Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:03:23 (440): wrapper (7.7.26015): starting
08:03:23 (440): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:03:23] Arguments: --nthreads 8
[2025-10-12 08:03:23] Threads: 8
[2025-10-12 08:03:23] Checking for CVMFS
[2025-10-12 08:03:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:03:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:03:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:03:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:03:23] 2.11.2.0 2840 2810 70688 151619 2 57 11624805 20275201 1 130560 0 1978739 99.990 97220 35494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:03:23] CVMFS is ok
[2025-10-12 08:03:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:03:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:03:23] Further information can be found at the LHC@home message board.
[2025-10-12 08:03:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:03:23] Checking for apptainer binary...
[2025-10-12 08:03:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:03:23] Running /usr/bin/apptainer --version
[2025-10-12 08:03:23] apptainer version 1.3.2-1.el7
[2025-10-12 08:03:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:03:25] c-204-39.aglt2.org
[2025-10-12 08:03:25] apptainer works
[2025-10-12 08:03:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:03:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:03:25] Starting ATLAS job with PandaID=6839866101
[2025-10-12 08:03:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:06:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:06:59] 2025-10-12 14:05:59,633 | INFO     | intersect: -67259134304.90127
[2025-10-12 10:06:59] 2025-10-12 14:05:59,633 | INFO     | chi2: 1.3677626217500625
[2025-10-12 10:06:59] 2025-10-12 14:05:59,633 | INFO     | current chi2=1.3677626217500625 (change=-0.1028842615609583 %)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,633 | INFO     | right removable region: 114
[2025-10-12 10:06:59] 2025-10-12 14:05:59,633 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,634 | INFO     | sum of deviations: 2056096622.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,634 | INFO     | mean x: 1760274435.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,634 | INFO     | mean y: 2523402.9217391303
[2025-10-12 10:06:59] 2025-10-12 14:05:59,634 | INFO     | -- intersect: -7672589915.812729
[2025-10-12 10:06:59] 2025-10-12 14:05:59,634 | INFO     | intersect: -7672589915.812729
[2025-10-12 10:06:59] 2025-10-12 14:05:59,635 | INFO     | chi2: 0.01779761514810198
[2025-10-12 10:06:59] 2025-10-12 14:05:59,635 | INFO     | current chi2=0.01779761514810198 (change=98.6974401983418 %)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,635 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 10:06:59] 2025-10-12 14:05:59,635 | INFO     | sum of deviations: 2541565427.0000005
[2025-10-12 10:06:59] 2025-10-12 14:05:59,636 | INFO     | mean x: 1760274587.5
[2025-10-12 10:06:59] 2025-10-12 14:05:59,636 | INFO     | mean y: 2522013.036363636
[2025-10-12 10:06:59] 2025-10-12 14:05:59,636 | INFO     | -- intersect: -10838272876.237356
[2025-10-12 10:06:59] 2025-10-12 14:05:59,636 | INFO     | intersect: -10838272876.237356
[2025-10-12 10:06:59] 2025-10-12 14:05:59,636 | INFO     | chi2: 0.0018948788897219207
[2025-10-12 10:06:59] 2025-10-12 14:05:59,636 | INFO     | current chi2=0.0018948788897219207 (change=89.35318651429543 %)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,637 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,637 | INFO     | sum of deviations: 1571974880.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,637 | INFO     | mean x: 1760274740.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,637 | INFO     | mean y: 2524746.5142857144
[2025-10-12 10:06:59] 2025-10-12 14:05:59,637 | INFO     | -- intersect: -7706849541.269863
[2025-10-12 10:06:59] 2025-10-12 14:05:59,638 | INFO     | intersect: -7706849541.269863
[2025-10-12 10:06:59] 2025-10-12 14:05:59,638 | INFO     | chi2: 0.00035141120745175655
[2025-10-12 10:06:59] 2025-10-12 14:05:59,638 | INFO     | current chi2=0.00035141120745175655 (change=81.4546877186791 %)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,638 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,639 | INFO     | sum of deviations: 1149375236.9999998
[2025-10-12 10:06:59] 2025-10-12 14:05:59,639 | INFO     | mean x: 1760274892.5
[2025-10-12 10:06:59] 2025-10-12 14:05:59,639 | INFO     | mean y: 2526056.54
[2025-10-12 10:06:59] 2025-10-12 14:05:59,639 | INFO     | -- intersect: -6522876943.590177
[2025-10-12 10:06:59] 2025-10-12 14:05:59,639 | INFO     | intersect: -6522876943.590177
[2025-10-12 10:06:59] 2025-10-12 14:05:59,639 | INFO     | chi2: 0.00015490180028200957
[2025-10-12 10:06:59] 2025-10-12 14:05:59,640 | INFO     | current chi2=0.00015490180028200957 (change=55.92007397678822 %)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,640 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,640 | INFO     | sum of deviations: 889310582.0000004
