Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:44:42 (15466): wrapper (7.7.26015): starting
01:44:42 (15466): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:44:42] Arguments: --nthreads 8
[2025-10-13 01:44:42] Threads: 8
[2025-10-13 01:44:42] Checking for CVMFS
[2025-10-13 01:44:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:44:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:44:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:44:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:44:45] 2.11.2.0 14391 221073 142576 151641 2 155 20918057 25165825 4632 130560 0 110489320 99.878 62322674 3102 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 01:44:45] CVMFS is ok
[2025-10-13 01:44:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:44:45] Checking for apptainer binary...
[2025-10-13 01:44:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:44:45] Running /usr/bin/apptainer --version
[2025-10-13 01:44:45] apptainer version 1.3.2-1.el7
[2025-10-13 01:44:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:44:51] cg-vwn338.simple-grid.lan
[2025-10-13 01:44:51] apptainer works
[2025-10-13 01:44:51] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:44:51] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:44:51] Starting ATLAS job with PandaID=6839659059
[2025-10-13 01:44:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:54:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:54:14] 2025-10-13 03:53:38,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:54:14] 2025-10-13 03:53:38,294 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:54:14] 2025-10-13 03:53:38,295 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,296 | INFO     | sum of deviations: 94137637407.5
[2025-10-13 05:54:14] 2025-10-13 03:53:38,297 | INFO     | mean x: 1760320449.5
[2025-10-13 05:54:14] 2025-10-13 03:53:38,297 | INFO     | mean y: 2425183.0905172415
[2025-10-13 05:54:14] 2025-10-13 03:53:38,297 | INFO     | -- intersect: -42795303274.708916
[2025-10-13 05:54:14] 2025-10-13 03:53:38,297 | INFO     | intersect: -42795303274.708916
[2025-10-13 05:54:14] 2025-10-13 03:53:38,297 | INFO     | chi2: 6.72551682768694
[2025-10-13 05:54:14] 2025-10-13 03:53:38,298 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,300 | INFO     | sum of deviations: 107092655910.00002
[2025-10-13 05:54:14] 2025-10-13 03:53:38,300 | INFO     | mean x: 1760320297.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,300 | INFO     | mean y: 2433080.118942731
[2025-10-13 05:54:14] 2025-10-13 03:53:38,300 | INFO     | -- intersect: -51973682377.38057
[2025-10-13 05:54:14] 2025-10-13 03:53:38,300 | INFO     | intersect: -51973682377.38057
[2025-10-13 05:54:14] 2025-10-13 03:53:38,301 | INFO     | chi2: 6.011999143543238
[2025-10-13 05:54:14] 2025-10-13 03:53:38,301 | INFO     | current chi2=6.011999143543238 (change=10.609113060372747 %)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,301 | INFO     | right removable region: 226
[2025-10-13 05:54:14] 2025-10-13 03:53:38,301 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,303 | INFO     | sum of deviations: 16489801271.000002
[2025-10-13 05:54:14] 2025-10-13 03:53:38,303 | INFO     | mean x: 1760320602.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,303 | INFO     | mean y: 2473474.577092511
[2025-10-13 05:54:14] 2025-10-13 03:53:38,304 | INFO     | -- intersect: -8000652005.412098
[2025-10-13 05:54:14] 2025-10-13 03:53:38,304 | INFO     | intersect: -8000652005.412098
[2025-10-13 05:54:14] 2025-10-13 03:53:38,304 | INFO     | chi2: 2.180401589824381
[2025-10-13 05:54:14] 2025-10-13 03:53:38,304 | INFO     | current chi2=2.180401589824381 (change=67.58016304638002 %)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,305 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 05:54:14] 2025-10-13 03:53:38,306 | INFO     | sum of deviations: -21389586072.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,307 | INFO     | mean x: 1760320754.5
[2025-10-13 05:54:14] 2025-10-13 03:53:38,307 | INFO     | mean y: 2497952.2972972975
[2025-10-13 05:54:14] 2025-10-13 03:53:38,307 | INFO     | -- intersect: 11101032915.297634
[2025-10-13 05:54:14] 2025-10-13 03:53:38,307 | INFO     | intersect: 11101032915.297634
[2025-10-13 05:54:14] 2025-10-13 03:53:38,307 | INFO     | chi2: 0.8780998358699489
[2025-10-13 05:54:14] 2025-10-13 03:53:38,307 | INFO     | current chi2=0.8780998358699489 (change=59.72760981426936 %)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,308 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,310 | INFO     | sum of deviations: -18248461893.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,310 | INFO     | mean x: 1760320907.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,310 | INFO     | mean y: 2495776.3179723504
[2025-10-13 05:54:14] 2025-10-13 03:53:38,310 | INFO     | -- intersect: 10140902489.781607
[2025-10-13 05:54:14] 2025-10-13 03:53:38,310 | INFO     | intersect: 10140902489.781607
[2025-10-13 05:54:14] 2025-10-13 03:53:38,310 | INFO     | chi2: 0.85785545130727
