Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:14:40 (3227748): wrapper (7.7.26015): starting
00:14:40 (3227748): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 00:14:40] Arguments: --nthreads 3
[2025-10-13 00:14:40] Threads: 3
[2025-10-13 00:14:40] Checking for CVMFS
[2025-10-13 00:14:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:14:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:14:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:14:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:14:40] 2.9.2.0 1774758 4749 81464 151640 2 16 27795921 36864001 0 130560 0 3796419 99.991 170503 929 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 00:14:40] CVMFS is ok
[2025-10-13 00:14:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:14:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:14:40] Further information can be found at the LHC@home message board.
[2025-10-13 00:14:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:14:40] Checking for apptainer binary...
[2025-10-13 00:14:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:14:40] Running /usr/bin/apptainer --version
[2025-10-13 00:14:40] apptainer version 1.4.1-1.1
[2025-10-13 00:14:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:14:40] legendA269a
[2025-10-13 00:14:40] apptainer works
[2025-10-13 00:14:40] Set ATHENA_PROC_NUMBER=3
[2025-10-13 00:14:40] Set ATHENA_CORE_NUMBER=3
[2025-10-13 00:14:40] Starting ATLAS job with PandaID=6839866275
[2025-10-13 00:14:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:40:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:40:09]  status=None
[2025-10-13 01:40:09]  status_code=0
[2025-10-13 01:40:09]  storage_token=
[2025-10-13 01:40:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839866275/log.46676269._075993.job.log.tgz.1
[2025-10-13 01:40:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/9b/log.46676269._075993.job.log.tgz.1
[2025-10-13 01:40:09]  workdir=None
[2025-10-13 01:40:09] ]
[2025-10-13 01:40:09] 2025-10-12 23:39:28,827 | INFO     | transferring file log.46676269._075993.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839866275/log.46676269._075993.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 01:40:09] 2025-10-12 23:39:28,827 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839866275/log.46676269._075993.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0759
[2025-10-13 01:40:09] 2025-10-12 23:39:28,841 | INFO     | adding to output.list: log.46676269._075993.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/9b/log.46676269._075993.job.log.tg
[2025-10-13 01:40:09] 2025-10-12 23:39:28,841 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:40:09] 2025-10-12 23:39:28,841 | INFO     | summary of transferred files:
[2025-10-13 01:40:09] 2025-10-12 23:39:28,841 | INFO     |  -- lfn=log.46676269._075993.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:40:09] 2025-10-12 23:39:28,841 | INFO     | stage-out finished correctly
[2025-10-13 01:40:09] 2025-10-12 23:39:28,871 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:40:09] 2025-10-12 23:39:29,157 | INFO     | monitor loop #392: job 0:6839866275 is in state 'finished'
[2025-10-13 01:40:09] 2025-10-12 23:39:29,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:40:09] 2025-10-12 23:39:30,269 | INFO     | time since job start (5083s) is within the limit (172800.0s)
[2025-10-13 01:40:09] 2025-10-12 23:39:31,327 | INFO     | PID=3231473 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:40:09] 2025-10-12 23:39:31,661 | INFO     | monitor loop #393: job 0:6839866275 is in state 'finished'
[2025-10-13 01:40:09] 2025-10-12 23:39:31,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:40:09] 2025-10-12 23:39:31,889 | INFO     | job 6839866275 has state=finished
[2025-10-13 01:40:09] 2025-10-12 23:39:31,889 | INFO     | preparing for final server update for job 6839866275 in state='finished'
[2025-10-13 01:40:09] 2025-10-12 23:39:31,889 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:40:09] 2025-10-12 23:39:31,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:40:09] 2025-10-12 23:39:31,890 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:40:09] 2025-10-12 23:39:31,890 | INFO     | job 6839866275 has finished - writing final server update
[2025-10-13 01:40:09] 2025-10-12 23:39:31,890 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:40:09] 2025-10-12 23:39:31,890 | INFO     | executing command: lscpu
[2025-10-13 01:40:09] 2025-10-12 23:39:31,907 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:40:09] 2025-10-12 23:39:32,328 | INFO     | time since job start (5085s) is within the limit (172800.0s)
[2025-10-13 01:40:09] 2025-10-12 23:39:34,164 | INFO     | monitor loop #394: job 0:6839866275 is in state 'finished'
[2025-10-13 01:40:09] 2025-10-12 23:39:34,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:40:09] 2025-10-12 23:39:34,333 | INFO     | time since job start (5087s) is within the limit (172800.0s)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,336 | INFO     | time since job start (5089s) is within the limit (172800.0s)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,667 | INFO     | monitor loop #395: job 0:6839866275 is in state 'finished'
[2025-10-13 01:40:09] 2025-10-12 23:39:36,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,767 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:40:09] 2025-10-12 23:39:36,768 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3758.959666666667
[2025-10-13 01:40:09] 2025-10-12 23:39:36,769 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839866275/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,770 | INFO     | extracted standard info from prmon json
[2025-10-13 01:40:09] 2025-10-12 23:39:36,770 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:40:09] 2025-10-12 23:39:36,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:40:09] 2025-10-12 23:39:36,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:40:09] 2025-10-12 23:39:36,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | sum of square deviations: 136095575.0
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | sum of deviations: -9808184601.499998
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | mean x: 1760309899.5
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | mean y: 2549780.5921052634
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | -- intersect: 126865193552.39665
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | intersect: 126865193552.39665
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | chi2: 0.07908780630847755
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | -- intersect: 126865193552.39665
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | current memory leak: -72.07 B/s (using 76 data points, chi2=0.08)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | could have reported an average CPU frequency of 3865 MHz (6 samples)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | ..............................
