[2025-10-12 08:25:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:36:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:36:08] 2025-10-12 14:35:04,250 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:36:08] 2025-10-12 14:35:04,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:36:08] 2025-10-12 14:35:04,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:36:08] 2025-10-12 14:35:04,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:36:08] 2025-10-12 14:35:04,254 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:36:08] 2025-10-12 14:35:04,255 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,255 | INFO     | sum of deviations: -15562070449.000004
[2025-10-12 10:36:08] 2025-10-12 14:35:04,255 | INFO     | mean x: 1760275824.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,256 | INFO     | mean y: 2546501.9606299214
[2025-10-12 10:36:08] 2025-10-12 14:35:04,256 | INFO     | -- intersect: 43133140730.68705
[2025-10-12 10:36:08] 2025-10-12 14:35:04,256 | INFO     | intersect: 43133140730.68705
[2025-10-12 10:36:08] 2025-10-12 14:35:04,256 | INFO     | chi2: 2.343257514506158
[2025-10-12 10:36:08] 2025-10-12 14:35:04,256 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 10:36:08] 2025-10-12 14:35:04,257 | INFO     | sum of deviations: -6004337970.000018
[2025-10-12 10:36:08] 2025-10-12 14:35:04,257 | INFO     | mean x: 1760275671.5
[2025-10-12 10:36:08] 2025-10-12 14:35:04,257 | INFO     | mean y: 2566151.704918033
[2025-10-12 10:36:08] 2025-10-12 14:35:04,257 | INFO     | -- intersect: 18774848598.56187
[2025-10-12 10:36:08] 2025-10-12 14:35:04,258 | INFO     | intersect: 18774848598.56187
[2025-10-12 10:36:08] 2025-10-12 14:35:04,258 | INFO     | chi2: 1.576284213337484
[2025-10-12 10:36:08] 2025-10-12 14:35:04,258 | INFO     | current chi2=1.576284213337484 (change=32.73107186985011 %)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,258 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,259 | INFO     | sum of deviations: -5007643842.000001
[2025-10-12 10:36:08] 2025-10-12 14:35:04,259 | INFO     | mean x: 1760275519.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,259 | INFO     | mean y: 2568441.247863248
[2025-10-12 10:36:08] 2025-10-12 14:35:04,259 | INFO     | -- intersect: 17753036110.89096
[2025-10-12 10:36:08] 2025-10-12 14:35:04,259 | INFO     | intersect: 17753036110.89096
[2025-10-12 10:36:08] 2025-10-12 14:35:04,259 | INFO     | chi2: 1.5775539364815157
[2025-10-12 10:36:08] 2025-10-12 14:35:04,260 | INFO     | current chi2=1.5775539364815157 (change=-0.08055166278315587 %)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,260 | INFO     | right removable region: 116
[2025-10-12 10:36:08] 2025-10-12 14:35:04,260 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | sum of deviations: -34270362298.000004
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | mean x: 1760275976.5
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | mean y: 2585354.8852459015
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | -- intersect: 107147292281.39809
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | intersect: 107147292281.39809
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | chi2: 0.9224301659117901
[2025-10-12 10:36:08] 2025-10-12 14:35:04,261 | INFO     | current chi2=0.9224301659117901 (change=60.634707871354365 %)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,262 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,262 | INFO     | sum of deviations: -32619183676.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,262 | INFO     | mean x: 1760276129.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,262 | INFO     | mean y: 2581469.658119658
[2025-10-12 10:36:08] 2025-10-12 14:35:04,263 | INFO     | -- intersect: 115627011674.03609
[2025-10-12 10:36:08] 2025-10-12 14:35:04,263 | INFO     | intersect: 115627011674.03609
[2025-10-12 10:36:08] 2025-10-12 14:35:04,263 | INFO     | chi2: 0.9083556092775685
[2025-10-12 10:36:08] 2025-10-12 14:35:04,263 | INFO     | current chi2=0.9083556092775685 (change=1.5258127015294773 %)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,263 | INFO     | left removable region: 20
[2025-10-12 10:36:08] 2025-10-12 14:35:04,263 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,264 | INFO     | sum of deviations: -16047311571.499998
[2025-10-12 10:36:08] 2025-10-12 14:35:04,264 | INFO     | mean x: 1760276098.5
[2025-10-12 10:36:08] 2025-10-12 14:35:04,264 | INFO     | mean y: 2592700.0104166665
[2025-10-12 10:36:08] 2025-10-12 14:35:04,264 | INFO     | -- intersect: 102979081688.15254
[2025-10-12 10:36:08] 2025-10-12 14:35:04,264 | INFO     | intersect: 102979081688.15254
[2025-10-12 10:36:08] 2025-10-12 14:35:04,265 | INFO     | chi2: 0.09267863776334871
[2025-10-12 10:36:08] 2025-10-12 14:35:04,265 | INFO     | -- intersect: 102979081688.15254
[2025-10-12 10:36:08] 2025-10-12 14:35:04,265 | INFO     | current memory leak: -58.50 B/s (using 96 data points, chi2=0.09)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,265 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,266 | INFO     | ..............................