[2025-10-13 05:54:14] 2025-10-13 03:53:38,311 | INFO     | current chi2=0.85785545130727 (change=2.3054764089122495 %)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,311 | INFO     | left removable region: 30
[2025-10-13 05:54:14] 2025-10-13 03:53:38,311 | INFO     | sum of square deviations: 2334722845.0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,313 | INFO     | sum of deviations: 5392907001.500001
[2025-10-13 05:54:14] 2025-10-13 03:53:38,313 | INFO     | mean x: 1760321181.5
[2025-10-13 05:54:14] 2025-10-13 03:53:38,313 | INFO     | mean y: 2498951.035714286
[2025-10-13 05:54:14] 2025-10-13 03:53:38,313 | INFO     | -- intersect: -4063614697.070601
[2025-10-13 05:54:14] 2025-10-13 03:53:38,313 | INFO     | intersect: -4063614697.070601
[2025-10-13 05:54:14] 2025-10-13 03:53:38,313 | INFO     | chi2: 0.0002062131882457028
[2025-10-13 05:54:14] 2025-10-13 03:53:38,314 | INFO     | -- intersect: -4063614697.070601
[2025-10-13 05:54:14] 2025-10-13 03:53:38,314 | INFO     | current memory leak: 2.31 B/s (using 196 data points, chi2=0.00)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,314 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | ..............................
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . Timing measurements:
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . get job = 0 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . initial setup = 10 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . payload setup = 143 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . stage-in = 0 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . payload execution = 14280 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . stage-out = 2 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | . log creation = 1 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,315 | INFO     | ..............................
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | 
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | job summary report
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | --------------------------------------------------
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | PanDA job id: 6839659059
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | task id: 46676269
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | errors: (none)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:54:14] 2025-10-13 03:53:38,495 | INFO     | pilot state: finished 
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | transexitcode: 0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | exeerrorcode: 0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | exeerrordiag: 
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | exitcode: 0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | exitmsg: OK
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | cpuconsumptiontime: 53690 s
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | nevents: 400
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | neventsw: 0
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | pid: 25819
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | pgrp: 25819
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | corecount: 8
[2025-10-13 05:54:14] 2025-10-13 03:53:38,496 | INFO     | event service: False
[2025-10-13 05:54:14] 2025-10-13 03:53:38,497 | INFO     | sizes: {0: 2348027, 1: 2348713, 2: 2348912, 13: 2348912, 23: 2348968, 34: 2348996, 45: 2349152, 55: 2349180, 66: 2349208, 77: 2349236, 88: 2349292, 90: 2349862, 98
[2025-10-13 05:54:14] 2025-10-13 03:53:38,497 | INFO     | --------------------------------------------------
[2025-10-13 05:54:14] 2025-10-13 03:53:38,497 | INFO     | 
[2025-10-13 05:54:14] 2025-10-13 03:53:38,497 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-10-13 05:54:14] 2025-10-13 03:53:38,949 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | job 6839659059 has completed (purged errors)
[2025-10-13 05:54:14] 2025-10-13 03:53:38,951 | INFO     | overall cleanup function is called
[2025-10-13 05:54:14] 2025-10-13 03:53:39,961 | INFO     | --- collectZombieJob: --- 10, [25819]
[2025-10-13 05:54:14] 2025-10-13 03:53:39,961 | INFO     | zombie collector waiting for pid 25819
[2025-10-13 05:54:14] 2025-10-13 03:53:39,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:54:14] 2025-10-13 03:53:39,961 | INFO     | collected zombie processes
[2025-10-13 05:54:14] 2025-10-13 03:53:39,961 | INFO     | will attempt to kill all subprocesses of pid=25819
[2025-10-13 05:54:14] 2025-10-13 03:53:40,087 | INFO     | process IDs to be killed: [25819] (in reverse order)
[2025-10-13 05:54:14] 2025-10-13 03:53:40,862 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:54:14] 2025-10-13 03:53:40,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:54:14] 2025-10-13 03:53:40,865 | INFO     | did not find any defunct processes belonging to 25819
[2025-10-13 05:54:14] 2025-10-13 03:53:40,869 | INFO     | did not find any defunct processes belonging to 25819
