Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:09:46 (23211): wrapper (7.7.26015): starting
08:09:46 (23211): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:09:46] Arguments: --nthreads 8
[2025-10-12 08:09:46] Threads: 8
[2025-10-12 08:09:46] Checking for CVMFS
[2025-10-12 08:09:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:09:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:09:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:09:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:09:47] 2.11.2.0 17609 52848 125300 151619 0 188 14736026 18432001 1833 130560 0 47359474 99.975 2267434 31981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:09:47] CVMFS is ok
[2025-10-12 08:09:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:09:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:09:47] Further information can be found at the LHC@home message board.
[2025-10-12 08:09:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:09:47] Checking for apptainer binary...
[2025-10-12 08:09:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:09:47] Running /usr/bin/apptainer --version
[2025-10-12 08:09:47] apptainer version 1.3.2-1.el7
[2025-10-12 08:09:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:09:48] c-206-32.aglt2.org
[2025-10-12 08:09:48] apptainer works
[2025-10-12 08:09:48] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:09:48] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:09:48] Starting ATLAS job with PandaID=6839386358
[2025-10-12 08:09:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:19:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:19:36] 2025-10-12 15:19:02,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:19:36] 2025-10-12 15:19:02,993 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:19:36] 2025-10-12 15:19:02,994 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 11:19:36] 2025-10-12 15:19:02,995 | INFO     | sum of deviations: 17117861113.999998
[2025-10-12 11:19:36] 2025-10-12 15:19:02,995 | INFO     | mean x: 1760276667.5
[2025-10-12 11:19:36] 2025-10-12 15:19:02,995 | INFO     | mean y: 2456102.0967741935
[2025-10-12 11:19:36] 2025-10-12 15:19:02,995 | INFO     | -- intersect: -15099240040.838871
[2025-10-12 11:19:36] 2025-10-12 15:19:02,995 | INFO     | intersect: -15099240040.838871
[2025-10-12 11:19:36] 2025-10-12 15:19:02,995 | INFO     | chi2: 2.2619509349529516
[2025-10-12 11:19:36] 2025-10-12 15:19:02,996 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | sum of deviations: 28739218225.000004
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | mean x: 1760276515.0
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | mean y: 2467157.552486188
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | -- intersect: -27511610136.717773
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | intersect: -27511610136.717773
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | chi2: 1.485941700577899
[2025-10-12 11:19:36] 2025-10-12 15:19:02,997 | INFO     | current chi2=1.485941700577899 (change=34.30707635535841 %)
[2025-10-12 11:19:36] 2025-10-12 15:19:02,998 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 11:19:36] 2025-10-12 15:19:02,998 | INFO     | sum of deviations: 27864123815.000004
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | mean x: 1760276362.5
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | mean y: 2466256.8863636362
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | -- intersect: -29012618370.752693
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | intersect: -29012618370.752693
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | chi2: 1.486772275742566
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | current chi2=1.486772275742566 (change=-0.05589554181998483 %)
[2025-10-12 11:19:36] 2025-10-12 15:19:02,999 | INFO     | right removable region: 175
[2025-10-12 11:19:36] 2025-10-12 15:19:03,000 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,000 | INFO     | sum of deviations: -12627145668.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,001 | INFO     | mean x: 1760276820.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,001 | INFO     | mean y: 2484769.7513812156
[2025-10-12 11:19:36] 2025-10-12 15:19:03,001 | INFO     | -- intersect: 12091342559.582561
[2025-10-12 11:19:36] 2025-10-12 15:19:03,001 | INFO     | intersect: 12091342559.582561
[2025-10-12 11:19:36] 2025-10-12 15:19:03,001 | INFO     | chi2: 0.8280623574304944
[2025-10-12 11:19:36] 2025-10-12 15:19:03,001 | INFO     | current chi2=0.8280623574304944 (change=63.39167465417555 %)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,002 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,002 | INFO     | sum of deviations: -15413463347.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,002 | INFO     | mean x: 1760276972.5
[2025-10-12 11:19:36] 2025-10-12 15:19:03,003 | INFO     | mean y: 2487590.352272727
[2025-10-12 11:19:36] 2025-10-12 15:19:03,003 | INFO     | -- intersect: 16052627956.026957
[2025-10-12 11:19:36] 2025-10-12 15:19:03,003 | INFO     | intersect: 16052627956.026957
[2025-10-12 11:19:36] 2025-10-12 15:19:03,003 | INFO     | chi2: 0.8015479343483528
[2025-10-12 11:19:36] 2025-10-12 15:19:03,003 | INFO     | current chi2=0.8015479343483528 (change=3.2019838656133017 %)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,003 | INFO     | left removable region: 20
[2025-10-12 11:19:36] 2025-10-12 15:19:03,004 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,004 | INFO     | sum of deviations: -3558717918.0000005
[2025-10-12 11:19:36] 2025-10-12 15:19:03,004 | INFO     | mean x: 1760276942.0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,004 | INFO     | mean y: 2500298.5161290322
[2025-10-12 11:19:36] 2025-10-12 15:19:03,005 | INFO     | -- intersect: 5427742405.749299
[2025-10-12 11:19:36] 2025-10-12 15:19:03,005 | INFO     | intersect: 5427742405.749299
[2025-10-12 11:19:36] 2025-10-12 15:19:03,005 | INFO     | chi2: 0.0035103224941225694
[2025-10-12 11:19:36] 2025-10-12 15:19:03,005 | INFO     | -- intersect: 5427742405.749299
[2025-10-12 11:19:36] 2025-10-12 15:19:03,005 | INFO     | current memory leak: -3.08 B/s (using 155 data points, chi2=0.00)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,005 | INFO     | could have reported an average CPU frequency of 2561 MHz (10 samples)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | ..............................