[2025-10-12 10:06:59] 2025-10-12 14:05:59,640 | INFO     | mean x: 1760275045.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,640 | INFO     | mean y: 2526953.305263158
[2025-10-12 10:06:59] 2025-10-12 14:05:59,641 | INFO     | -- intersect: -5886355374.430221
[2025-10-12 10:06:59] 2025-10-12 14:05:59,641 | INFO     | intersect: -5886355374.430221
[2025-10-12 10:06:59] 2025-10-12 14:05:59,641 | INFO     | chi2: 0.00011653635893905869
[2025-10-12 10:06:59] 2025-10-12 14:05:59,641 | INFO     | current chi2=0.00011653635893905869 (change=24.767589061653194 %)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,641 | INFO     | left removable region: 50
[2025-10-12 10:06:59] 2025-10-12 14:05:59,641 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | sum of deviations: 149775679.0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | mean x: 1760275624.5
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | mean y: 2530129.65625
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | -- intersect: -3241685170.5780964
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | intersect: -3241685170.5780964
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | chi2: 2.224846494684789e-05
[2025-10-12 10:06:59] 2025-10-12 14:05:59,642 | INFO     | -- intersect: -3241685170.5780964
[2025-10-12 10:06:59] 2025-10-12 14:05:59,643 | INFO     | current memory leak: 1.84 B/s (using 64 data points, chi2=0.00)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,643 | INFO     | could have reported an average CPU frequency of 1957 MHz (7 samples)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,643 | INFO     | ..............................
[2025-10-12 10:06:59] 2025-10-12 14:05:59,643 | INFO     | . Timing measurements:
[2025-10-12 10:06:59] 2025-10-12 14:05:59,643 | INFO     | . get job = 0 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,643 | INFO     | . initial setup = 2 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,644 | INFO     | . payload setup = 8 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,644 | INFO     | . stage-in = 0 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,644 | INFO     | . payload execution = 7299 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,644 | INFO     | . stage-out = 0 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,644 | INFO     | . log creation = 0 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,644 | INFO     | ..............................
[2025-10-12 10:06:59] 2025-10-12 14:05:59,733 | INFO     | 
[2025-10-12 10:06:59] 2025-10-12 14:05:59,733 | INFO     | job summary report
[2025-10-12 10:06:59] 2025-10-12 14:05:59,733 | INFO     | --------------------------------------------------
[2025-10-12 10:06:59] 2025-10-12 14:05:59,734 | INFO     | PanDA job id: 6839866101
[2025-10-12 10:06:59] 2025-10-12 14:05:59,734 | INFO     | task id: 46676269
[2025-10-12 10:06:59] 2025-10-12 14:05:59,734 | INFO     | errors: (none)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | pilot state: finished 
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | transexitcode: 0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | exeerrorcode: 0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | exeerrordiag: 
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | exitcode: 0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | exitmsg: OK
[2025-10-12 10:06:59] 2025-10-12 14:05:59,735 | INFO     | cpuconsumptiontime: 53408 s
[2025-10-12 10:06:59] 2025-10-12 14:05:59,736 | INFO     | nevents: 400
[2025-10-12 10:06:59] 2025-10-12 14:05:59,736 | INFO     | neventsw: 0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,736 | INFO     | pid: 10792
[2025-10-12 10:06:59] 2025-10-12 14:05:59,736 | INFO     | pgrp: 10792
[2025-10-12 10:06:59] 2025-10-12 14:05:59,736 | INFO     | corecount: 8
[2025-10-12 10:06:59] 2025-10-12 14:05:59,736 | INFO     | event service: False
[2025-10-12 10:06:59] 2025-10-12 14:05:59,737 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7310: 2376458, 7311: 2376457, 7312: 2385511, 7314: 2385695, 7320: 2385889}
[2025-10-12 10:06:59] 2025-10-12 14:05:59,737 | INFO     | --------------------------------------------------
[2025-10-12 10:06:59] 2025-10-12 14:05:59,737 | INFO     | 
[2025-10-12 10:06:59] 2025-10-12 14:05:59,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:06:59] 2025-10-12 14:05:59,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:06:59] 2025-10-12 14:05:59,770 | INFO     | job 6839866101 has completed (purged errors)
[2025-10-12 10:06:59] 2025-10-12 14:05:59,770 | INFO     | overall cleanup function is called
[2025-10-12 10:06:59] 2025-10-12 14:06:00,778 | INFO     | --- collectZombieJob: --- 10, [10792]
[2025-10-12 10:06:59] 2025-10-12 14:06:00,778 | INFO     | zombie collector waiting for pid 10792
[2025-10-12 10:06:59] 2025-10-12 14:06:00,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:06:59] 2025-10-12 14:06:00,779 | INFO     | collected zombie processes
[2025-10-12 10:06:59] 2025-10-12 14:06:00,779 | INFO     | will attempt to kill all subprocesses of pid=10792
[2025-10-12 10:06:59] 2025-10-12 14:06:00,868 | INFO     | process IDs to be killed: [10792] (in reverse order)
[2025-10-12 10:06:59] 2025-10-12 14:06:00,926 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:06:59] 2025-10-12 14:06:00,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:06:59] 2025-10-12 14:06:00,931 | INFO     | did not find any defunct processes belonging to 10792
[2025-10-12 10:06:59] 2025-10-12 14:06:00,935 | INFO     | did not find any defunct processes belonging to 10792
[2025-10-12 10:06:59] 2025-10-12 14:06:00,936 | INFO     | ready for new job
[2025-10-12 10:06:59] 2025-10-12 14:06:00,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:06:59] 2025-10-12 14:06:00,938 | INFO     | ***************************************
[2025-10-12 10:06:59] 2025-10-12 14:06:00,938 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:06:59] 2025-10-12 14:06:00,938 | INFO     | ***************************************
[2025-10-12 10:06:59] 2025-10-12 14:06:00,938 | INFO     | 
[2025-10-12 10:06:59] 2025-10-12 14:06:00,938 | INFO     | architecture information:
[2025-10-12 10:06:59] 2025-10-12 14:06:00,939 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:06:59] 2025-10-12 14:06:00,958 | INFO     | cat /etc/os-release:
[2025-10-12 10:06:59] NAME="CentOS Linux"
[2025-10-12 10:06:59] VERSION="7 (Core)"
[2025-10-12 10:06:59] ID="centos"
[2025-10-12 10:06:59] ID_LIKE="rhel fedora"
[2025-10-12 10:06:59] VERSION_ID="7"
[2025-10-12 10:06:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:06:59] ANSI_COLOR="0;31"
[2025-10-12 10:06:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:06:59] HOME_URL="https://www.centos.org/"
[2025-10-12 10:06:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:06:59] 
[2025-10-12 10:06:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:06:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:06:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:06:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:06:59] 
[2025-10-12 10:06:59] 2025-10-12 14:06:00,958 | INFO     | ***************************************
[2025-10-12 10:06:59] 2025-10-12 14:06:01,461 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:06:59] 2025-10-12 14:06:01,482 | INFO     | sufficient remaining disk space (18555600896 B)
[2025-10-12 10:06:59] 2025-10-12 14:06:01,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:06:59] 2025-10-12 14:06:01,482 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:06:59] 2025-10-12 14:06:01,483 | INFO     | update_server=False
[2025-10-12 10:06:59] 2025-10-12 14:06:01,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:06:59] 2025-10-12 14:06:01,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:06:59] 2025-10-12 14:06:01,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:06:59] 2025-10-12 14:06:01,484 | INFO     | aborting loop
[2025-10-12 10:06:59] 2025-10-12 14:06:02,048 | INFO     | all payload control threads have been joined
[2025-10-12 10:06:59] 2025-10-12 14:06:02,298 | INFO     | all job control threads have been joined
[2025-10-12 10:06:59] 2025-10-12 14:06:02,464 | INFO     | all data control threads have been joined
[2025-10-12 10:06:59] 2025-10-12 14:06:02,487 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:02,488 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:02,489 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:02,542 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:02,604 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:02,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:06:59] 2025-10-12 14:06:03,053 | INFO     | [payload] control thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,110 | INFO     | [job] validate thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,130 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,242 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,303 | INFO     | [job] control thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,470 | INFO     | [data] control thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:03,751 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:04,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:06:59] 2025-10-12 14:06:04,730 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:08,591 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:11,585 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:06:59] 2025-10-12 14:06:12,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:06:59] 2025-10-12 14:06:31,257 | INFO     | PID=4310 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 10:06:59] 2025-10-12 14:06:31,258 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:06:59] 2025-10-12 14:06:31,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:06:59] 2025-10-12 14:06:31,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:06:59] 2025-10-12 14:06:53,877 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:06:59] 2025-10-12 14:06:54,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735286400832)>', '<ExcThread(monitor, started 139734462486272)>']
[2025-10-12 10:06:59] 2025-10-12 14:06:54,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:06:59] 2025-10-12 14:06:54,368 | INFO     | [monitor] control thread has ended
[2025-10-12 10:06:59] 2025-10-12 14:06:59,115 | INFO     | all workflow threads have been joined
[2025-10-12 10:06:59] 2025-10-12 14:06:59,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:06:59] 2025-10-12 14:06:59,146 | INFO     | traces error code: 0
[2025-10-12 10:06:59] 2025-10-12 14:06:59,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:06:59] 2025-10-12 14:06:59,298 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:06:59] 2025-10-12 14:06:59,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:06:59] 2025-10-12 14:06:59,308 [wrapper] pilotpid: 4310
[2025-10-12 10:06:59] 2025-10-12 14:06:59,313 [wrapper] Pilot exit status: 0
[2025-10-12 10:06:59] 2025-10-12 14:06:59,333 [wrapper] pandaids: 6839866101
[2025-10-12 10:06:59] 2025-10-12 14:06:59,385 [wrapper] cleanup supervisor_pilot  7514 4311
[2025-10-12 10:06:59] 2025-10-12 14:06:59,389 [wrapper] Test setup, not cleaning
[2025-10-12 10:06:59] 2025-10-12 14:06:59,394 [wrapper] apfmon messages muted
[2025-10-12 10:06:59] 2025-10-12 14:06:59,398 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:06:59] 2025-10-12 14:06:59,402 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:06:59]  *** Error codes and diagnostics ***
[2025-10-12 10:06:59]     "exeErrorCode": 0,
[2025-10-12 10:06:59]     "exeErrorDiag": "",
[2025-10-12 10:06:59]     "pilotErrorCode": 0,
[2025-10-12 10:06:59]     "pilotErrorDiag": "",
[2025-10-12 10:06:59]  *** Listing of results directory ***
[2025-10-12 10:06:59] total 414336
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 06:10 queuedata.json
[2025-10-12 10:06:59] -rwx------ 1 boincer umatlas     36292 Oct 12 06:11 runpilot2-wrapper.sh
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:06:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:03 run_atlas
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:03 job.xml
[2025-10-12 10:06:59] -rw-r--r-- 2 boincer umatlas 219506586 Oct 12 08:03 EVNT.46676267._003609.pool.root.1
[2025-10-12 10:06:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:03 start_atlas.sh
[2025-10-12 10:06:59] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:03 shared
[2025-10-12 10:06:59] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 08:03 input.tar.gz
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:03 boinc_lockfile
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 08:03 pandaJob.out
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas    975520 Oct 12 08:03 agis_schedconf.cvmfs.json
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas   1560580 Oct 12 08:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:06:59] drwx------ 5 boincer umatlas      4096 Oct 12 08:03 pilot3
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 10:00 init_data.xml
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas 198098363 Oct 12 10:05 HITS.46676269._075819.pool.root.1
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:05 boinc_task_state.xml
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas      1049 Oct 12 10:05 memory_monitor_summary.json
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas    352781 Oct 12 10:05 log.46676269._075819.job.log.tgz.1
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas      7844 Oct 12 10:05 heartbeat.json
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:06 wrapper_checkpoint.txt
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas        95 Oct 12 10:06 pilot_heartbeat.json
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas      4817 Oct 12 10:06 pilotlog.txt
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas   1032564 Oct 12 10:06 log.46676269._075819.job.log.1
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas       357 Oct 12 10:06 output.list
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:06 runtime_log
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas   1402880 Oct 12 10:06 result.tar.gz
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 10:06 runtime_log.err
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas       659 Oct 12 10:06 OeCNDmfE8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1QjNDm3BxUVn.diag
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:06 boinc_mmap_file
[2025-10-12 10:06:59] -rw-r--r-- 1 boincer umatlas     20893 Oct 12 10:06 stderr.txt
[2025-10-12 10:06:59] HITS file was successfully produced:
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas 198098363 Oct 12 10:05 shared/HITS.pool.root.1
[2025-10-12 10:06:59]  *** Contents of shared directory: ***
[2025-10-12 10:06:59] total 409772
[2025-10-12 10:06:59] -rw-r--r-- 2 boincer umatlas 219506586 Oct 12 08:03 ATLAS.root_0
[2025-10-12 10:06:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:03 start_atlas.sh
[2025-10-12 10:06:59] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 08:03 input.tar.gz
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas 198098363 Oct 12 10:05 HITS.pool.root.1
[2025-10-12 10:06:59] -rw------- 1 boincer umatlas   1402880 Oct 12 10:06 result.tar.gz
10:07:00 (440): run_atlas exited; CPU time 53432.761498
10:07:00 (440): called boinc_finish(0)

</stderr_txt>
]]>

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