[2025-10-13 05:54:14] 2025-10-13 03:53:40,869 | INFO     | ready for new job
[2025-10-13 05:54:14] 2025-10-13 03:53:40,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:54:14] 2025-10-13 03:53:40,872 | INFO     | ***************************************
[2025-10-13 05:54:14] 2025-10-13 03:53:40,872 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:54:14] 2025-10-13 03:53:40,872 | INFO     | ***************************************
[2025-10-13 05:54:14] 2025-10-13 03:53:40,872 | INFO     | 
[2025-10-13 05:54:14] 2025-10-13 03:53:40,873 | INFO     | pilot is running in a VM
[2025-10-13 05:54:14] 2025-10-13 03:53:40,873 | INFO     | architecture information:
[2025-10-13 05:54:14] 2025-10-13 03:53:40,881 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:54:14] 2025-10-13 03:53:41,128 | INFO     | cat /etc/os-release:
[2025-10-13 05:54:14] NAME="CentOS Linux"
[2025-10-13 05:54:14] VERSION="7 (Core)"
[2025-10-13 05:54:14] ID="centos"
[2025-10-13 05:54:14] ID_LIKE="rhel fedora"
[2025-10-13 05:54:14] VERSION_ID="7"
[2025-10-13 05:54:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:54:14] ANSI_COLOR="0;31"
[2025-10-13 05:54:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:54:14] HOME_URL="https://www.centos.org/"
[2025-10-13 05:54:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:54:14] 
[2025-10-13 05:54:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:54:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:54:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:54:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:54:14] 
[2025-10-13 05:54:14] 2025-10-13 03:53:41,129 | INFO     | ***************************************
[2025-10-13 05:54:14] 2025-10-13 03:53:41,631 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-10-13 05:54:14] 2025-10-13 03:53:41,829 | INFO     | sufficient remaining disk space (495672360960 B)
[2025-10-13 05:54:14] 2025-10-13 03:53:41,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:54:14] 2025-10-13 03:53:41,829 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:54:14] 2025-10-13 03:53:41,829 | INFO     | update_server=False
[2025-10-13 05:54:14] 2025-10-13 03:53:41,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:54:14] 2025-10-13 03:53:42,465 | INFO     | all data control threads have been joined
[2025-10-13 05:54:14] 2025-10-13 03:53:42,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:54:14] 2025-10-13 03:53:42,643 | INFO     | aborting loop
[2025-10-13 05:54:14] 2025-10-13 03:53:42,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:54:14] 2025-10-13 03:53:42,829 | INFO     | all payload control threads have been joined
[2025-10-13 05:54:14] 2025-10-13 03:53:42,835 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,217 | INFO     | [job] validate thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,276 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:54:14] 2025-10-13 03:53:43,471 | INFO     | [data] control thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,487 | INFO     | all job control threads have been joined
[2025-10-13 05:54:14] 2025-10-13 03:53:43,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:54:14] 2025-10-13 03:53:43,649 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,721 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:43,835 | INFO     | [payload] control thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,164 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,202 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,277 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,310 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,493 | INFO     | [job] control thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,515 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:44,811 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:47,418 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:54:14] 2025-10-13 03:53:55,374 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:54:14] 2025-10-13 03:53:56,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826328880960)>', '<ExcThread(monitor, started 139825655039744)>']
[2025-10-13 05:54:14] 2025-10-13 03:54:01,539 | INFO     | all workflow threads have been joined
[2025-10-13 05:54:14] 2025-10-13 03:54:01,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:54:14] 2025-10-13 03:54:01,539 | INFO     | traces error code: 0
[2025-10-13 05:54:14] 2025-10-13 03:54:01,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:54:14] 2025-10-13 03:54:10,612 | INFO     | PID=19279 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:54:14] 2025-10-13 03:54:10,612 | INFO     | .. there are 9 such processes running
[2025-10-13 05:54:14] 2025-10-13 03:54:10,612 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:54:14] 2025-10-13 03:54:10,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:54:14] 2025-10-13 03:54:10,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:54:14] 2025-10-13 03:54:10,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:54:14] 2025-10-13 03:54:10,613 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 05:54:14] 2025-10-13 03:54:10,613 | INFO     | [monitor] control thread has ended
