Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:11:10 (2117201): wrapper (7.7.26015): starting
05:11:10 (2117201): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 05:11:10] Arguments: --nthreads 12
[2025-10-12 05:11:10] Threads: 12
[2025-10-12 05:11:10] Checking for CVMFS
[2025-10-12 05:11:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:11:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:11:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:11:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:11:11] 2.11.5.0 2453 32487 220036 151619 2 818 31724624 45568000 19391 130560 0 325502634 99.861 135252242 27363 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 05:11:11] CVMFS is ok
[2025-10-12 05:11:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:11:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:11:11] Further information can be found at the LHC@home message board.
[2025-10-12 05:11:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:11:11] Checking for apptainer binary...
[2025-10-12 05:11:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:11:11] Running /usr/bin/apptainer --version
[2025-10-12 05:11:12] apptainer version 1.4.1-1.el9
[2025-10-12 05:11:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:11:12] wns0026.triumf.lcg
[2025-10-12 05:11:12] apptainer works
[2025-10-12 05:11:12] Set ATHENA_PROC_NUMBER=12
[2025-10-12 05:11:12] Set ATHENA_CORE_NUMBER=12
[2025-10-12 05:11:12] Starting ATLAS job with PandaID=6839866203
[2025-10-12 05:11:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:16:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | wrong length of table data, x=[1760271198.0], y=[1361.0] (must be same and length>=4)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | INFO     | ..............................
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . Timing measurements:
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . get job = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . initial setup = 2 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . payload setup = 25 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . stage-in = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . payload execution = 62 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . stage-out = 1 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . log creation = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | ..............................
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839866203/pilotlog.txt
[2025-10-12 05:16:51] 2025-10-12 12:16:15,587 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 05:16:51] - Log from pilotlog.txt -
[2025-10-12 05:16:51] 2025-10-12 12:16:15,570 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839866203/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,571 | INFO     | extracted standard info from prmon json
[2025-10-12 05:16:51] 2025-10-12 12:16:15,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:16:51] 2025-10-12 12:16:15,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | wrong length of table data, x=[1760271198.0], y=[1361.0] (must be same and length>=4)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | INFO     | ..............................
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . Timing measurements:
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . get job = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . initial setup = 2 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . payload setup = 25 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . stage-in = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . payload execution = 62 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . stage-out = 1 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . log creation = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | ..............................
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839866203/pilotlog.txt
[2025-10-12 05:16:51] 2025-10-12 12:16:15,587 | WARNING  | 
[2025-10-12 05:16:51] [begin log extracts]
[2025-10-12 05:16:51] - Log from pilotlog.txt -
[2025-10-12 05:16:51] 2025-10-12 12:16:15,570 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839866203/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,571 | INFO     | extracted standard info from prmon json
[2025-10-12 05:16:51] 2025-10-12 12:16:15,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:16:51] 2025-10-12 12:16:15,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | WARNING  | wrong length of table data, x=[1760271198.0], y=[1361.0] (must be same and length>=4)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,572 | INFO     | ..............................
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . Timing measurements:
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . get job = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . initial setup = 2 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . payload setup = 25 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . stage-in = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . payload execution = 62 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . stage-out = 1 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | . log creation = 0 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | ..............................
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 05:16:51] 2025-10-12 12:16:15,573 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839866203/pilotlog.txt
[2025-10-12 05:16:51] [end log extracts]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,587 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,589 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 05:16:51] 2025-10-12 12:16:15,679 | INFO     | 
[2025-10-12 05:16:51] 2025-10-12 12:16:15,679 | INFO     | job summary report
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | --------------------------------------------------
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | PanDA job id: 6839866203
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | task id: 46676269
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 05:13:47,861 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | pilot state: failed 
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | transexitcode: 65
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | exeerrorcode: 65
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | exitcode: 65
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 05:16:51] 2025-10-12 12:16:15,680 | INFO     | nevents: 0
[2025-10-12 05:16:51] 2025-10-12 12:16:15,682 | INFO     | neventsw: 0
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | pid: 2135050
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | pgrp: 2135050
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | corecount: 12
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | event service: False
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | sizes: {0: 2348854, 1: 2348854, 11: 2348882, 16: 2349172, 22: 2349200, 92: 2372486, 93: 2372590, 95: 2376910, 97: 2376938, 230: 2377104}
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | --------------------------------------------------
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | 
[2025-10-12 05:16:51] 2025-10-12 12:16:15,683 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 05:16:51] 2025-10-12 12:16:15,728 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:16:51] 2025-10-12 12:16:15,730 | INFO     | job 6839866203 has completed (purged errors)
[2025-10-12 05:16:51] 2025-10-12 12:16:15,730 | INFO     | overall cleanup function is called
[2025-10-12 05:16:51] 2025-10-12 12:16:16,362 | INFO     | PID=2121456 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:16:51] 2025-10-12 12:16:16,362 | INFO     | .. there are 33 such processes running
[2025-10-12 05:16:51] 2025-10-12 12:16:16,737 | INFO     | --- collectZombieJob: --- 10, [2135050]
[2025-10-12 05:16:51] 2025-10-12 12:16:16,737 | INFO     | zombie collector waiting for pid 2135050
[2025-10-12 05:16:51] 2025-10-12 12:16:16,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:16:51] 2025-10-12 12:16:16,737 | INFO     | collected zombie processes
[2025-10-12 05:16:51] 2025-10-12 12:16:16,737 | INFO     | will attempt to kill all subprocesses of pid=2135050
[2025-10-12 05:16:51] 2025-10-12 12:16:16,989 | INFO     | process IDs to be killed: [2135050] (in reverse order)
[2025-10-12 05:16:51] 2025-10-12 12:16:17,062 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:16:51] 2025-10-12 12:16:17,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:16:51] 2025-10-12 12:16:17,072 | INFO     | did not find any defunct processes belonging to 2135050
[2025-10-12 05:16:51] 2025-10-12 12:16:17,082 | INFO     | did not find any defunct processes belonging to 2135050
[2025-10-12 05:16:51] 2025-10-12 12:16:17,082 | INFO     | ready for new job
[2025-10-12 05:16:51] 2025-10-12 12:16:17,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:16:51] 2025-10-12 12:16:17,084 | INFO     | ***************************************
[2025-10-12 05:16:51] 2025-10-12 12:16:17,084 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:16:51] 2025-10-12 12:16:17,084 | INFO     | ***************************************
[2025-10-12 05:16:51] 2025-10-12 12:16:17,084 | INFO     | 
[2025-10-12 05:16:51] 2025-10-12 12:16:17,086 | INFO     | architecture information:
[2025-10-12 05:16:51] 2025-10-12 12:16:17,088 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:16:51] 2025-10-12 12:16:17,102 | INFO     | cat /etc/os-release:
[2025-10-12 05:16:51] NAME="CentOS Linux"
[2025-10-12 05:16:51] VERSION="7 (Core)"
[2025-10-12 05:16:51] ID="centos"
[2025-10-12 05:16:51] ID_LIKE="rhel fedora"
[2025-10-12 05:16:51] VERSION_ID="7"
[2025-10-12 05:16:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:16:51] ANSI_COLOR="0;31"
[2025-10-12 05:16:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:16:51] HOME_URL="https://www.centos.org/"
[2025-10-12 05:16:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:16:51] 
[2025-10-12 05:16:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:16:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:16:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:16:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:16:51] 
[2025-10-12 05:16:51] 2025-10-12 12:16:17,103 | INFO     | ***************************************
[2025-10-12 05:16:51] 2025-10-12 12:16:17,606 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 05:16:51] 2025-10-12 12:16:17,642 | INFO     | sufficient remaining disk space (1914657832960 B)
[2025-10-12 05:16:51] 2025-10-12 12:16:17,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:16:51] 2025-10-12 12:16:17,642 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:16:51] 2025-10-12 12:16:17,642 | INFO     | update_server=False
[2025-10-12 05:16:51] 2025-10-12 12:16:17,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:16:51] 2025-10-12 12:16:17,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:16:51] 2025-10-12 12:16:17,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:16:51] 2025-10-12 12:16:17,645 | INFO     | aborting loop
[2025-10-12 05:16:51] 2025-10-12 12:16:17,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:16:51] 2025-10-12 12:16:17,684 | INFO     | all data control threads have been joined
[2025-10-12 05:16:51] 2025-10-12 12:16:17,802 | INFO     | all payload control threads have been joined
[2025-10-12 05:16:51] 2025-10-12 12:16:17,820 | INFO     | all job control threads have been joined
[2025-10-12 05:16:51] 2025-10-12 12:16:18,648 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:18,650 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:18,655 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:18,690 | INFO     | [data] control thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:18,809 | INFO     | [payload] control thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:18,826 | INFO     | [job] control thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,272 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,482 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,511 | INFO     | [job] validate thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,519 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,579 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,650 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,786 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:19,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:16:51] 2025-10-12 12:16:20,085 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:23,943 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:16:51] 2025-10-12 12:16:44,994 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:16:51] 2025-10-12 12:16:45,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505976932160)>', '<ExcThread(monitor, started 140505216182016)>']
[2025-10-12 05:16:51] 2025-10-12 12:16:48,691 | INFO     | PID=2121456 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:16:51] 2025-10-12 12:16:48,691 | INFO     | .. there are 33 such processes running
[2025-10-12 05:16:51] 2025-10-12 12:16:48,692 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:16:51] 2025-10-12 12:16:48,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:16:51] 2025-10-12 12:16:48,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:16:51] 2025-10-12 12:16:48,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:16:51] 2025-10-12 12:16:48,692 | INFO     | [monitor] control thread has ended
[2025-10-12 05:16:51] 2025-10-12 12:16:50,837 | INFO     | all workflow threads have been joined
[2025-10-12 05:16:51] 2025-10-12 12:16:50,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:16:51] 2025-10-12 12:16:50,838 | INFO     | traces error code: 0
[2025-10-12 05:16:51] 2025-10-12 12:16:50,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:16:51] 2025-10-12 12:16:51,348 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:16:51] 2025-10-12 12:16:51,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:16:51] 2025-10-12 12:16:51,383 [wrapper] pilotpid: 2121456
[2025-10-12 05:16:51] 2025-10-12 12:16:51,415 [wrapper] Pilot exit status: 0
[2025-10-12 05:16:51] 2025-10-12 12:16:51,468 [wrapper] pandaids: 6839866203
[2025-10-12 05:16:51] 2025-10-12 12:16:51,538 [wrapper] cleanup supervisor_pilot 2121467 2121457
[2025-10-12 05:16:51] 2025-10-12 12:16:51,540 [wrapper] Test setup, not cleaning
[2025-10-12 05:16:51] 2025-10-12 12:16:51,542 [wrapper] apfmon messages muted
[2025-10-12 05:16:51] 2025-10-12 12:16:51,544 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:16:51] 2025-10-12 12:16:51,546 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:16:51]  *** Error codes and diagnostics ***
[2025-10-12 05:16:51]     "exeErrorCode": 65,
[2025-10-12 05:16:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 05:16:51]     "pilotErrorCode": 1305,
[2025-10-12 05:16:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 05:16:51]  *** Listing of results directory ***
[2025-10-12 05:16:51] total 218244
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc    557409 Oct 12 02:51 pilot3.tar.gz
[2025-10-12 05:16:51] -rwx------. 1 boinc boinc     36292 Oct 12 03:14 runpilot2-wrapper.sh
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc      5112 Oct 12 03:14 queuedata.json
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc       100 Oct 12 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:16:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 05:11 run_atlas
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc       105 Oct 12 05:11 job.xml
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc      6593 Oct 12 05:11 init_data.xml
[2025-10-12 05:16:51] -rw-r--r--. 2 boinc boinc 219341025 Oct 12 05:11 EVNT.46676267._003615.pool.root.1
[2025-10-12 05:16:51] drwxrwx--x. 2 boinc boinc      4096 Oct 12 05:11 shared
[2025-10-12 05:16:51] -rw-r--r--. 2 boinc boinc    569675 Oct 12 05:11 input.tar.gz
[2025-10-12 05:16:51] -rw-r--r--. 2 boinc boinc     15120 Oct 12 05:11 start_atlas.sh
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc         0 Oct 12 05:11 boinc_lockfile
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc      2550 Oct 12 05:11 pandaJob.out
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc    975520 Oct 12 05:11 agis_schedconf.cvmfs.json
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc   1560580 Oct 12 05:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:16:51] drwx------. 5 boinc boinc      4096 Oct 12 05:11 pilot3
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc       523 Oct 12 05:13 boinc_task_state.xml
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc       975 Oct 12 05:13 memory_monitor_summary.json
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc     22662 Oct 12 05:13 log.46676269._075921.job.log.tgz.1
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc      8401 Oct 12 05:16 heartbeat.json
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc        95 Oct 12 05:16 pilot_heartbeat.json
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc      8192 Oct 12 05:16 boinc_mmap_file
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc        22 Oct 12 05:16 wrapper_checkpoint.txt
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc      4823 Oct 12 05:16 pilotlog.txt
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc     94507 Oct 12 05:16 log.46676269._075921.job.log.1
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc       188 Oct 12 05:16 output.list
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc       620 Oct 12 05:16 runtime_log
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc    133120 Oct 12 05:16 result.tar.gz
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc      8528 Oct 12 05:16 runtime_log.err
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc       647 Oct 12 05:16 MrFKDmbH8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmedTMDmcBjCpm.diag
[2025-10-12 05:16:51] -rw-r--r--. 1 boinc boinc     21937 Oct 12 05:16 stderr.txt
[2025-10-12 05:16:51] No HITS result produced
[2025-10-12 05:16:51]  *** Contents of shared directory: ***
[2025-10-12 05:16:51] total 214916
[2025-10-12 05:16:51] -rw-r--r--. 2 boinc boinc 219341025 Oct 12 05:11 ATLAS.root_0
[2025-10-12 05:16:51] -rw-r--r--. 2 boinc boinc    569675 Oct 12 05:11 input.tar.gz
[2025-10-12 05:16:51] -rw-r--r--. 2 boinc boinc     15120 Oct 12 05:11 start_atlas.sh
[2025-10-12 05:16:51] -rw-------. 1 boinc boinc    133120 Oct 12 05:16 result.tar.gz
05:16:53 (2117201): run_atlas exited; CPU time 28.837316
05:16:53 (2117201): called boinc_finish(0)

</stderr_txt>
]]>

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