[2025-10-12 10:36:08] 2025-10-12 14:35:04,266 | INFO     | . Timing measurements:
[2025-10-12 10:36:08] 2025-10-12 14:35:04,266 | INFO     | . get job = 0 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,266 | INFO     | . initial setup = 2 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,266 | INFO     | . payload setup = 8 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,266 | INFO     | . stage-in = 0 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,267 | INFO     | . payload execution = 7716 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,267 | INFO     | . stage-out = 0 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,267 | INFO     | . log creation = 0 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,267 | INFO     | ..............................
[2025-10-12 10:36:08] 2025-10-12 14:35:04,397 | INFO     | 
[2025-10-12 10:36:08] 2025-10-12 14:35:04,398 | INFO     | job summary report
[2025-10-12 10:36:08] 2025-10-12 14:35:04,398 | INFO     | --------------------------------------------------
[2025-10-12 10:36:08] 2025-10-12 14:35:04,398 | INFO     | PanDA job id: 6839316701
[2025-10-12 10:36:08] 2025-10-12 14:35:04,398 | INFO     | task id: 46676269
[2025-10-12 10:36:08] 2025-10-12 14:35:04,399 | INFO     | errors: (none)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:36:08] 2025-10-12 14:35:04,399 | INFO     | pilot state: finished 
[2025-10-12 10:36:08] 2025-10-12 14:35:04,399 | INFO     | transexitcode: 0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,399 | INFO     | exeerrorcode: 0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,399 | INFO     | exeerrordiag: 
[2025-10-12 10:36:08] 2025-10-12 14:35:04,400 | INFO     | exitcode: 0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,400 | INFO     | exitmsg: OK
[2025-10-12 10:36:08] 2025-10-12 14:35:04,400 | INFO     | cpuconsumptiontime: 58232 s
[2025-10-12 10:36:08] 2025-10-12 14:35:04,400 | INFO     | nevents: 400
[2025-10-12 10:36:08] 2025-10-12 14:35:04,400 | INFO     | neventsw: 0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,400 | INFO     | pid: 29712
[2025-10-12 10:36:08] 2025-10-12 14:35:04,401 | INFO     | pgrp: 29712
[2025-10-12 10:36:08] 2025-10-12 14:35:04,401 | INFO     | corecount: 8
[2025-10-12 10:36:08] 2025-10-12 14:35:04,401 | INFO     | event service: False
[2025-10-12 10:36:08] 2025-10-12 14:35:04,401 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7728: 2376778, 7729: 2376777, 7730: 2386015, 7737: 2386153}
[2025-10-12 10:36:08] 2025-10-12 14:35:04,401 | INFO     | --------------------------------------------------
[2025-10-12 10:36:08] 2025-10-12 14:35:04,401 | INFO     | 
[2025-10-12 10:36:08] 2025-10-12 14:35:04,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:36:08] 2025-10-12 14:35:04,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,435 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:36:08] 2025-10-12 14:35:04,436 | INFO     | job 6839316701 has completed (purged errors)
[2025-10-12 10:36:08] 2025-10-12 14:35:04,436 | INFO     | overall cleanup function is called
[2025-10-12 10:36:08] 2025-10-12 14:35:05,442 | INFO     | --- collectZombieJob: --- 10, [29712]
[2025-10-12 10:36:08] 2025-10-12 14:35:05,442 | INFO     | zombie collector waiting for pid 29712
[2025-10-12 10:36:08] 2025-10-12 14:35:05,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:36:08] 2025-10-12 14:35:05,443 | INFO     | collected zombie processes
[2025-10-12 10:36:08] 2025-10-12 14:35:05,443 | INFO     | will attempt to kill all subprocesses of pid=29712
[2025-10-12 10:36:08] 2025-10-12 14:35:05,547 | INFO     | process IDs to be killed: [29712] (in reverse order)
[2025-10-12 10:36:08] 2025-10-12 14:35:05,608 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:36:08] 2025-10-12 14:35:05,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:36:08] 2025-10-12 14:35:05,613 | INFO     | did not find any defunct processes belonging to 29712
[2025-10-12 10:36:08] 2025-10-12 14:35:05,617 | INFO     | did not find any defunct processes belonging to 29712
[2025-10-12 10:36:08] 2025-10-12 14:35:05,617 | INFO     | ready for new job
[2025-10-12 10:36:08] 2025-10-12 14:35:05,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:36:08] 2025-10-12 14:35:05,620 | INFO     | ***************************************
[2025-10-12 10:36:08] 2025-10-12 14:35:05,620 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:36:08] 2025-10-12 14:35:05,620 | INFO     | ***************************************
[2025-10-12 10:36:08] 2025-10-12 14:35:05,620 | INFO     | 