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . Timing measurements:
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . get job = 0 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . initial setup = 2 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . payload setup = 4 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . stage-in = 0 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . payload execution = 11309 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . stage-out = 2 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,006 | INFO     | . log creation = 0 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,007 | INFO     | ..............................
[2025-10-12 11:19:36] 2025-10-12 15:19:03,104 | INFO     | 
[2025-10-12 11:19:36] 2025-10-12 15:19:03,105 | INFO     | job summary report
[2025-10-12 11:19:36] 2025-10-12 15:19:03,105 | INFO     | --------------------------------------------------
[2025-10-12 11:19:36] 2025-10-12 15:19:03,105 | INFO     | PanDA job id: 6839386358
[2025-10-12 11:19:36] 2025-10-12 15:19:03,105 | INFO     | task id: 46676269
[2025-10-12 11:19:36] 2025-10-12 15:19:03,106 | INFO     | errors: (none)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:19:36] 2025-10-12 15:19:03,106 | INFO     | pilot state: finished 
[2025-10-12 11:19:36] 2025-10-12 15:19:03,106 | INFO     | transexitcode: 0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,106 | INFO     | exeerrorcode: 0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,106 | INFO     | exeerrordiag: 
[2025-10-12 11:19:36] 2025-10-12 15:19:03,107 | INFO     | exitcode: 0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,107 | INFO     | exitmsg: OK
[2025-10-12 11:19:36] 2025-10-12 15:19:03,107 | INFO     | cpuconsumptiontime: 86201 s
[2025-10-12 11:19:36] 2025-10-12 15:19:03,107 | INFO     | nevents: 400
[2025-10-12 11:19:36] 2025-10-12 15:19:03,107 | INFO     | neventsw: 0
[2025-10-12 11:19:36] 2025-10-12 15:19:03,107 | INFO     | pid: 1869
[2025-10-12 11:19:36] 2025-10-12 15:19:03,108 | INFO     | pgrp: 1869
[2025-10-12 11:19:36] 2025-10-12 15:19:03,108 | INFO     | corecount: 8
[2025-10-12 11:19:36] 2025-10-12 15:19:03,108 | INFO     | event service: False
[2025-10-12 11:19:36] 2025-10-12 15:19:03,108 | INFO     | sizes: {0: 2348806, 1: 2348806, 4: 2349096, 11: 2349124, 11317: 2378454, 11318: 2378453, 11322: 2387663, 11324: 2387719, 11328: 2387913}
[2025-10-12 11:19:36] 2025-10-12 15:19:03,108 | INFO     | --------------------------------------------------
[2025-10-12 11:19:36] 2025-10-12 15:19:03,108 | INFO     | 
[2025-10-12 11:19:36] 2025-10-12 15:19:03,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 11:19:36] 2025-10-12 15:19:03,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | job 6839386358 has completed (purged errors)
[2025-10-12 11:19:36] 2025-10-12 15:19:03,130 | INFO     | overall cleanup function is called
[2025-10-12 11:19:36] 2025-10-12 15:19:03,797 | INFO     | PID=26885 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 11:19:36] 2025-10-12 15:19:03,797 | INFO     | .. there are 3 such processes running
[2025-10-12 11:19:36] 2025-10-12 15:19:04,141 | INFO     | --- collectZombieJob: --- 10, [1869]
[2025-10-12 11:19:36] 2025-10-12 15:19:04,141 | INFO     | zombie collector waiting for pid 1869
[2025-10-12 11:19:36] 2025-10-12 15:19:04,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:19:36] 2025-10-12 15:19:04,141 | INFO     | collected zombie processes
[2025-10-12 11:19:36] 2025-10-12 15:19:04,141 | INFO     | will attempt to kill all subprocesses of pid=1869
[2025-10-12 11:19:36] 2025-10-12 15:19:04,269 | INFO     | process IDs to be killed: [1869] (in reverse order)
[2025-10-12 11:19:36] 2025-10-12 15:19:04,321 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:19:36] 2025-10-12 15:19:04,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:19:36] 2025-10-12 15:19:04,327 | INFO     | did not find any defunct processes belonging to 1869
[2025-10-12 11:19:36] 2025-10-12 15:19:04,331 | INFO     | did not find any defunct processes belonging to 1869
[2025-10-12 11:19:36] 2025-10-12 15:19:04,332 | INFO     | ready for new job
[2025-10-12 11:19:36] 2025-10-12 15:19:04,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:19:36] 2025-10-12 15:19:04,334 | INFO     | ***************************************
[2025-10-12 11:19:36] 2025-10-12 15:19:04,334 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:19:36] 2025-10-12 15:19:04,334 | INFO     | ***************************************
[2025-10-12 11:19:36] 2025-10-12 15:19:04,334 | INFO     | 
[2025-10-12 11:19:36] 2025-10-12 15:19:04,335 | INFO     | architecture information:
[2025-10-12 11:19:36] 2025-10-12 15:19:04,336 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:19:36] 2025-10-12 15:19:04,348 | INFO     | cat /etc/os-release:
[2025-10-12 11:19:36] NAME="CentOS Linux"
[2025-10-12 11:19:36] VERSION="7 (Core)"
[2025-10-12 11:19:36] ID="centos"
[2025-10-12 11:19:36] ID_LIKE="rhel fedora"
[2025-10-12 11:19:36] VERSION_ID="7"
[2025-10-12 11:19:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:19:36] ANSI_COLOR="0;31"
[2025-10-12 11:19:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:19:36] HOME_URL="https://www.centos.org/"
[2025-10-12 11:19:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:19:36] 
[2025-10-12 11:19:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:19:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:19:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:19:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:19:36] 
[2025-10-12 11:19:36] 2025-10-12 15:19:04,349 | INFO     | ***************************************
[2025-10-12 11:19:36] 2025-10-12 15:19:04,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 11:19:36] 2025-10-12 15:19:04,864 | INFO     | sufficient remaining disk space (28190965760 B)
[2025-10-12 11:19:36] 2025-10-12 15:19:04,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:19:36] 2025-10-12 15:19:04,865 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:19:36] 2025-10-12 15:19:04,865 | INFO     | update_server=False
[2025-10-12 11:19:36] 2025-10-12 15:19:04,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:19:36] 2025-10-12 15:19:04,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:19:36] 2025-10-12 15:19:04,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:19:36] 2025-10-12 15:19:04,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:19:36] 2025-10-12 15:19:04,866 | INFO     | aborting loop
[2025-10-12 11:19:36] 2025-10-12 15:19:05,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:19:36] 2025-10-12 15:19:05,230 | INFO     | all data control threads have been joined
[2025-10-12 11:19:36] 2025-10-12 15:19:05,830 | INFO     | all payload control threads have been joined
[2025-10-12 11:19:36] 2025-10-12 15:19:05,870 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:05,871 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:05,871 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,081 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,223 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,223 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,231 | INFO     | [data] control thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,425 | INFO     | all job control threads have been joined
[2025-10-12 11:19:36] 2025-10-12 15:19:06,662 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,761 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,835 | INFO     | [payload] control thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:06,867 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:07,281 | INFO     | [job] validate thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:07,431 | INFO     | [job] control thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:09,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:19:36] 2025-10-12 15:19:17,623 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:19:36] 2025-10-12 15:19:18,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787309066048)>', '<ExcThread(monitor, started 139786857723648)>']
[2025-10-12 11:19:36] 2025-10-12 15:19:23,787 | INFO     | all workflow threads have been joined
[2025-10-12 11:19:36] 2025-10-12 15:19:23,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:19:36] 2025-10-12 15:19:23,787 | INFO     | traces error code: 0
[2025-10-12 11:19:36] 2025-10-12 15:19:23,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:19:36] 2025-10-12 15:19:36,008 | INFO     | PID=26885 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:19:36] 2025-10-12 15:19:36,008 | INFO     | .. there are 3 such processes running
[2025-10-12 11:19:36] 2025-10-12 15:19:36,009 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:19:36] 2025-10-12 15:19:36,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:19:36] 2025-10-12 15:19:36,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:19:36] 2025-10-12 15:19:36,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:19:36] 2025-10-12 15:19:36,009 | INFO     | [monitor] control thread has ended
[2025-10-12 11:19:36] 2025-10-12 15:19:36,137 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:19:36] 2025-10-12 15:19:36,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:19:36] 2025-10-12 15:19:36,143 [wrapper] pilotpid: 26885
