Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:54:52 (3544820): wrapper (7.7.26015): starting
23:54:52 (3544820): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 23:54:52] Arguments: --nthreads 4
[2025-10-12 23:54:52] Threads: 4
[2025-10-12 23:54:52] Checking for CVMFS
[2025-10-12 23:54:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:54:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:54:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:54:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:54:52] 2.9.2.0 1854055 4871 100952 151638 0 57 29591405 36864001 0 130560 0 4387590 99.992 166846 1003 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 23:54:52] CVMFS is ok
[2025-10-12 23:54:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:54:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:54:52] Further information can be found at the LHC@home message board.
[2025-10-12 23:54:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:54:52] Checking for apptainer binary...
[2025-10-12 23:54:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:54:52] Running /usr/bin/apptainer --version
[2025-10-12 23:54:52] apptainer version 1.4.1-1.1
[2025-10-12 23:54:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:54:52] thA332a
[2025-10-12 23:54:52] apptainer works
[2025-10-12 23:54:52] Set ATHENA_PROC_NUMBER=4
[2025-10-12 23:54:52] Set ATHENA_CORE_NUMBER=4
[2025-10-12 23:54:52] Starting ATLAS job with PandaID=6839866124
[2025-10-12 23:54:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:10:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:10:11] 2025-10-12 23:09:12,000 | INFO     | all data control threads have been joined
[2025-10-13 01:10:11] 2025-10-12 23:09:12,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:10:11] 2025-10-12 23:09:12,506 | INFO     | all payload control threads have been joined
[2025-10-13 01:10:11] 2025-10-12 23:09:12,795 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:12,795 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:12,804 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:13,002 | INFO     | all job control threads have been joined
[2025-10-13 01:10:11] 2025-10-12 23:09:13,005 | INFO     | [data] control thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:13,071 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:13,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:13,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:10:11] 2025-10-12 23:09:13,237 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:13,340 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:13,512 | INFO     | [payload] control thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:14,008 | INFO     | [job] control thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:14,019 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:14,179 | INFO     | [job] validate thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:14,286 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:14,497 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:14,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:10:11] 2025-10-12 23:09:15,754 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:17,172 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:10:11] 2025-10-12 23:09:42,080 | INFO     | PID=3548621 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:10:11] 2025-10-12 23:09:42,080 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:10:11] 2025-10-12 23:09:42,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:10:11] 2025-10-12 23:09:42,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:10:11] 2025-10-12 23:09:58,836 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-13 01:10:11] 2025-10-12 23:10:05,276 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:10:11] 2025-10-12 23:10:06,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044546901824)>', '<ExcThread(monitor, started 140043742062336)>']
[2025-10-13 01:10:11] 2025-10-12 23:10:07,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:10:11] 2025-10-12 23:10:07,209 | INFO     | [monitor] control thread has ended
[2025-10-13 01:10:11] 2025-10-12 23:10:11,445 | INFO     | all workflow threads have been joined
[2025-10-13 01:10:11] 2025-10-12 23:10:11,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:10:11] 2025-10-12 23:10:11,446 | INFO     | traces error code: 0
[2025-10-13 01:10:11] 2025-10-12 23:10:11,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:10:11] 2025-10-12 23:10:11,526 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:10:11] 2025-10-12 23:10:11,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:10:11] 2025-10-12 23:10:11,535 [wrapper] pilotpid: 3548621