[2025-10-13 05:54:14] 2025-10-13 03:54:10,866 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:54:14] 2025-10-13 03:54:10,892 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:54:14] 2025-10-13 03:54:10,954 [wrapper] pilotpid: 19279
[2025-10-13 05:54:14] 2025-10-13 03:54:10,967 [wrapper] Pilot exit status: 0
[2025-10-13 05:54:14] 2025-10-13 03:54:11,478 [wrapper] pandaids: 6839659059
[2025-10-13 05:54:14] 2025-10-13 03:54:12,447 [wrapper] cleanup supervisor_pilot 19938 19280
[2025-10-13 05:54:14] 2025-10-13 03:54:12,548 [wrapper] Test setup, not cleaning
[2025-10-13 05:54:14] 2025-10-13 03:54:12,635 [wrapper] apfmon messages muted
[2025-10-13 05:54:14] 2025-10-13 03:54:12,688 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:54:14] 2025-10-13 03:54:12,791 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:54:14]  *** Error codes and diagnostics ***
[2025-10-13 05:54:14]     "exeErrorCode": 0,
[2025-10-13 05:54:14]     "exeErrorDiag": "",
[2025-10-13 05:54:14]     "pilotErrorCode": 0,
[2025-10-13 05:54:14]     "pilotErrorDiag": "",
[2025-10-13 05:54:14]  *** Listing of results directory ***
[2025-10-13 05:54:14] total 412996
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-13 05:54:14] -rwx------. 1 boinc boinc     36292 Oct 12 09:35 runpilot2-wrapper.sh
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc      5112 Oct 12 09:35 queuedata.json
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:54:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:44 run_atlas
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:44 job.xml
[2025-10-13 05:54:14] -rw-r--r--. 2 boinc boinc 220401935 Oct 13 01:44 EVNT.46676267._003502.pool.root.1
[2025-10-13 05:54:14] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:44 start_atlas.sh
[2025-10-13 05:54:14] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:44 shared
[2025-10-13 05:54:14] -rw-r--r--. 2 boinc boinc    569675 Oct 13 01:44 input.tar.gz
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc      6389 Oct 13 01:44 init_data.xml
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:44 boinc_lockfile
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc      2549 Oct 13 01:44 pandaJob.out
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc    975603 Oct 13 01:48 agis_schedconf.cvmfs.json
[2025-10-13 05:54:14] drwx------. 5 boinc boinc      4096 Oct 13 01:48 pilot3
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc 193800184 Oct 13 05:50 HITS.46676269._073540.pool.root.1
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc       531 Oct 13 05:50 boinc_task_state.xml
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc      1027 Oct 13 05:51 memory_monitor_summary.json
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc   1560580 Oct 13 05:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc    445626 Oct 13 05:52 log.46676269._073540.job.log.tgz.1
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc        95 Oct 13 05:53 pilot_heartbeat.json
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc      7778 Oct 13 05:53 heartbeat.json
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc        28 Oct 13 05:53 wrapper_checkpoint.txt
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc      8192 Oct 13 05:53 boinc_mmap_file
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc       890 Oct 13 05:54 pilotlog.txt
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc   1964110 Oct 13 05:54 log.46676269._073540.job.log.1
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc       357 Oct 13 05:54 output.list
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc       620 Oct 13 05:54 runtime_log
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc   2426880 Oct 13 05:54 result.tar.gz
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc       656 Oct 13 05:54 xeMMDmOn5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmASTMDmDxE2dm.diag
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc      8717 Oct 13 05:54 runtime_log.err
[2025-10-13 05:54:14] -rw-r--r--. 1 boinc boinc     20602 Oct 13 05:54 stderr.txt
[2025-10-13 05:54:14] HITS file was successfully produced:
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc 193800184 Oct 13 05:50 shared/HITS.pool.root.1
[2025-10-13 05:54:14]  *** Contents of shared directory: ***
[2025-10-13 05:54:14] total 407448
[2025-10-13 05:54:14] -rw-r--r--. 2 boinc boinc 220401935 Oct 13 01:44 ATLAS.root_0
[2025-10-13 05:54:14] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:44 start_atlas.sh
[2025-10-13 05:54:14] -rw-r--r--. 2 boinc boinc    569675 Oct 13 01:44 input.tar.gz
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc 193800184 Oct 13 05:50 HITS.pool.root.1
[2025-10-13 05:54:14] -rw-------. 1 boinc boinc   2426880 Oct 13 05:54 result.tar.gz
05:54:16 (15466): run_atlas exited; CPU time 53895.590340
05:54:16 (15466): called boinc_finish(0)

</stderr_txt>
]]>

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