Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:08:13 (19649): wrapper (7.7.26015): starting
14:08:13 (19649): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:08:13] Arguments: --nthreads 8
[2025-10-12 14:08:13] Threads: 8
[2025-10-12 14:08:13] Checking for CVMFS
[2025-10-12 14:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:08:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:08:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:08:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:08:18] 2.11.2.0 6116 220569 138928 151619 1 171 18621417 25165825 4632 130560 0 121153207 99.895 62268485 4051 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 14:08:18] CVMFS is ok
[2025-10-12 14:08:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:08:18] Checking for apptainer binary...
[2025-10-12 14:08:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:08:18] Running /usr/bin/apptainer --version
[2025-10-12 14:08:18] apptainer version 1.3.2-1.el7
[2025-10-12 14:08:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:08:25] cg-vwn314.simple-grid.lan
[2025-10-12 14:08:25] apptainer works
[2025-10-12 14:08:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:08:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:08:25] Starting ATLAS job with PandaID=6839866217
[2025-10-12 14:08:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:21:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:21:32] 2025-10-12 16:20:50,541 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:21:32] 2025-10-12 16:20:50,542 | INFO     | sum of square deviations: 4075741535.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,544 | INFO     | sum of deviations: 57181983861.50004
[2025-10-12 18:21:32] 2025-10-12 16:20:50,545 | INFO     | mean x: 1760278764.5
[2025-10-12 18:21:32] 2025-10-12 16:20:50,545 | INFO     | mean y: 2468471.4788135593
[2025-10-12 18:21:32] 2025-10-12 16:20:50,545 | INFO     | -- intersect: -24693953281.226913
[2025-10-12 18:21:32] 2025-10-12 16:20:50,545 | INFO     | intersect: -24693953281.226913
[2025-10-12 18:21:32] 2025-10-12 16:20:50,546 | INFO     | chi2: 7.5774760495108815
[2025-10-12 18:21:32] 2025-10-12 16:20:50,546 | INFO     | sum of square deviations: 3822136780.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,548 | INFO     | sum of deviations: 71578882056.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,548 | INFO     | mean x: 1760278612.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,549 | INFO     | mean y: 2476968.0086580086
[2025-10-12 18:21:32] 2025-10-12 16:20:50,549 | INFO     | -- intersect: -32963055770.996925
[2025-10-12 18:21:32] 2025-10-12 16:20:50,549 | INFO     | intersect: -32963055770.996925
[2025-10-12 18:21:32] 2025-10-12 16:20:50,549 | INFO     | chi2: 6.881073989195322
[2025-10-12 18:21:32] 2025-10-12 16:20:50,549 | INFO     | current chi2=6.881073989195322 (change=9.190422454195836 %)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,550 | INFO     | right removable region: 230
[2025-10-12 18:21:32] 2025-10-12 16:20:50,550 | INFO     | sum of square deviations: 3822136780.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,552 | INFO     | sum of deviations: -26432444421.000004
[2025-10-12 18:21:32] 2025-10-12 16:20:50,553 | INFO     | mean x: 1760278917.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,553 | INFO     | mean y: 2518720.7229437227
[2025-10-12 18:21:32] 2025-10-12 16:20:50,553 | INFO     | -- intersect: 12175938280.831041
[2025-10-12 18:21:32] 2025-10-12 16:20:50,553 | INFO     | intersect: 12175938280.831041
[2025-10-12 18:21:32] 2025-10-12 16:20:50,553 | INFO     | chi2: 2.557650144793808
[2025-10-12 18:21:32] 2025-10-12 16:20:50,554 | INFO     | current chi2=2.557650144793808 (change=66.2466746436117 %)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,554 | INFO     | sum of square deviations: 3579276412.5
[2025-10-12 18:21:32] 2025-10-12 16:20:50,556 | INFO     | sum of deviations: -68458901239.5
[2025-10-12 18:21:32] 2025-10-12 16:20:50,556 | INFO     | mean x: 1760279069.5
[2025-10-12 18:21:32] 2025-10-12 16:20:50,557 | INFO     | mean y: 2544952.5707964604
[2025-10-12 18:21:32] 2025-10-12 16:20:50,557 | INFO     | -- intersect: 33670459101.925266
[2025-10-12 18:21:32] 2025-10-12 16:20:50,557 | INFO     | intersect: 33670459101.925266
[2025-10-12 18:21:32] 2025-10-12 16:20:50,557 | INFO     | chi2: 1.0286799097482207
[2025-10-12 18:21:32] 2025-10-12 16:20:50,557 | INFO     | current chi2=1.0286799097482207 (change=59.780272847631764 %)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,558 | INFO     | sum of square deviations: 3346927870.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,559 | INFO     | sum of deviations: -68142914011.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,560 | INFO     | mean x: 1760279222.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,560 | INFO     | mean y: 2544703.9095022622
[2025-10-12 18:21:32] 2025-10-12 16:20:50,560 | INFO     | -- intersect: 35841547012.64345
[2025-10-12 18:21:32] 2025-10-12 16:20:50,560 | INFO     | intersect: 35841547012.64345
[2025-10-12 18:21:32] 2025-10-12 16:20:50,560 | INFO     | chi2: 1.0047463200444406
[2025-10-12 18:21:32] 2025-10-12 16:20:50,561 | INFO     | current chi2=1.0047463200444406 (change=2.326631392037003 %)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,561 | INFO     | left removable region: 30
[2025-10-12 18:21:32] 2025-10-12 16:20:50,561 | INFO     | sum of square deviations: 2480604650.0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,562 | INFO     | sum of deviations: -31794775538.500004
[2025-10-12 18:21:32] 2025-10-12 16:20:50,563 | INFO     | mean x: 1760279496.5
[2025-10-12 18:21:32] 2025-10-12 16:20:50,563 | INFO     | mean y: 2540443.635
[2025-10-12 18:21:32] 2025-10-12 16:20:50,563 | INFO     | -- intersect: 22564657093.799828
[2025-10-12 18:21:32] 2025-10-12 16:20:50,563 | INFO     | intersect: 22564657093.799828
[2025-10-12 18:21:32] 2025-10-12 16:20:50,563 | INFO     | chi2: 0.18504828576758584
[2025-10-12 18:21:32] 2025-10-12 16:20:50,563 | INFO     | -- intersect: 22564657093.799828
[2025-10-12 18:21:32] 2025-10-12 16:20:50,564 | INFO     | current memory leak: -12.82 B/s (using 200 data points, chi2=0.19)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,564 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,564 | INFO     | ..............................
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . Timing measurements:
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . get job = 0 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . initial setup = 6 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . payload setup = 124 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . stage-in = 0 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . payload execution = 14515 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . stage-out = 3 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | . log creation = 1 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,565 | INFO     | ..............................
[2025-10-12 18:21:32] 2025-10-12 16:20:50,846 | INFO     | 
[2025-10-12 18:21:32] 2025-10-12 16:20:50,846 | INFO     | job summary report
[2025-10-12 18:21:32] 2025-10-12 16:20:50,846 | INFO     | --------------------------------------------------
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | PanDA job id: 6839866217
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | task id: 46676269
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | errors: (none)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | pilot state: finished 
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | transexitcode: 0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | exeerrorcode: 0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | exeerrordiag: 
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | exitcode: 0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | exitmsg: OK
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | cpuconsumptiontime: 54524 s
[2025-10-12 18:21:32] 2025-10-12 16:20:50,847 | INFO     | nevents: 400
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | neventsw: 0
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | pid: 30304
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | pgrp: 30304
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | corecount: 8
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | event service: False
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 65: 2349181, 76: 2349209, 87: 2349265, 95: 2349555, 98: 2349863, 1
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | --------------------------------------------------
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | 
[2025-10-12 18:21:32] 2025-10-12 16:20:50,848 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 18:21:32] 2025-10-12 16:20:50,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:21:32] 2025-10-12 16:20:50,957 | INFO     | job 6839866217 has completed (purged errors)
[2025-10-12 18:21:32] 2025-10-12 16:20:50,957 | INFO     | overall cleanup function is called
[2025-10-12 18:21:32] 2025-10-12 16:20:51,275 | INFO     | PID=23741 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:21:32] 2025-10-12 16:20:51,275 | INFO     | .. there are 9 such processes running
[2025-10-12 18:21:32] 2025-10-12 16:20:51,964 | INFO     | --- collectZombieJob: --- 10, [30304]
[2025-10-12 18:21:32] 2025-10-12 16:20:51,964 | INFO     | zombie collector waiting for pid 30304
[2025-10-12 18:21:32] 2025-10-12 16:20:51,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:21:32] 2025-10-12 16:20:51,965 | INFO     | collected zombie processes
[2025-10-12 18:21:32] 2025-10-12 16:20:51,965 | INFO     | will attempt to kill all subprocesses of pid=30304
[2025-10-12 18:21:32] 2025-10-12 16:20:52,069 | INFO     | process IDs to be killed: [30304] (in reverse order)
[2025-10-12 18:21:32] 2025-10-12 16:20:52,674 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:21:32] 2025-10-12 16:20:52,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:21:32] 2025-10-12 16:20:52,678 | INFO     | did not find any defunct processes belonging to 30304
[2025-10-12 18:21:32] 2025-10-12 16:20:52,681 | INFO     | did not find any defunct processes belonging to 30304
[2025-10-12 18:21:32] 2025-10-12 16:20:52,682 | INFO     | ready for new job
[2025-10-12 18:21:32] 2025-10-12 16:20:52,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:21:32] 2025-10-12 16:20:52,684 | INFO     | ***************************************
[2025-10-12 18:21:32] 2025-10-12 16:20:52,684 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:21:32] 2025-10-12 16:20:52,684 | INFO     | ***************************************
[2025-10-12 18:21:32] 2025-10-12 16:20:52,684 | INFO     | 
[2025-10-12 18:21:32] 2025-10-12 16:20:52,685 | INFO     | pilot is running in a VM
[2025-10-12 18:21:32] 2025-10-12 16:20:52,685 | INFO     | architecture information:
[2025-10-12 18:21:32] 2025-10-12 16:20:52,698 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:21:32] 2025-10-12 16:20:52,969 | INFO     | cat /etc/os-release:
[2025-10-12 18:21:32] NAME="CentOS Linux"
[2025-10-12 18:21:32] VERSION="7 (Core)"
[2025-10-12 18:21:32] ID="centos"
[2025-10-12 18:21:32] ID_LIKE="rhel fedora"
[2025-10-12 18:21:32] VERSION_ID="7"
[2025-10-12 18:21:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:21:32] ANSI_COLOR="0;31"
[2025-10-12 18:21:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:21:32] HOME_URL="https://www.centos.org/"
[2025-10-12 18:21:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:21:32] 
[2025-10-12 18:21:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:21:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:21:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:21:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:21:32] 
[2025-10-12 18:21:32] 2025-10-12 16:20:52,969 | INFO     | ***************************************
[2025-10-12 18:21:32] 2025-10-12 16:20:53,473 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 18:21:32] 2025-10-12 16:20:53,752 | INFO     | sufficient remaining disk space (495838035968 B)
[2025-10-12 18:21:32] 2025-10-12 16:20:53,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:21:32] 2025-10-12 16:20:53,753 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:21:32] 2025-10-12 16:20:53,753 | INFO     | update_server=False
[2025-10-12 18:21:32] 2025-10-12 16:20:53,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:21:32] 2025-10-12 16:20:53,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:21:32] 2025-10-12 16:20:53,753 | INFO     | aborting loop
[2025-10-12 18:21:32] 2025-10-12 16:20:54,100 | INFO     | all data control threads have been joined
[2025-10-12 18:21:32] 2025-10-12 16:20:54,330 | INFO     | all payload control threads have been joined
[2025-10-12 18:21:32] 2025-10-12 16:20:54,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:21:32] 2025-10-12 16:20:54,753 | INFO     | all job control threads have been joined
[2025-10-12 18:21:32] 2025-10-12 16:20:54,758 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:54,759 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:54,800 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:54,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,073 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,106 | INFO     | [data] control thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,336 | INFO     | [payload] control thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,368 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:21:32] 2025-10-12 16:20:55,648 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:55,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:21:32] 2025-10-12 16:20:55,759 | INFO     | [job] control thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:56,091 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:56,170 | INFO     | [job] validate thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:56,633 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:56,760 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:20:59,439 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:21:32] 2025-10-12 16:21:21,947 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:21:32] 2025-10-12 16:21:23,452 | INFO     | PID=23741 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:21:32] 2025-10-12 16:21:23,452 | INFO     | .. there are 9 such processes running
[2025-10-12 18:21:32] 2025-10-12 16:21:23,452 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:21:32] 2025-10-12 16:21:23,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:21:32] 2025-10-12 16:21:23,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:21:32] 2025-10-12 16:21:23,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695617713984)>', '<ExcThread(monitor, started 139694734038784)>']
[2025-10-12 18:21:32] 2025-10-12 16:21:24,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:21:32] 2025-10-12 16:21:24,457 | INFO     | [monitor] control thread has ended
[2025-10-12 18:21:32] 2025-10-12 16:21:28,829 | INFO     | all workflow threads have been joined
[2025-10-12 18:21:32] 2025-10-12 16:21:28,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:21:32] 2025-10-12 16:21:28,830 | INFO     | traces error code: 0
[2025-10-12 18:21:32] 2025-10-12 16:21:28,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:21:32] 2025-10-12 16:21:29,071 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:21:32] 2025-10-12 16:21:29,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:21:32] 2025-10-12 16:21:29,113 [wrapper] pilotpid: 23741
[2025-10-12 18:21:32] 2025-10-12 16:21:29,124 [wrapper] Pilot exit status: 0
[2025-10-12 18:21:32] 2025-10-12 16:21:29,521 [wrapper] pandaids: 6839866217
[2025-10-12 18:21:32] 2025-10-12 16:21:30,397 [wrapper] cleanup supervisor_pilot 24381 23742
[2025-10-12 18:21:32] 2025-10-12 16:21:30,501 [wrapper] Test setup, not cleaning
[2025-10-12 18:21:32] 2025-10-12 16:21:30,582 [wrapper] apfmon messages muted
[2025-10-12 18:21:32] 2025-10-12 16:21:30,680 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:21:32] 2025-10-12 16:21:30,729 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:21:32]  *** Error codes and diagnostics ***
[2025-10-12 18:21:32]     "exeErrorCode": 0,
[2025-10-12 18:21:32]     "exeErrorDiag": "",
[2025-10-12 18:21:32]     "pilotErrorCode": 0,
[2025-10-12 18:21:32]     "pilotErrorDiag": "",
[2025-10-12 18:21:32]  *** Listing of results directory ***
[2025-10-12 18:21:32] total 412436
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-12 18:21:32] -rwx------. 1 boinc boinc     36292 Oct 12 12:14 runpilot2-wrapper.sh
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:14 queuedata.json
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:21:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:08 run_atlas
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:08 job.xml
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc      6389 Oct 12 14:08 init_data.xml
[2025-10-12 18:21:32] -rw-r--r--. 2 boinc boinc 219341025 Oct 12 14:08 EVNT.46676267._003615.pool.root.1
[2025-10-12 18:21:32] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:08 start_atlas.sh
[2025-10-12 18:21:32] drwxrwx--x. 2 boinc boinc        68 Oct 12 14:08 shared
[2025-10-12 18:21:32] -rw-r--r--. 2 boinc boinc    569679 Oct 12 14:08 input.tar.gz
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:08 boinc_lockfile
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc      2550 Oct 12 14:08 pandaJob.out
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc    975520 Oct 12 14:11 agis_schedconf.cvmfs.json
[2025-10-12 18:21:32] drwx------. 5 boinc boinc      4096 Oct 12 14:11 pilot3
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc 194161839 Oct 12 18:17 HITS.46676269._075935.pool.root.1
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc       531 Oct 12 18:18 boinc_task_state.xml
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc      1030 Oct 12 18:19 memory_monitor_summary.json
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc   1560580 Oct 12 18:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc    472937 Oct 12 18:19 log.46676269._075935.job.log.tgz.1
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc        95 Oct 12 18:20 pilot_heartbeat.json
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc      7785 Oct 12 18:20 heartbeat.json
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc        28 Oct 12 18:21 wrapper_checkpoint.txt
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:21 boinc_mmap_file
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc      4884 Oct 12 18:21 pilotlog.txt
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc   1995043 Oct 12 18:21 log.46676269._075935.job.log.1
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc       357 Oct 12 18:21 output.list
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:21 runtime_log
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc   2488320 Oct 12 18:21 result.tar.gz
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc      8703 Oct 12 18:21 runtime_log.err
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc       657 Oct 12 18:21 EElKDmbH8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsdTMDmdAzXVm.diag
[2025-10-12 18:21:32] -rw-r--r--. 1 boinc boinc     20726 Oct 12 18:21 stderr.txt
[2025-10-12 18:21:32] HITS file was successfully produced:
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc 194161839 Oct 12 18:17 shared/HITS.pool.root.1
[2025-10-12 18:21:32]  *** Contents of shared directory: ***
[2025-10-12 18:21:32] total 406824
[2025-10-12 18:21:32] -rw-r--r--. 2 boinc boinc 219341025 Oct 12 14:08 ATLAS.root_0
[2025-10-12 18:21:32] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:08 start_atlas.sh
[2025-10-12 18:21:32] -rw-r--r--. 2 boinc boinc    569679 Oct 12 14:08 input.tar.gz
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc 194161839 Oct 12 18:17 HITS.pool.root.1
[2025-10-12 18:21:32] -rw-------. 1 boinc boinc   2488320 Oct 12 18:21 result.tar.gz
18:21:33 (19649): run_atlas exited; CPU time 54724.734892
18:21:33 (19649): called boinc_finish(0)

</stderr_txt>
]]>

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