[2025-10-12 11:19:36] 2025-10-12 15:19:36,145 [wrapper] Pilot exit status: 0
[2025-10-12 11:19:36] 2025-10-12 15:19:36,155 [wrapper] pandaids: 6839386358
[2025-10-12 11:19:36] 2025-10-12 15:19:36,195 [wrapper] cleanup supervisor_pilot 27983 26886
[2025-10-12 11:19:36] 2025-10-12 15:19:36,199 [wrapper] Test setup, not cleaning
[2025-10-12 11:19:36] 2025-10-12 15:19:36,202 [wrapper] apfmon messages muted
[2025-10-12 11:19:36] 2025-10-12 15:19:36,204 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:19:36] 2025-10-12 15:19:36,207 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:19:36]  *** Error codes and diagnostics ***
[2025-10-12 11:19:36]     "exeErrorCode": 0,
[2025-10-12 11:19:36]     "exeErrorDiag": "",
[2025-10-12 11:19:36]     "pilotErrorCode": 0,
[2025-10-12 11:19:36]     "pilotErrorDiag": "",
[2025-10-12 11:19:36]  *** Listing of results directory ***
[2025-10-12 11:19:36] total 417796
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:06 queuedata.json
[2025-10-12 11:19:36] -rwx------ 1 boincer umatlas     36292 Oct 12 00:06 runpilot2-wrapper.sh
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:19:36] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:09 run_atlas
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:09 job.xml
[2025-10-12 11:19:36] -rw-r--r-- 2 boincer umatlas 219586248 Oct 12 08:09 EVNT.46676267._003250.pool.root.1
[2025-10-12 11:19:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:09 start_atlas.sh
[2025-10-12 11:19:36] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:09 shared
[2025-10-12 11:19:36] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 08:09 input.tar.gz
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:09 boinc_lockfile
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 08:09 pandaJob.out
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas    975520 Oct 12 08:09 agis_schedconf.cvmfs.json
[2025-10-12 11:19:36] drwx------ 5 boincer umatlas      4096 Oct 12 08:09 pilot3
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas 200319694 Oct 12 11:18 HITS.46676269._070710.pool.root.1
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas       530 Oct 12 11:18 boinc_task_state.xml
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas      1054 Oct 12 11:18 memory_monitor_summary.json
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas        95 Oct 12 11:18 pilot_heartbeat.json
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas   1560580 Oct 12 11:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas    416888 Oct 12 11:18 log.46676269._070710.job.log.tgz.1
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas      5950 Oct 12 11:18 init_data.xml
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas      7858 Oct 12 11:19 heartbeat.json
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas        28 Oct 12 11:19 wrapper_checkpoint.txt
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:19 boinc_mmap_file
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas       820 Oct 12 11:19 pilotlog.txt
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas   1591869 Oct 12 11:19 log.46676269._070710.job.log.1
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas       357 Oct 12 11:19 output.list
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:19 runtime_log
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas   2027520 Oct 12 11:19 result.tar.gz
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas       662 Oct 12 11:19 59FKDmPX2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcXiNDmeUjRXn.diag
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 11:19 runtime_log.err
[2025-10-12 11:19:36] -rw-r--r-- 1 boincer umatlas     21015 Oct 12 11:19 stderr.txt
[2025-10-12 11:19:36] HITS file was successfully produced:
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas 200319694 Oct 12 11:18 shared/HITS.pool.root.1
[2025-10-12 11:19:36]  *** Contents of shared directory: ***
[2025-10-12 11:19:36] total 412632
[2025-10-12 11:19:36] -rw-r--r-- 2 boincer umatlas 219586248 Oct 12 08:09 ATLAS.root_0
[2025-10-12 11:19:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:09 start_atlas.sh
[2025-10-12 11:19:36] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 08:09 input.tar.gz
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas 200319694 Oct 12 11:18 HITS.pool.root.1
[2025-10-12 11:19:36] -rw------- 1 boincer umatlas   2027520 Oct 12 11:19 result.tar.gz
11:19:38 (23211): run_atlas exited; CPU time 86328.742268
11:19:38 (23211): called boinc_finish(0)

</stderr_txt>
]]>

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