[2025-10-12 10:36:08] 2025-10-12 14:35:05,620 | INFO     | architecture information:
[2025-10-12 10:36:08] 2025-10-12 14:35:05,621 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:36:08] 2025-10-12 14:35:05,640 | INFO     | cat /etc/os-release:
[2025-10-12 10:36:08] NAME="CentOS Linux"
[2025-10-12 10:36:08] VERSION="7 (Core)"
[2025-10-12 10:36:08] ID="centos"
[2025-10-12 10:36:08] ID_LIKE="rhel fedora"
[2025-10-12 10:36:08] VERSION_ID="7"
[2025-10-12 10:36:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:36:08] ANSI_COLOR="0;31"
[2025-10-12 10:36:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:36:08] HOME_URL="https://www.centos.org/"
[2025-10-12 10:36:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:36:08] 
[2025-10-12 10:36:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:36:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:36:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:36:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:36:08] 
[2025-10-12 10:36:08] 2025-10-12 14:35:05,640 | INFO     | ***************************************
[2025-10-12 10:36:08] 2025-10-12 14:35:06,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:36:08] 2025-10-12 14:35:06,166 | INFO     | sufficient remaining disk space (18567135232 B)
[2025-10-12 10:36:08] 2025-10-12 14:35:06,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:36:08] 2025-10-12 14:35:06,168 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:36:08] 2025-10-12 14:35:06,168 | INFO     | update_server=False
[2025-10-12 10:36:08] 2025-10-12 14:35:06,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:36:08] 2025-10-12 14:35:06,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:36:08] 2025-10-12 14:35:06,641 | INFO     | all data control threads have been joined
[2025-10-12 10:36:08] 2025-10-12 14:35:06,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:36:08] 2025-10-12 14:35:06,712 | INFO     | aborting loop
[2025-10-12 10:36:08] 2025-10-12 14:35:06,746 | INFO     | all payload control threads have been joined
[2025-10-12 10:36:08] 2025-10-12 14:35:06,879 | INFO     | all job control threads have been joined
[2025-10-12 10:36:08] 2025-10-12 14:35:07,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:36:08] 2025-10-12 14:35:07,170 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,174 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,254 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:36:08] 2025-10-12 14:35:07,523 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,646 | INFO     | [data] control thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,718 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,752 | INFO     | [payload] control thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,831 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,885 | INFO     | [job] control thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:07,906 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:08,140 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:08,382 | INFO     | [job] validate thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:08,390 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:09,150 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:11,408 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:36:08] 2025-10-12 14:35:35,954 | INFO     | PID=22733 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:36:08] 2025-10-12 14:35:35,955 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:36:08] 2025-10-12 14:35:35,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:36:08] 2025-10-12 14:35:35,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:36:08] 2025-10-12 14:36:02,187 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:36:08] 2025-10-12 14:36:03,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338746726208)>', '<ExcThread(monitor, started 140337653741312)>']
[2025-10-12 10:36:08] 2025-10-12 14:36:04,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:36:08] 2025-10-12 14:36:04,100 | INFO     | [monitor] control thread has ended
[2025-10-12 10:36:08] 2025-10-12 14:36:08,604 | INFO     | all workflow threads have been joined
[2025-10-12 10:36:08] 2025-10-12 14:36:08,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:36:08] 2025-10-12 14:36:08,605 | INFO     | traces error code: 0
[2025-10-12 10:36:08] 2025-10-12 14:36:08,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:36:08] 2025-10-12 14:36:08,735 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:36:08] 2025-10-12 14:36:08,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:36:08] 2025-10-12 14:36:08,745 [wrapper] pilotpid: 22733
[2025-10-12 10:36:08] 2025-10-12 14:36:08,749 [wrapper] Pilot exit status: 0
[2025-10-12 10:36:08] 2025-10-12 14:36:08,768 [wrapper] pandaids: 6839316701
[2025-10-12 10:36:08] 2025-10-12 14:36:08,819 [wrapper] cleanup supervisor_pilot 14707 22734
[2025-10-12 10:36:08] 2025-10-12 14:36:08,824 [wrapper] Test setup, not cleaning
[2025-10-12 10:36:08] 2025-10-12 14:36:08,828 [wrapper] apfmon messages muted
[2025-10-12 10:36:08] 2025-10-12 14:36:08,832 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:36:08] 2025-10-12 14:36:08,836 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:36:08]  *** Error codes and diagnostics ***
[2025-10-12 10:36:08]     "exeErrorCode": 0,
[2025-10-12 10:36:08]     "exeErrorDiag": "",
[2025-10-12 10:36:08]     "pilotErrorCode": 0,
[2025-10-12 10:36:08]     "pilotErrorDiag": "",
[2025-10-12 10:36:08]  *** Listing of results directory ***
[2025-10-12 10:36:08] total 423552
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:35 queuedata.json
[2025-10-12 10:36:08] -rwx------ 1 boincer umatlas     36292 Oct 11 22:38 runpilot2-wrapper.sh
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:36:08] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:25 run_atlas
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:25 job.xml
[2025-10-12 10:36:08] -rw-r--r-- 2 boincer umatlas 223241552 Oct 12 08:25 EVNT.46676267._003183.pool.root.1
[2025-10-12 10:36:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:25 start_atlas.sh
[2025-10-12 10:36:08] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:25 shared
[2025-10-12 10:36:08] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 08:25 input.tar.gz
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:25 boinc_lockfile
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 08:25 pandaJob.out
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas    975512 Oct 12 08:25 agis_schedconf.cvmfs.json
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas   1560580 Oct 12 08:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:36:08] drwx------ 5 boincer umatlas      4096 Oct 12 08:25 pilot3
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 10:27 init_data.xml
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas 203659326 Oct 12 10:34 HITS.46676269._069371.pool.root.1
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas       530 Oct 12 10:34 boinc_task_state.xml
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas        95 Oct 12 10:34 pilot_heartbeat.json
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas      1051 Oct 12 10:34 memory_monitor_summary.json
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas    372027 Oct 12 10:34 log.46676269._069371.job.log.tgz.1
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas      7850 Oct 12 10:35 heartbeat.json
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:36 boinc_mmap_file
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:36 wrapper_checkpoint.txt
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas      4746 Oct 12 10:36 pilotlog.txt
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas   1088440 Oct 12 10:36 log.46676269._069371.job.log.1
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas       357 Oct 12 10:36 output.list
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:36 runtime_log
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas   1474560 Oct 12 10:36 result.tar.gz
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 10:36 runtime_log.err
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas       660 Oct 12 10:36 EMBODmt90R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMMiNDmdPvxgn.diag
[2025-10-12 10:36:08] -rw-r--r-- 1 boincer umatlas     20877 Oct 12 10:36 stderr.txt
[2025-10-12 10:36:08] HITS file was successfully produced:
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas 203659326 Oct 12 10:34 shared/HITS.pool.root.1
[2025-10-12 10:36:08]  *** Contents of shared directory: ***
[2025-10-12 10:36:08] total 418920
[2025-10-12 10:36:08] -rw-r--r-- 2 boincer umatlas 223241552 Oct 12 08:25 ATLAS.root_0
[2025-10-12 10:36:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:25 start_atlas.sh
[2025-10-12 10:36:08] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 08:25 input.tar.gz
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas 203659326 Oct 12 10:34 HITS.pool.root.1
[2025-10-12 10:36:08] -rw------- 1 boincer umatlas   1474560 Oct 12 10:36 result.tar.gz
10:36:10 (18981): run_atlas exited; CPU time 58174.061097
10:36:10 (18981): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN