Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:05:57 (28730): wrapper (7.7.26015): starting
08:05:57 (28730): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:05:57] Arguments: --nthreads 12
[2025-10-12 08:05:57] Threads: 12
[2025-10-12 08:05:57] Checking for CVMFS
[2025-10-12 08:05:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:05:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:05:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:05:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:05:58] 2.11.2.0 30551 52800 87020 151619 0 57 14112946 20275201 1 130560 0 30419067 99.957 2395016 39790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:05:58] CVMFS is ok
[2025-10-12 08:05:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:05:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:05:58] Further information can be found at the LHC@home message board.
[2025-10-12 08:05:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:05:58] Checking for apptainer binary...
[2025-10-12 08:05:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:05:58] Running /usr/bin/apptainer --version
[2025-10-12 08:05:58] apptainer version 1.3.2-1.el7
[2025-10-12 08:05:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:05:59] c-205-16.aglt2.org
[2025-10-12 08:05:59] apptainer works
[2025-10-12 08:05:59] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:05:59] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:05:59] Starting ATLAS job with PandaID=6839637096
[2025-10-12 08:05:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:17:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:17:27]  status_code=0
[2025-10-12 09:17:27]  storage_token=
[2025-10-12 09:17:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839637096/log.46676269._073354.job.log.tgz.1
[2025-10-12 09:17:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/29/log.46676269._073354.job.log.tgz.1
[2025-10-12 09:17:27]  workdir=None
[2025-10-12 09:17:27] ]
[2025-10-12 09:17:27] 2025-10-12 13:16:44,089 | INFO     | transferring file log.46676269._073354.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839637096/log.46676269._073354.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 09:17:27] 2025-10-12 13:16:44,089 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839637096/log.46676269._073354.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._073354.job
[2025-10-12 09:17:27] 2025-10-12 13:16:44,114 | INFO     | adding to output.list: log.46676269._073354.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/29/log.46676269._073354.job.log.tg
[2025-10-12 09:17:27] 2025-10-12 13:16:44,115 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 09:17:27] 2025-10-12 13:16:44,115 | INFO     | summary of transferred files:
[2025-10-12 09:17:27] 2025-10-12 13:16:44,115 | INFO     |  -- lfn=log.46676269._073354.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 09:17:27] 2025-10-12 13:16:44,115 | INFO     | stage-out finished correctly
[2025-10-12 09:17:27] 2025-10-12 13:16:44,293 | INFO     | time since job start (4230s) is within the limit (172800.0s)
[2025-10-12 09:17:27] 2025-10-12 13:16:46,299 | INFO     | time since job start (4232s) is within the limit (172800.0s)
[2025-10-12 09:17:27] 2025-10-12 13:16:46,500 | INFO     | monitor loop #316: job 0:6839637096 is in state 'finished'
[2025-10-12 09:17:27] 2025-10-12 13:16:46,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:17:27] 2025-10-12 13:16:47,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 09:17:27] 2025-10-12 13:16:48,305 | INFO     | time since job start (4234s) is within the limit (172800.0s)
[2025-10-12 09:17:27] 2025-10-12 13:16:48,998 | INFO     | job 6839637096 has state=finished
[2025-10-12 09:17:27] 2025-10-12 13:16:48,998 | INFO     | preparing for final server update for job 6839637096 in state='finished'
[2025-10-12 09:17:27] 2025-10-12 13:16:49,016 | INFO     | monitor loop #317: job 0:6839637096 is in state 'finished'
[2025-10-12 09:17:27] 2025-10-12 13:16:49,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:17:27] 2025-10-12 13:16:49,069 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 09:17:27] 2025-10-12 13:16:49,069 | INFO     | this job has now completed (state=finished)
[2025-10-12 09:17:27] 2025-10-12 13:16:49,069 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 09:17:27] 2025-10-12 13:16:49,070 | INFO     | log transfer has been attempted: DONE
[2025-10-12 09:17:27] 2025-10-12 13:16:49,070 | INFO     | job 6839637096 has finished - writing final server update
[2025-10-12 09:17:27] 2025-10-12 13:16:49,070 | INFO     | total number of processed events: 400 (read)
[2025-10-12 09:17:27] 2025-10-12 13:16:49,071 | INFO     | executing command: lscpu
[2025-10-12 09:17:27] 2025-10-12 13:16:49,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 09:17:27] 2025-10-12 13:16:50,310 | INFO     | time since job start (4236s) is within the limit (172800.0s)
[2025-10-12 09:17:27] 2025-10-12 13:16:51,519 | INFO     | monitor loop #318: job 0:6839637096 is in state 'finished'
[2025-10-12 09:17:27] 2025-10-12 13:16:51,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:17:27] 2025-10-12 13:16:52,316 | INFO     | time since job start (4238s) is within the limit (172800.0s)
[2025-10-12 09:17:27] 2025-10-12 13:16:53,442 | INFO     | PID=32473 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 09:17:27] 2025-10-12 13:16:53,974 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 09:17:27] 2025-10-12 13:16:53,978 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-12 09:17:27] 2025-10-12 13:16:53,980 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839637096/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:17:27] 2025-10-12 13:16:53,981 | INFO     | extracted standard info from prmon json
[2025-10-12 09:17:27] 2025-10-12 13:16:53,982 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:17:27] 2025-10-12 13:16:53,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:17:27] 2025-10-12 13:16:53,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:17:27] 2025-10-12 13:16:53,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:17:27] 2025-10-12 13:16:53,984 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:17:27] 2025-10-12 13:16:53,984 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 09:17:27] 2025-10-12 13:16:53,984 | INFO     | sum of deviations: -590607734.0
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | mean x: 1760272969.5
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | mean y: 2680027.064516129
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | -- intersect: 14074123547.778835
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | intersect: 14074123547.778835
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | chi2: 0.016166132185045718
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | -- intersect: 14074123547.778835
[2025-10-12 09:17:27] 2025-10-12 13:16:53,985 | INFO     | current memory leak: -7.99 B/s (using 62 data points, chi2=0.02)
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | could have reported an average CPU frequency of 2063 MHz (6 samples)
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | ..............................
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . Timing measurements:
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . get job = 0 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . initial setup = 2 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . payload setup = 7 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . stage-in = 0 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . payload execution = 4201 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,986 | INFO     | . stage-out = 0 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,987 | INFO     | . log creation = 0 s
[2025-10-12 09:17:27] 2025-10-12 13:16:53,987 | INFO     | ..............................
[2025-10-12 09:17:27] 2025-10-12 13:16:54,068 | INFO     | 
[2025-10-12 09:17:27] 2025-10-12 13:16:54,068 | INFO     | job summary report
[2025-10-12 09:17:27] 2025-10-12 13:16:54,068 | INFO     | --------------------------------------------------
[2025-10-12 09:17:27] 2025-10-12 13:16:54,068 | INFO     | PanDA job id: 6839637096
[2025-10-12 09:17:27] 2025-10-12 13:16:54,069 | INFO     | task id: 46676269
[2025-10-12 09:17:27] 2025-10-12 13:16:54,069 | INFO     | errors: (none)
[2025-10-12 09:17:27] 2025-10-12 13:16:54,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:17:27] 2025-10-12 13:16:54,069 | INFO     | pilot state: finished 
[2025-10-12 09:17:27] 2025-10-12 13:16:54,069 | INFO     | transexitcode: 0
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | exeerrorcode: 0
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | exeerrordiag: 
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | exitcode: 0
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | exitmsg: OK
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | cpuconsumptiontime: 45012 s
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | nevents: 400
[2025-10-12 09:17:27] 2025-10-12 13:16:54,070 | INFO     | neventsw: 0
[2025-10-12 09:17:27] 2025-10-12 13:16:54,071 | INFO     | pid: 6629
[2025-10-12 09:17:27] 2025-10-12 13:16:54,071 | INFO     | pgrp: 6629
[2025-10-12 09:17:27] 2025-10-12 13:16:54,071 | INFO     | corecount: 12
[2025-10-12 09:17:27] 2025-10-12 13:16:54,071 | INFO     | event service: False
[2025-10-12 09:17:27] 2025-10-12 13:16:54,071 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4212: 2375071, 4213: 2384069, 4217: 2384253, 4223: 2384447}
[2025-10-12 09:17:27] 2025-10-12 13:16:54,071 | INFO     | --------------------------------------------------
[2025-10-12 09:17:27] 2025-10-12 13:16:54,072 | INFO     | 
[2025-10-12 09:17:27] 2025-10-12 13:16:54,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:17:27] 2025-10-12 13:16:54,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:17:27] 2025-10-12 13:16:54,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:17:27] 2025-10-12 13:16:54,100 | INFO     | job 6839637096 has completed (purged errors)
[2025-10-12 09:17:27] 2025-10-12 13:16:54,100 | INFO     | overall cleanup function is called
[2025-10-12 09:17:27] 2025-10-12 13:16:55,108 | INFO     | --- collectZombieJob: --- 10, [6629]
[2025-10-12 09:17:27] 2025-10-12 13:16:55,108 | INFO     | zombie collector waiting for pid 6629
[2025-10-12 09:17:27] 2025-10-12 13:16:55,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:17:27] 2025-10-12 13:16:55,109 | INFO     | collected zombie processes