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | . Timing measurements:
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | . get job = 0 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | . initial setup = 1 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | . payload setup = 3 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,771 | INFO     | . stage-in = 0 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,772 | INFO     | . payload execution = 5060 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,772 | INFO     | . stage-out = 0 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,772 | INFO     | . log creation = 0 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,772 | INFO     | ..............................
[2025-10-13 01:40:09] 2025-10-12 23:39:36,802 | INFO     | 
[2025-10-13 01:40:09] 2025-10-12 23:39:36,802 | INFO     | job summary report
[2025-10-13 01:40:09] 2025-10-12 23:39:36,802 | INFO     | --------------------------------------------------
[2025-10-13 01:40:09] 2025-10-12 23:39:36,802 | INFO     | PanDA job id: 6839866275
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | task id: 46676269
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | errors: (none)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | pilot state: finished 
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | transexitcode: 0
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | exeerrorcode: 0
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | exeerrordiag: 
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | exitcode: 0
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | exitmsg: OK
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | cpuconsumptiontime: 14539 s
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | nevents: 400
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | neventsw: 0
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | pid: 3237911
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | pgrp: 3237911
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | corecount: 3
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | event service: False
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | sizes: {0: 2348689, 1: 2348888, 3: 2349150, 11: 2349178, 5066: 2375672, 5067: 2375671, 5068: 2384915, 5076: 2385053}
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | --------------------------------------------------
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | 
[2025-10-13 01:40:09] 2025-10-12 23:39:36,803 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | job 6839866275 has completed (purged errors)
[2025-10-13 01:40:09] 2025-10-12 23:39:36,816 | INFO     | overall cleanup function is called
[2025-10-13 01:40:09] 2025-10-12 23:39:37,823 | INFO     | --- collectZombieJob: --- 10, [3237911]
[2025-10-13 01:40:09] 2025-10-12 23:39:37,823 | INFO     | zombie collector waiting for pid 3237911
[2025-10-13 01:40:09] 2025-10-12 23:39:37,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:40:09] 2025-10-12 23:39:37,823 | INFO     | collected zombie processes
[2025-10-13 01:40:09] 2025-10-12 23:39:37,823 | INFO     | will attempt to kill all subprocesses of pid=3237911
[2025-10-13 01:40:09] 2025-10-12 23:39:37,866 | INFO     | process IDs to be killed: [3237911] (in reverse order)
[2025-10-13 01:40:09] 2025-10-12 23:39:37,890 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:40:09] 2025-10-12 23:39:37,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:40:09] 2025-10-12 23:39:37,892 | INFO     | did not find any defunct processes belonging to 3237911
[2025-10-13 01:40:09] 2025-10-12 23:39:37,893 | INFO     | did not find any defunct processes belonging to 3237911
[2025-10-13 01:40:09] 2025-10-12 23:39:37,893 | INFO     | ready for new job
[2025-10-13 01:40:09] 2025-10-12 23:39:37,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:40:09] 2025-10-12 23:39:37,894 | INFO     | ***************************************
[2025-10-13 01:40:09] 2025-10-12 23:39:37,894 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:40:09] 2025-10-12 23:39:37,894 | INFO     | ***************************************
[2025-10-13 01:40:09] 2025-10-12 23:39:37,894 | INFO     | 
[2025-10-13 01:40:09] 2025-10-12 23:39:37,894 | INFO     | architecture information:
[2025-10-13 01:40:09] 2025-10-12 23:39:37,894 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:40:09] 2025-10-12 23:39:37,903 | INFO     | cat /etc/os-release:
[2025-10-13 01:40:09] NAME="CentOS Linux"
[2025-10-13 01:40:09] VERSION="7 (Core)"
[2025-10-13 01:40:09] ID="centos"
[2025-10-13 01:40:09] ID_LIKE="rhel fedora"
[2025-10-13 01:40:09] VERSION_ID="7"
[2025-10-13 01:40:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:40:09] ANSI_COLOR="0;31"
[2025-10-13 01:40:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:40:09] HOME_URL="https://www.centos.org/"
[2025-10-13 01:40:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:40:09] 
[2025-10-13 01:40:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:40:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:40:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:40:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:40:09] 
[2025-10-13 01:40:09] 2025-10-12 23:39:37,904 | INFO     | ***************************************
[2025-10-13 01:40:09] 2025-10-12 23:39:38,407 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 01:40:09] 2025-10-12 23:39:38,420 | INFO     | sufficient remaining disk space (376914837504 B)
[2025-10-13 01:40:09] 2025-10-12 23:39:38,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:40:09] 2025-10-12 23:39:38,420 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:40:09] 2025-10-12 23:39:38,420 | INFO     | update_server=False
[2025-10-13 01:40:09] 2025-10-12 23:39:38,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:40:09] 2025-10-12 23:39:38,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:40:09] 2025-10-12 23:39:38,421 | INFO     | aborting loop
[2025-10-13 01:40:09] 2025-10-12 23:39:38,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:40:09] 2025-10-12 23:39:39,217 | INFO     | all payload control threads have been joined
[2025-10-13 01:40:09] 2025-10-12 23:39:39,263 | INFO     | all data control threads have been joined
[2025-10-13 01:40:09] 2025-10-12 23:39:39,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:40:09] 2025-10-12 23:39:39,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:40:09] 2025-10-12 23:39:39,426 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:39,426 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:39,426 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:39,680 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:39,848 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,059 | INFO     | all job control threads have been joined
[2025-10-13 01:40:09] 2025-10-12 23:39:40,223 | INFO     | [payload] control thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,233 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,269 | INFO     | [data] control thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,468 | INFO     | [job] validate thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,593 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:40,740 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:41,065 | INFO     | [job] control thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:41,394 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:43,416 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:40:09] 2025-10-12 23:39:52,938 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:40:09] 2025-10-12 23:39:54,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312836228928)>', '<ExcThread(monitor, started 140312311736064)>']
[2025-10-13 01:40:09] 2025-10-12 23:39:59,715 | INFO     | all workflow threads have been joined
[2025-10-13 01:40:09] 2025-10-12 23:39:59,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:40:09] 2025-10-12 23:39:59,716 | INFO     | traces error code: 0
[2025-10-13 01:40:09] 2025-10-12 23:39:59,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:40:09] 2025-10-12 23:40:09,474 | INFO     | PID=3231473 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:40:09] 2025-10-12 23:40:09,474 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:40:09] 2025-10-12 23:40:09,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:40:09] 2025-10-12 23:40:09,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:40:09] 2025-10-12 23:40:09,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:40:09] 2025-10-12 23:40:09,474 | INFO     | [monitor] control thread has ended
[2025-10-13 01:40:09] 2025-10-12 23:40:09,521 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:40:09] 2025-10-12 23:40:09,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:40:09] 2025-10-12 23:40:09,526 [wrapper] pilotpid: 3231473
[2025-10-13 01:40:09] 2025-10-12 23:40:09,528 [wrapper] Pilot exit status: 0
[2025-10-13 01:40:09] 2025-10-12 23:40:09,536 [wrapper] pandaids: 6839866275
[2025-10-13 01:40:09] 2025-10-12 23:40:09,554 [wrapper] cleanup supervisor_pilot 3250088 3231474
[2025-10-13 01:40:09] 2025-10-12 23:40:09,556 [wrapper] Test setup, not cleaning
[2025-10-13 01:40:09] 2025-10-12 23:40:09,559 [wrapper] apfmon messages muted
[2025-10-13 01:40:09] 2025-10-12 23:40:09,561 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:40:09] 2025-10-12 23:40:09,564 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:40:09]  *** Error codes and diagnostics ***
[2025-10-13 01:40:09]     "exeErrorCode": 0,
[2025-10-13 01:40:09]     "exeErrorDiag": "",
[2025-10-13 01:40:09]     "pilotErrorCode": 0,
[2025-10-13 01:40:09]     "pilotErrorDiag": "",
[2025-10-13 01:40:09]  *** Listing of results directory ***
[2025-10-13 01:40:09] total 414060
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:16 pilot3.tar.gz
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:18 queuedata.json
[2025-10-13 01:40:09] -rwx------ 1 boinc boinc     36292 Oct 12 12:19 runpilot2-wrapper.sh
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:40:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:14 run_atlas
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:14 job.xml
[2025-10-13 01:40:09] -rw-r--r-- 2 boinc boinc 219907019 Oct 13 00:14 EVNT.46676267._003619.pool.root.1
[2025-10-13 01:40:09] -rw-r--r-- 2 boinc boinc    569684 Oct 13 00:14 input.tar.gz
[2025-10-13 01:40:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:14 start_atlas.sh
[2025-10-13 01:40:09] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:14 shared
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:14 boinc_setup_complete
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc      6450 Oct 13 00:14 init_data.xml
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:14 boinc_lockfile
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:14 pandaJob.out
[2025-10-13 01:40:09] -rw------- 1 boinc boinc    975603 Oct 13 00:14 agis_schedconf.cvmfs.json
[2025-10-13 01:40:09] -rw------- 1 boinc boinc   1560580 Oct 13 00:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:40:09] drwx------ 5 boinc boinc      4096 Oct 13 00:14 pilot3
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:39 boinc_task_state.xml
[2025-10-13 01:40:09] -rw------- 1 boinc boinc 198198145 Oct 13 01:39 HITS.46676269._075993.pool.root.1
[2025-10-13 01:40:09] -rw------- 1 boinc boinc        95 Oct 13 01:39 pilot_heartbeat.json
[2025-10-13 01:40:09] -rw------- 1 boinc boinc      1017 Oct 13 01:39 memory_monitor_summary.json
[2025-10-13 01:40:09] -rw------- 1 boinc boinc    245550 Oct 13 01:39 log.46676269._075993.job.log.tgz.1
[2025-10-13 01:40:09] -rw------- 1 boinc boinc      7759 Oct 13 01:39 heartbeat.json
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:40 wrapper_checkpoint.txt
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:40 boinc_mmap_file
[2025-10-13 01:40:09] -rw------- 1 boinc boinc       747 Oct 13 01:40 pilotlog.txt
[2025-10-13 01:40:09] -rw------- 1 boinc boinc    746289 Oct 13 01:40 log.46676269._075993.job.log.1
[2025-10-13 01:40:09] -rw------- 1 boinc boinc       357 Oct 13 01:40 output.list
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:40 runtime_log
[2025-10-13 01:40:09] -rw------- 1 boinc boinc   1013760 Oct 13 01:40 result.tar.gz
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc      8802 Oct 13 01:40 runtime_log.err
[2025-10-13 01:40:09] -rw------- 1 boinc boinc       663 Oct 13 01:40 r3uKDmAM8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyRjNDmIAVjLm.diag
[2025-10-13 01:40:09] -rw-r--r-- 1 boinc boinc     22154 Oct 13 01:40 stderr.txt
[2025-10-13 01:40:09] HITS file was successfully produced:
[2025-10-13 01:40:09] -rw------- 1 boinc boinc 198198145 Oct 13 01:39 shared/HITS.pool.root.1
[2025-10-13 01:40:09]  *** Contents of shared directory: ***
[2025-10-13 01:40:09] total 409888
[2025-10-13 01:40:09] -rw-r--r-- 2 boinc boinc 219907019 Oct 13 00:14 ATLAS.root_0
[2025-10-13 01:40:09] -rw-r--r-- 2 boinc boinc    569684 Oct 13 00:14 input.tar.gz
[2025-10-13 01:40:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:14 start_atlas.sh
[2025-10-13 01:40:09] -rw------- 1 boinc boinc 198198145 Oct 13 01:39 HITS.pool.root.1
[2025-10-13 01:40:09] -rw------- 1 boinc boinc   1013760 Oct 13 01:40 result.tar.gz
01:40:11 (3227748): run_atlas exited; CPU time 14557.824189
01:40:11 (3227748): called boinc_finish(0)

</stderr_txt>
]]>

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