Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:45:56 (497103): wrapper (7.7.26015): starting
08:45:56 (497103): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:45:56] Arguments: --nthreads 8
[2025-10-12 08:45:56] Threads: 8
[2025-10-12 08:45:56] Checking for CVMFS
[2025-10-12 08:45:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:45:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:45:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:45:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:45:57] 2.13.2.0 5081 5697 138860 151620 1 325 32616671 40960000 27414 16776704 0 20062716 99.720 13992987 34945 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:45:57] CVMFS is ok
[2025-10-12 08:45:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:45:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:45:57] Further information can be found at the LHC@home message board.
[2025-10-12 08:45:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:45:57] Checking for apptainer binary...
[2025-10-12 08:45:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:45:57] Running /usr/bin/apptainer --version
[2025-10-12 08:45:57] apptainer version 1.4.3-1.el9
[2025-10-12 08:45:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:45:57] c-212-6.aglt2.org
[2025-10-12 08:45:57] apptainer works
[2025-10-12 08:45:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:45:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:45:57] Starting ATLAS job with PandaID=6839164678
[2025-10-12 08:45:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:00:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:00:34] 2025-10-12 14:59:51,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:00:34] 2025-10-12 14:59:51,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:00:34] 2025-10-12 14:59:51,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:00:34] 2025-10-12 14:59:51,305 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:00:34] 2025-10-12 14:59:51,328 | INFO     | sum of square deviations: 697116319.1297699
[2025-10-12 11:00:34] 2025-10-12 14:59:51,328 | INFO     | sum of deviations: 15445536848.656488
[2025-10-12 11:00:34] 2025-10-12 14:59:51,329 | INFO     | mean x: 1760277196.2290077
[2025-10-12 11:00:34] 2025-10-12 14:59:51,329 | INFO     | mean y: 2444950.5114503815
[2025-10-12 11:00:34] 2025-10-12 14:59:51,329 | INFO     | -- intersect: -38998831525.335434
[2025-10-12 11:00:34] 2025-10-12 14:59:51,329 | INFO     | intersect: -38998831525.335434
[2025-10-12 11:00:34] 2025-10-12 14:59:51,329 | INFO     | chi2: 2.963135563643141
[2025-10-12 11:00:34] 2025-10-12 14:59:51,331 | INFO     | sum of square deviations: 620314726.3571442
[2025-10-12 11:00:34] 2025-10-12 14:59:51,335 | INFO     | sum of deviations: 23496204676.23807
[2025-10-12 11:00:34] 2025-10-12 14:59:51,335 | INFO     | mean x: 1760277043.7380953
[2025-10-12 11:00:34] 2025-10-12 14:59:51,335 | INFO     | mean y: 2460395.492063492
[2025-10-12 11:00:34] 2025-10-12 14:59:51,335 | INFO     | -- intersect: -66673096300.450005
[2025-10-12 11:00:34] 2025-10-12 14:59:51,335 | INFO     | intersect: -66673096300.450005
[2025-10-12 11:00:34] 2025-10-12 14:59:51,341 | INFO     | chi2: 2.1722101917186434
[2025-10-12 11:00:34] 2025-10-12 14:59:51,341 | INFO     | current chi2=2.1722101917186434 (change=26.69217641031799 %)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,341 | INFO     | sum of square deviations: 549343084.4132229
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | sum of deviations: 22594028940.38844
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | mean x: 1760276891.214876
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | mean y: 2458455.5619834713
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | -- intersect: -72396281333.23106
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | intersect: -72396281333.23106
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | chi2: 2.1750220295250586
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | current chi2=2.1750220295250586 (change=-0.12944593562515871 %)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | right removable region: 120
[2025-10-12 11:00:34] 2025-10-12 14:59:51,342 | INFO     | sum of square deviations: 620296426.3571442
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | sum of deviations: -8207318673.904762
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | mean x: 1760277348.7380953
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | mean y: 2491257.396825397
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | -- intersect: 23293222175.184803
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | intersect: 23293222175.184803
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | chi2: 1.164683220990381
[2025-10-12 11:00:34] 2025-10-12 14:59:51,343 | INFO     | current chi2=1.164683220990381 (change=60.69423095990868 %)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,344 | INFO     | sum of square deviations: 549344794.0495882
[2025-10-12 11:00:34] 2025-10-12 14:59:51,344 | INFO     | sum of deviations: -14464066109.842976
[2025-10-12 11:00:34] 2025-10-12 14:59:51,349 | INFO     | mean x: 1760277501.2396693
[2025-10-12 11:00:34] 2025-10-12 14:59:51,349 | INFO     | mean y: 2504653.9256198346
[2025-10-12 11:00:34] 2025-10-12 14:59:51,349 | INFO     | -- intersect: 46350027057.68119
[2025-10-12 11:00:34] 2025-10-12 14:59:51,349 | INFO     | intersect: 46350027057.68119
[2025-10-12 11:00:34] 2025-10-12 14:59:51,349 | INFO     | chi2: 1.046440246036688
[2025-10-12 11:00:34] 2025-10-12 14:59:51,349 | INFO     | current chi2=1.046440246036688 (change=10.152372149153647 %)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,350 | INFO     | left removable region: 20
[2025-10-12 11:00:34] 2025-10-12 14:59:51,350 | INFO     | sum of square deviations: 310086014.16
[2025-10-12 11:00:34] 2025-10-12 14:59:51,350 | INFO     | sum of deviations: -7337791223.080002
[2025-10-12 11:00:34] 2025-10-12 14:59:51,350 | INFO     | mean x: 1760277470.72
[2025-10-12 11:00:34] 2025-10-12 14:59:51,350 | INFO     | mean y: 2529315.39
[2025-10-12 11:00:34] 2025-10-12 14:59:51,350 | INFO     | -- intersect: 41657257310.21637
[2025-10-12 11:00:34] 2025-10-12 14:59:51,351 | INFO     | intersect: 41657257310.21637
[2025-10-12 11:00:34] 2025-10-12 14:59:51,351 | INFO     | chi2: 0.14127333666227143
[2025-10-12 11:00:34] 2025-10-12 14:59:51,351 | INFO     | -- intersect: 41657257310.21637
[2025-10-12 11:00:34] 2025-10-12 14:59:51,351 | INFO     | current memory leak: -23.66 B/s (using 100 data points, chi2=0.14)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | could have reported an average CPU frequency of 2942 MHz (8 samples)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | ..............................
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . Timing measurements:
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . get job = 0 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . initial setup = 3 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . payload setup = 19 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . stage-in = 0 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . payload execution = 7950 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . stage-out = 1 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | . log creation = 0 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,352 | INFO     | ..............................
[2025-10-12 11:00:34] 2025-10-12 14:59:51,634 | INFO     | 
[2025-10-12 11:00:34] 2025-10-12 14:59:51,634 | INFO     | job summary report
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | --------------------------------------------------
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | PanDA job id: 6839164678
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | task id: 46676269
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | errors: (none)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | pilot state: finished 
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | transexitcode: 0
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | exeerrorcode: 0
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | exeerrordiag: 
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | exitcode: 0
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | exitmsg: OK
[2025-10-12 11:00:34] 2025-10-12 14:59:51,635 | INFO     | cpuconsumptiontime: 35381 s
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | nevents: 400
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | neventsw: 0
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | pid: 508809
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | pgrp: 508809
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | corecount: 8
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | event service: False
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | sizes: {0: 2348806, 1: 2348806, 8: 2349096, 12: 2349124, 7973: 2376783, 7974: 2376782, 7976: 2385964, 7978: 2386020, 7989: 2386214}
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | --------------------------------------------------
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | 
[2025-10-12 11:00:34] 2025-10-12 14:59:51,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 11:00:34] 2025-10-12 14:59:51,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:00:34] 2025-10-12 14:59:51,665 | INFO     | job 6839164678 has completed (purged errors)
[2025-10-12 11:00:34] 2025-10-12 14:59:51,665 | INFO     | overall cleanup function is called
[2025-10-12 11:00:34] 2025-10-12 14:59:52,674 | INFO     | --- collectZombieJob: --- 10, [508809]
[2025-10-12 11:00:34] 2025-10-12 14:59:52,675 | INFO     | zombie collector waiting for pid 508809
[2025-10-12 11:00:34] 2025-10-12 14:59:52,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:00:34] 2025-10-12 14:59:52,675 | INFO     | collected zombie processes
[2025-10-12 11:00:34] 2025-10-12 14:59:52,675 | INFO     | will attempt to kill all subprocesses of pid=508809
[2025-10-12 11:00:34] 2025-10-12 14:59:53,555 | INFO     | process IDs to be killed: [508809] (in reverse order)
[2025-10-12 11:00:34] 2025-10-12 14:59:53,728 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:00:34] 2025-10-12 14:59:53,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:00:34] 2025-10-12 14:59:53,864 | INFO     | did not find any defunct processes belonging to 508809
[2025-10-12 11:00:34] 2025-10-12 14:59:53,999 | INFO     | did not find any defunct processes belonging to 508809
[2025-10-12 11:00:34] 2025-10-12 14:59:53,999 | INFO     | ready for new job
[2025-10-12 11:00:34] 2025-10-12 14:59:53,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:00:34] 2025-10-12 14:59:54,001 | INFO     | ***************************************
[2025-10-12 11:00:34] 2025-10-12 14:59:54,002 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:00:34] 2025-10-12 14:59:54,002 | INFO     | ***************************************
[2025-10-12 11:00:34] 2025-10-12 14:59:54,002 | INFO     | 
[2025-10-12 11:00:34] 2025-10-12 14:59:54,007 | INFO     | architecture information:
[2025-10-12 11:00:34] 2025-10-12 14:59:54,008 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:00:34] 2025-10-12 14:59:54,097 | INFO     | cat /etc/os-release:
[2025-10-12 11:00:34] NAME="CentOS Linux"
[2025-10-12 11:00:34] VERSION="7 (Core)"
[2025-10-12 11:00:34] ID="centos"
[2025-10-12 11:00:34] ID_LIKE="rhel fedora"
[2025-10-12 11:00:34] VERSION_ID="7"
[2025-10-12 11:00:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:00:34] ANSI_COLOR="0;31"
[2025-10-12 11:00:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:00:34] HOME_URL="https://www.centos.org/"
[2025-10-12 11:00:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:00:34] 
[2025-10-12 11:00:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:00:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:00:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:00:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:00:34] 
[2025-10-12 11:00:34] 2025-10-12 14:59:54,098 | INFO     | ***************************************
[2025-10-12 11:00:34] 2025-10-12 14:59:54,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 11:00:34] 2025-10-12 14:59:54,649 | INFO     | sufficient remaining disk space (127525715968 B)
[2025-10-12 11:00:34] 2025-10-12 14:59:54,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:00:34] 2025-10-12 14:59:54,649 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:00:34] 2025-10-12 14:59:54,650 | INFO     | update_server=False
[2025-10-12 11:00:34] 2025-10-12 14:59:54,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:00:34] 2025-10-12 14:59:54,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:00:34] 2025-10-12 14:59:54,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:00:34] 2025-10-12 14:59:54,660 | INFO     | aborting loop
[2025-10-12 11:00:34] 2025-10-12 14:59:55,205 | INFO     | all job control threads have been joined
[2025-10-12 11:00:34] 2025-10-12 14:59:55,656 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:55,665 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:55,671 | INFO     | all data control threads have been joined
[2025-10-12 11:00:34] 2025-10-12 14:59:55,714 | INFO     | all payload control threads have been joined
[2025-10-12 11:00:34] 2025-10-12 14:59:55,822 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:55,862 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:55,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,211 | INFO     | [job] control thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:00:34] 2025-10-12 14:59:56,585 | INFO     | [job] validate thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,608 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:00:34] 2025-10-12 14:59:56,666 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,677 | INFO     | [data] control thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,706 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:56,720 | INFO     | [payload] control thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:57,139 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:57,163 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:00:34] 2025-10-12 14:59:57,654 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:00:34] 2025-10-12 15:00:00,370 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:00:34] 2025-10-12 15:00:24,144 | INFO     | PID=500878 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 11:00:34] 2025-10-12 15:00:24,144 | INFO     | .. there are 29 such processes running
[2025-10-12 11:00:34] 2025-10-12 15:00:24,145 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:00:34] 2025-10-12 15:00:24,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:00:34] 2025-10-12 15:00:24,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:00:34] 2025-10-12 15:00:28,605 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:00:34] 2025-10-12 15:00:28,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123697514304)>', '<ExcThread(monitor, started 140123207350016)>']
[2025-10-12 11:00:34] 2025-10-12 15:00:29,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:00:34] 2025-10-12 15:00:29,176 | INFO     | [monitor] control thread has ended
[2025-10-12 11:00:34] 2025-10-12 15:00:34,017 | INFO     | all workflow threads have been joined
[2025-10-12 11:00:34] 2025-10-12 15:00:34,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:00:34] 2025-10-12 15:00:34,018 | INFO     | traces error code: 0
[2025-10-12 11:00:34] 2025-10-12 15:00:34,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:00:34] 2025-10-12 15:00:34,207 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:00:34] 2025-10-12 15:00:34,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:00:34] 2025-10-12 15:00:34,247 [wrapper] pilotpid: 500878
[2025-10-12 11:00:34] 2025-10-12 15:00:34,253 [wrapper] Pilot exit status: 0
[2025-10-12 11:00:34] 2025-10-12 15:00:34,277 [wrapper] pandaids: 6839164678
[2025-10-12 11:00:34] 2025-10-12 15:00:34,404 [wrapper] cleanup supervisor_pilot  866147 500879
[2025-10-12 11:00:34] 2025-10-12 15:00:34,408 [wrapper] Test setup, not cleaning
[2025-10-12 11:00:34] 2025-10-12 15:00:34,411 [wrapper] apfmon messages muted
[2025-10-12 11:00:34] 2025-10-12 15:00:34,414 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:00:34] 2025-10-12 15:00:34,420 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:00:34]  *** Error codes and diagnostics ***
[2025-10-12 11:00:34]     "exeErrorCode": 0,
[2025-10-12 11:00:34]     "exeErrorDiag": "",
[2025-10-12 11:00:34]     "pilotErrorCode": 0,
[2025-10-12 11:00:34]     "pilotErrorDiag": "",
[2025-10-12 11:00:34]  *** Listing of results directory ***
[2025-10-12 11:00:34] total 411960
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:02 pilot3.tar.gz
[2025-10-12 11:00:34] -rwx------. 1 boincer umatlas     36292 Oct 11 21:12 runpilot2-wrapper.sh
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:12 queuedata.json
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:00:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:45 run_atlas
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:45 job.xml
[2025-10-12 11:00:34] -rw-r--r--. 2 boincer umatlas 223834772 Oct 12 08:45 EVNT.46676267._003120.pool.root.1
[2025-10-12 11:00:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:45 start_atlas.sh
[2025-10-12 11:00:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:45 shared
[2025-10-12 11:00:34] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 08:45 input.tar.gz
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:45 boinc_lockfile
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 08:45 pandaJob.out
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas    975512 Oct 12 08:46 agis_schedconf.cvmfs.json
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:00:34] drwx------. 5 boincer umatlas      4096 Oct 12 08:46 pilot3
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 10:57 init_data.xml
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas 191214922 Oct 12 10:58 HITS.46676269._068169.pool.root.1
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas       530 Oct 12 10:58 boinc_task_state.xml
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas      1035 Oct 12 10:59 memory_monitor_summary.json
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas    383500 Oct 12 10:59 log.46676269._068169.job.log.tgz.1
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas      7775 Oct 12 10:59 heartbeat.json
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas        95 Oct 12 11:00 pilot_heartbeat.json
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas        27 Oct 12 11:00 wrapper_checkpoint.txt
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:00 boinc_mmap_file
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas      4824 Oct 12 11:00 pilotlog.txt
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas   1057041 Oct 12 11:00 log.46676269._068169.job.log.1
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas       357 Oct 12 11:00 output.list
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:00 runtime_log
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas   1464320 Oct 12 11:00 result.tar.gz
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas       652 Oct 12 11:00 SlqKDmCozR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJuSMDmrVuLOo.diag
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 11:00 runtime_log.err
[2025-10-12 11:00:34] -rw-r--r--. 1 boincer umatlas     20961 Oct 12 11:00 stderr.txt
[2025-10-12 11:00:34] HITS file was successfully produced:
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas 191214922 Oct 12 10:58 shared/HITS.pool.root.1
[2025-10-12 11:00:34]  *** Contents of shared directory: ***
[2025-10-12 11:00:34] total 407344
[2025-10-12 11:00:34] -rw-r--r--. 2 boincer umatlas 223834772 Oct 12 08:45 ATLAS.root_0
[2025-10-12 11:00:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:45 start_atlas.sh
[2025-10-12 11:00:34] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 08:45 input.tar.gz
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas 191214922 Oct 12 10:58 HITS.pool.root.1
[2025-10-12 11:00:34] -rw-------. 1 boincer umatlas   1464320 Oct 12 11:00 result.tar.gz
11:00:36 (497103): run_atlas exited; CPU time 35634.505179
11:00:36 (497103): called boinc_finish(0)

</stderr_txt>
]]>

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