[2025-10-12 09:17:27] 2025-10-12 13:16:55,109 | INFO     | will attempt to kill all subprocesses of pid=6629
[2025-10-12 09:17:27] 2025-10-12 13:16:55,199 | INFO     | process IDs to be killed: [6629] (in reverse order)
[2025-10-12 09:17:27] 2025-10-12 13:16:55,257 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:17:27] 2025-10-12 13:16:55,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:17:27] 2025-10-12 13:16:55,259 | INFO     | did not find any defunct processes belonging to 6629
[2025-10-12 09:17:27] 2025-10-12 13:16:55,261 | INFO     | did not find any defunct processes belonging to 6629
[2025-10-12 09:17:27] 2025-10-12 13:16:55,262 | INFO     | ready for new job
[2025-10-12 09:17:27] 2025-10-12 13:16:55,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:17:27] 2025-10-12 13:16:55,263 | INFO     | ***************************************
[2025-10-12 09:17:27] 2025-10-12 13:16:55,263 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:17:27] 2025-10-12 13:16:55,263 | INFO     | ***************************************
[2025-10-12 09:17:27] 2025-10-12 13:16:55,263 | INFO     | 
[2025-10-12 09:17:27] 2025-10-12 13:16:55,264 | INFO     | architecture information:
[2025-10-12 09:17:27] 2025-10-12 13:16:55,264 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:17:27] 2025-10-12 13:16:55,281 | INFO     | cat /etc/os-release:
[2025-10-12 09:17:27] NAME="CentOS Linux"
[2025-10-12 09:17:27] VERSION="7 (Core)"
[2025-10-12 09:17:27] ID="centos"
[2025-10-12 09:17:27] ID_LIKE="rhel fedora"
[2025-10-12 09:17:27] VERSION_ID="7"
[2025-10-12 09:17:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:17:27] ANSI_COLOR="0;31"
[2025-10-12 09:17:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:17:27] HOME_URL="https://www.centos.org/"
[2025-10-12 09:17:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:17:27] 
[2025-10-12 09:17:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:17:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:17:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:17:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:17:27] 
[2025-10-12 09:17:27] 2025-10-12 13:16:55,281 | INFO     | ***************************************
[2025-10-12 09:17:27] 2025-10-12 13:16:55,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:17:27] 2025-10-12 13:16:55,802 | INFO     | sufficient remaining disk space (29503782912 B)
[2025-10-12 09:17:27] 2025-10-12 13:16:55,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:17:27] 2025-10-12 13:16:55,802 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:17:27] 2025-10-12 13:16:55,802 | INFO     | update_server=False
[2025-10-12 09:17:27] 2025-10-12 13:16:55,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:17:27] 2025-10-12 13:16:55,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:17:27] 2025-10-12 13:16:55,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:17:27] 2025-10-12 13:16:55,803 | INFO     | aborting loop
[2025-10-12 09:17:27] 2025-10-12 13:16:55,955 | INFO     | all data control threads have been joined
[2025-10-12 09:17:27] 2025-10-12 13:16:56,680 | INFO     | all payload control threads have been joined
[2025-10-12 09:17:27] 2025-10-12 13:16:56,808 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:56,809 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:56,809 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:56,961 | INFO     | [data] control thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:57,174 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:57,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:17:27] 2025-10-12 13:16:57,255 | INFO     | all job control threads have been joined
[2025-10-12 09:17:27] 2025-10-12 13:16:57,352 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:57,536 | INFO     | [job] validate thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:57,686 | INFO     | [payload] control thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:57,790 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:57,933 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:58,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:17:27] 2025-10-12 13:16:58,138 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:58,260 | INFO     | [job] control thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:58,308 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:16:59,222 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:17:02,027 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:17:05,864 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:17:27] 2025-10-12 13:17:06,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:17:27] 2025-10-12 13:17:21,076 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:17:27] 2025-10-12 13:17:21,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710149404480)>', '<ExcThread(monitor, started 140709436847872)>']
[2025-10-12 09:17:27] 2025-10-12 13:17:25,645 | INFO     | PID=32473 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 09:17:27] 2025-10-12 13:17:25,646 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:17:27] 2025-10-12 13:17:25,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:17:27] 2025-10-12 13:17:25,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:17:27] 2025-10-12 13:17:25,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:17:27] 2025-10-12 13:17:25,646 | INFO     | [monitor] control thread has ended