[2025-10-13 01:10:11] 2025-10-12 23:10:11,539 [wrapper] Pilot exit status: 0
[2025-10-13 01:10:11] 2025-10-12 23:10:11,551 [wrapper] pandaids: 6839866124
[2025-10-13 01:10:11] 2025-10-12 23:10:11,575 [wrapper] cleanup supervisor_pilot 3570753 3548622
[2025-10-13 01:10:11] 2025-10-12 23:10:11,579 [wrapper] Test setup, not cleaning
[2025-10-13 01:10:11] 2025-10-12 23:10:11,583 [wrapper] apfmon messages muted
[2025-10-13 01:10:11] 2025-10-12 23:10:11,587 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:10:11] 2025-10-12 23:10:11,591 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:10:11]  *** Error codes and diagnostics ***
[2025-10-13 01:10:11]     "exeErrorCode": 0,
[2025-10-13 01:10:11]     "exeErrorDiag": "",
[2025-10-13 01:10:11]     "pilotErrorCode": 0,
[2025-10-13 01:10:11]     "pilotErrorDiag": "",
[2025-10-13 01:10:11]  *** Listing of results directory ***
[2025-10-13 01:10:11] total 413512
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:10 queuedata.json
[2025-10-13 01:10:11] -rwx------ 1 boinc boinc     36292 Oct 12 12:12 runpilot2-wrapper.sh
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:10:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:54 run_atlas
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:54 job.xml
[2025-10-13 01:10:11] -rw-r--r-- 2 boinc boinc 220893644 Oct 12 23:54 EVNT.46676267._003610.pool.root.1
[2025-10-13 01:10:11] -rw-r--r-- 2 boinc boinc    569682 Oct 12 23:54 input.tar.gz
[2025-10-13 01:10:11] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:54 start_atlas.sh
[2025-10-13 01:10:11] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:54 shared
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:54 boinc_setup_complete
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc      6371 Oct 12 23:54 init_data.xml
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:54 boinc_lockfile
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc      2549 Oct 12 23:54 pandaJob.out
[2025-10-13 01:10:11] -rw------- 1 boinc boinc    975528 Oct 12 23:54 agis_schedconf.cvmfs.json
[2025-10-13 01:10:11] -rw------- 1 boinc boinc   1560580 Oct 12 23:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:10:11] drwx------ 5 boinc boinc      4096 Oct 12 23:55 pilot3
[2025-10-13 01:10:11] -rw------- 1 boinc boinc 196827593 Oct 13 01:08 HITS.46676269._075842.pool.root.1
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:08 boinc_task_state.xml
[2025-10-13 01:10:11] -rw------- 1 boinc boinc      1019 Oct 13 01:08 memory_monitor_summary.json
[2025-10-13 01:10:11] -rw------- 1 boinc boinc    250338 Oct 13 01:08 log.46676269._075842.job.log.tgz.1
[2025-10-13 01:10:11] -rw------- 1 boinc boinc      7761 Oct 13 01:09 heartbeat.json
[2025-10-13 01:10:11] -rw------- 1 boinc boinc        95 Oct 13 01:09 pilot_heartbeat.json
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:09 wrapper_checkpoint.txt
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:09 boinc_mmap_file
[2025-10-13 01:10:11] -rw------- 1 boinc boinc      4752 Oct 13 01:10 pilotlog.txt
[2025-10-13 01:10:11] -rw------- 1 boinc boinc    658938 Oct 13 01:10 log.46676269._075842.job.log.1
[2025-10-13 01:10:11] -rw------- 1 boinc boinc       357 Oct 13 01:10 output.list
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:10 runtime_log
[2025-10-13 01:10:11] -rw------- 1 boinc boinc    931840 Oct 13 01:10 result.tar.gz
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc      8782 Oct 13 01:10 runtime_log.err
[2025-10-13 01:10:11] -rw------- 1 boinc boinc       659 Oct 13 01:10 IdzKDmzE8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmERjNDmck4rIo.diag
[2025-10-13 01:10:11] -rw-r--r-- 1 boinc boinc      7097 Oct 13 01:10 stderr.txt
[2025-10-13 01:10:11] HITS file was successfully produced:
[2025-10-13 01:10:11] -rw------- 1 boinc boinc 196827593 Oct 13 01:08 shared/HITS.pool.root.1
[2025-10-13 01:10:11]  *** Contents of shared directory: ***
[2025-10-13 01:10:11] total 409432
[2025-10-13 01:10:11] -rw-r--r-- 2 boinc boinc 220893644 Oct 12 23:54 ATLAS.root_0
[2025-10-13 01:10:11] -rw-r--r-- 2 boinc boinc    569682 Oct 12 23:54 input.tar.gz
[2025-10-13 01:10:11] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:54 start_atlas.sh
[2025-10-13 01:10:11] -rw------- 1 boinc boinc 196827593 Oct 13 01:08 HITS.pool.root.1
[2025-10-13 01:10:11] -rw------- 1 boinc boinc    931840 Oct 13 01:10 result.tar.gz
01:10:13 (3544820): run_atlas exited; CPU time 16677.883190
01:10:13 (3544820): called boinc_finish(0)

</stderr_txt>
]]>

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