[2025-10-12 09:17:27] 2025-10-12 13:17:26,704 | INFO     | all workflow threads have been joined
[2025-10-12 09:17:27] 2025-10-12 13:17:26,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:17:27] 2025-10-12 13:17:26,707 | INFO     | traces error code: 0
[2025-10-12 09:17:27] 2025-10-12 13:17:26,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:17:27] 2025-10-12 13:17:26,810 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:17:27] 2025-10-12 13:17:26,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:17:27] 2025-10-12 13:17:26,818 [wrapper] pilotpid: 32473
[2025-10-12 09:17:27] 2025-10-12 13:17:26,822 [wrapper] Pilot exit status: 0
[2025-10-12 09:17:27] 2025-10-12 13:17:26,838 [wrapper] pandaids: 6839637096
[2025-10-12 09:17:27] 2025-10-12 13:17:26,879 [wrapper] cleanup supervisor_pilot 27179 32474
[2025-10-12 09:17:27] 2025-10-12 13:17:26,883 [wrapper] Test setup, not cleaning
[2025-10-12 09:17:27] 2025-10-12 13:17:26,887 [wrapper] apfmon messages muted
[2025-10-12 09:17:27] 2025-10-12 13:17:26,891 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:17:27] 2025-10-12 13:17:26,895 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:17:27]  *** Error codes and diagnostics ***
[2025-10-12 09:17:27]     "exeErrorCode": 0,
[2025-10-12 09:17:27]     "exeErrorDiag": "",
[2025-10-12 09:17:27]     "pilotErrorCode": 0,
[2025-10-12 09:17:27]     "pilotErrorDiag": "",
[2025-10-12 09:17:27]  *** Listing of results directory ***
[2025-10-12 09:17:27] total 406112
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 09:17:27] -rwx------ 1 boincer umatlas     36292 Oct 12 03:11 runpilot2-wrapper.sh
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:11 queuedata.json
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:17:27] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:05 run_atlas
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:05 job.xml
[2025-10-12 09:17:27] -rw-r--r-- 2 boincer umatlas 223014733 Oct 12 08:05 EVNT.46676267._003494.pool.root.1
[2025-10-12 09:17:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:05 start_atlas.sh
[2025-10-12 09:17:27] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:05 shared
[2025-10-12 09:17:27] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 08:05 input.tar.gz
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:05 boinc_lockfile
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 08:05 pandaJob.out
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas    975520 Oct 12 08:06 agis_schedconf.cvmfs.json
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas   1560580 Oct 12 08:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:17:27] drwx------ 5 boincer umatlas      4096 Oct 12 08:06 pilot3
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 09:12 init_data.xml
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas 186959093 Oct 12 09:16 HITS.46676269._073354.pool.root.1
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:16 boinc_task_state.xml
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas      1049 Oct 12 09:16 memory_monitor_summary.json
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas    372470 Oct 12 09:16 log.46676269._073354.job.log.tgz.1
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas      7847 Oct 12 09:16 heartbeat.json
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:17 wrapper_checkpoint.txt
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:17 boinc_mmap_file
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas        95 Oct 12 09:17 pilot_heartbeat.json
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas      4818 Oct 12 09:17 pilotlog.txt
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas    617751 Oct 12 09:17 log.46676269._073354.job.log.1
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas       357 Oct 12 09:17 output.list
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:17 runtime_log
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas   1013760 Oct 12 09:17 result.tar.gz
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas       659 Oct 12 09:17 x62LDmuP5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7yiNDmP2BOqn.diag
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 09:17 runtime_log.err
[2025-10-12 09:17:27] -rw-r--r-- 1 boincer umatlas     22167 Oct 12 09:17 stderr.txt
[2025-10-12 09:17:27] HITS file was successfully produced:
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas 186959093 Oct 12 09:16 shared/HITS.pool.root.1
[2025-10-12 09:17:27]  *** Contents of shared directory: ***
[2025-10-12 09:17:27] total 401940
[2025-10-12 09:17:27] -rw-r--r-- 2 boincer umatlas 223014733 Oct 12 08:05 ATLAS.root_0
[2025-10-12 09:17:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:05 start_atlas.sh
[2025-10-12 09:17:27] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 08:05 input.tar.gz
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas 186959093 Oct 12 09:16 HITS.pool.root.1
[2025-10-12 09:17:27] -rw------- 1 boincer umatlas   1013760 Oct 12 09:17 result.tar.gz
09:17:28 (28730): run_atlas exited; CPU time 44997.945032
09:17:28 (28730): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN