Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:27 (1628012): wrapper (7.7.26015): starting
08:10:27 (1628012): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:10:27] Arguments: --nthreads 8
[2025-10-12 08:10:27] Threads: 8
[2025-10-12 08:10:27] Checking for CVMFS
[2025-10-12 08:10:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:10:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:10:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:10:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:10:27] 2.13.2.0 7534 77319 136068 151619 2 747 35292163 40960000 22329 16776704 0 464242487 99.773 264847635 44651 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:10:27] CVMFS is ok
[2025-10-12 08:10:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:10:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:10:27] Further information can be found at the LHC@home message board.
[2025-10-12 08:10:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:10:27] Checking for apptainer binary...
[2025-10-12 08:10:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:10:27] Running /usr/bin/apptainer --version
[2025-10-12 08:10:27] apptainer version 1.4.3-1.el9
[2025-10-12 08:10:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:10:27] c-208-39.aglt2.org
[2025-10-12 08:10:27] apptainer works
[2025-10-12 08:10:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:10:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:10:27] Starting ATLAS job with PandaID=6839866161
[2025-10-12 08:10:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:29:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:29:56] 2025-10-12 13:28:20,269 | INFO     | PID=1636111 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 09:29:56] 2025-10-12 13:28:20,269 | INFO     | .. there are 31 such processes running
[2025-10-12 09:29:56] 2025-10-12 13:28:20,469 | INFO     | monitor loop #291: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:20,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:21,270 | INFO     | time since job start (4662s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:22,979 | INFO     | monitor loop #292: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:22,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:23,277 | INFO     | time since job start (4664s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:25,286 | INFO     | time since job start (4666s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:25,286 | INFO     | 4668s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 09:29:56] 2025-10-12 13:28:25,484 | INFO     | monitor loop #293: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:25,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:27,293 | INFO     | time since job start (4668s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:27,992 | INFO     | monitor loop #294: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:27,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:29,299 | INFO     | time since job start (4670s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:30,497 | INFO     | monitor loop #295: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:30,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:31,306 | INFO     | time since job start (4672s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:33,007 | INFO     | monitor loop #296: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:33,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:33,320 | INFO     | time since job start (4674s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:35,331 | INFO     | time since job start (4676s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:35,512 | INFO     | monitor loop #297: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:35,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:37,339 | INFO     | time since job start (4678s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:38,031 | INFO     | monitor loop #298: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:38,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:39,347 | INFO     | time since job start (4680s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:40,542 | INFO     | monitor loop #299: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:40,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:41,356 | INFO     | time since job start (4682s) is within the limit (172800.0s)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,009 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 09:29:56] 2025-10-12 13:28:43,032 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3675.8820546875
[2025-10-12 09:29:56] 2025-10-12 13:28:43,061 | INFO     | monitor loop #300: job 0:6839866161 is in state 'finished'
[2025-10-12 09:29:56] 2025-10-12 13:28:43,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,076 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6839866161/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,077 | INFO     | extracted standard info from prmon json
[2025-10-12 09:29:56] 2025-10-12 13:28:43,077 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:29:56] 2025-10-12 13:28:43,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:29:56] 2025-10-12 13:28:43,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:29:56] 2025-10-12 13:28:43,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:29:56] 2025-10-12 13:28:43,081 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | sum of square deviations: 101844260.86956538
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | sum of deviations: -518560089.13043475
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | mean x: 1760273444.0434783
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | mean y: 2504216.7101449277
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | -- intersect: 8965282739.95143
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | intersect: 8965282739.95143
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | chi2: 0.0019981460549413467
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | -- intersect: 8965282739.95143
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | current memory leak: -5.09 B/s (using 69 data points, chi2=0.00)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,082 | INFO     | could have reported an average CPU frequency of 3726 MHz (6 samples)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | ..............................
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . Timing measurements:
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . get job = 0 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . initial setup = 2 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . payload setup = 5 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . stage-in = 0 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . payload execution = 4623 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . stage-out = 1 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | . log creation = 0 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,083 | INFO     | ..............................
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | 
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | job summary report
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | --------------------------------------------------
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | PanDA job id: 6839866161
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | task id: 46676269
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | errors: (none)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | pilot state: finished 
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | transexitcode: 0
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | exeerrorcode: 0
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | exeerrordiag: 
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | exitcode: 0
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | exitmsg: OK
[2025-10-12 09:29:56] 2025-10-12 13:28:43,497 | INFO     | cpuconsumptiontime: 23584 s
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | nevents: 400
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | neventsw: 0
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | pid: 1649056
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | pgrp: 1649056
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | corecount: 8
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | event service: False
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | sizes: {0: 2348629, 1: 2348884, 5: 2349146, 11: 2349202, 4633: 2375487, 4635: 2384669, 4669: 2384807}
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | --------------------------------------------------
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | 
[2025-10-12 09:29:56] 2025-10-12 13:28:43,498 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 09:29:56] 2025-10-12 13:28:43,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | job 6839866161 has completed (purged errors)
[2025-10-12 09:29:56] 2025-10-12 13:28:43,684 | INFO     | overall cleanup function is called
[2025-10-12 09:29:56] 2025-10-12 13:28:44,696 | INFO     | --- collectZombieJob: --- 10, [1649056]
[2025-10-12 09:29:56] 2025-10-12 13:28:44,696 | INFO     | zombie collector waiting for pid 1649056
[2025-10-12 09:29:56] 2025-10-12 13:28:44,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:29:56] 2025-10-12 13:28:44,696 | INFO     | collected zombie processes
[2025-10-12 09:29:56] 2025-10-12 13:28:44,696 | INFO     | will attempt to kill all subprocesses of pid=1649056
[2025-10-12 09:29:56] 2025-10-12 13:28:46,722 | INFO     | PID=1636111 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:29:56] 2025-10-12 13:28:46,722 | INFO     | .. there are 31 such processes running
[2025-10-12 09:29:56] 2025-10-12 13:28:47,218 | INFO     | process IDs to be killed: [1649056] (in reverse order)
[2025-10-12 09:29:56] 2025-10-12 13:28:48,042 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:29:56] 2025-10-12 13:28:48,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:29:56] 2025-10-12 13:28:48,068 | INFO     | did not find any defunct processes belonging to 1649056
[2025-10-12 09:29:56] 2025-10-12 13:28:48,093 | INFO     | did not find any defunct processes belonging to 1649056
[2025-10-12 09:29:56] 2025-10-12 13:28:48,094 | INFO     | ready for new job
[2025-10-12 09:29:56] 2025-10-12 13:28:48,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:29:56] 2025-10-12 13:28:48,095 | INFO     | ***************************************
[2025-10-12 09:29:56] 2025-10-12 13:28:48,096 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:29:56] 2025-10-12 13:28:48,096 | INFO     | ***************************************
[2025-10-12 09:29:56] 2025-10-12 13:28:48,096 | INFO     | 
[2025-10-12 09:29:56] 2025-10-12 13:28:48,101 | INFO     | architecture information:
[2025-10-12 09:29:56] 2025-10-12 13:28:48,102 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:29:56] 2025-10-12 13:28:48,173 | INFO     | cat /etc/os-release:
[2025-10-12 09:29:56] NAME="CentOS Linux"
[2025-10-12 09:29:56] VERSION="7 (Core)"
[2025-10-12 09:29:56] ID="centos"
[2025-10-12 09:29:56] ID_LIKE="rhel fedora"
[2025-10-12 09:29:56] VERSION_ID="7"
[2025-10-12 09:29:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:29:56] ANSI_COLOR="0;31"
[2025-10-12 09:29:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:29:56] HOME_URL="https://www.centos.org/"
[2025-10-12 09:29:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:29:56] 
[2025-10-12 09:29:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:29:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:29:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:29:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:29:56] 
[2025-10-12 09:29:56] 2025-10-12 13:28:48,173 | INFO     | ***************************************
[2025-10-12 09:29:56] 2025-10-12 13:28:48,677 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 09:29:56] 2025-10-12 13:28:48,801 | INFO     | sufficient remaining disk space (169708879872 B)
[2025-10-12 09:29:56] 2025-10-12 13:28:48,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:29:56] 2025-10-12 13:28:48,802 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:29:56] 2025-10-12 13:28:48,802 | INFO     | update_server=False
[2025-10-12 09:29:56] 2025-10-12 13:28:48,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:29:56] 2025-10-12 13:28:48,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:29:56] 2025-10-12 13:28:48,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:29:56] 2025-10-12 13:28:48,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:29:56] 2025-10-12 13:28:49,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:29:56] 2025-10-12 13:28:49,167 | INFO     | aborting loop
[2025-10-12 09:29:56] 2025-10-12 13:28:49,234 | INFO     | all job control threads have been joined
[2025-10-12 09:29:56] 2025-10-12 13:28:49,736 | INFO     | all payload control threads have been joined
[2025-10-12 09:29:56] 2025-10-12 13:28:49,808 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:49,810 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:49,915 | INFO     | all data control threads have been joined
[2025-10-12 09:29:56] 2025-10-12 13:28:50,080 | INFO     | [job] validate thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,135 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,139 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,143 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,173 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,240 | INFO     | [job] control thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,265 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,742 | INFO     | [payload] control thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,812 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:50,921 | INFO     | [data] control thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:51,183 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:51,309 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:28:52,817 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:29:56] 2025-10-12 13:29:21,679 | INFO     | PID=1636111 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:29:56] 2025-10-12 13:29:21,679 | INFO     | .. there are 31 such processes running
[2025-10-12 09:29:56] 2025-10-12 13:29:21,680 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:29:56] 2025-10-12 13:29:21,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:29:56] 2025-10-12 13:29:21,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:29:56] 2025-10-12 13:29:47,199 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:29:56] 2025-10-12 13:29:48,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765753300800)>', '<ExcThread(monitor, started 139764812478208)>']
[2025-10-12 09:29:56] 2025-10-12 13:29:48,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:29:56] 2025-10-12 13:29:48,862 | INFO     | [monitor] control thread has ended
[2025-10-12 09:29:56] 2025-10-12 13:29:53,513 | INFO     | all workflow threads have been joined
[2025-10-12 09:29:56] 2025-10-12 13:29:53,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:29:56] 2025-10-12 13:29:53,513 | INFO     | traces error code: 0
[2025-10-12 09:29:56] 2025-10-12 13:29:53,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:29:56] 2025-10-12 13:29:55,378 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:29:56] 2025-10-12 13:29:55,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:29:56] 2025-10-12 13:29:55,418 [wrapper] pilotpid: 1636111
[2025-10-12 09:29:56] 2025-10-12 13:29:55,440 [wrapper] Pilot exit status: 0
[2025-10-12 09:29:56] 2025-10-12 13:29:55,564 [wrapper] pandaids: 6839866161
[2025-10-12 09:29:56] 2025-10-12 13:29:55,951 [wrapper] cleanup supervisor_pilot 2070909 1636112
[2025-10-12 09:29:56] 2025-10-12 13:29:55,975 [wrapper] Test setup, not cleaning
[2025-10-12 09:29:56] 2025-10-12 13:29:56,005 [wrapper] apfmon messages muted
[2025-10-12 09:29:56] 2025-10-12 13:29:56,030 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:29:56] 2025-10-12 13:29:56,036 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:29:56]  *** Error codes and diagnostics ***
[2025-10-12 09:29:56]     "exeErrorCode": 0,
[2025-10-12 09:29:56]     "exeErrorDiag": "",
[2025-10-12 09:29:56]     "pilotErrorCode": 0,
[2025-10-12 09:29:56]     "pilotErrorDiag": "",
[2025-10-12 09:29:56]  *** Listing of results directory ***
[2025-10-12 09:29:56] total 405096
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:10 queuedata.json
[2025-10-12 09:29:56] -rwx------. 1 boincer umatlas     36292 Oct 12 06:11 runpilot2-wrapper.sh
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:29:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:10 run_atlas
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:10 job.xml
[2025-10-12 09:29:56] -rw-r--r--. 2 boincer umatlas 220393441 Oct 12 08:10 EVNT.46676267._003611.pool.root.1
[2025-10-12 09:29:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:10 start_atlas.sh
[2025-10-12 09:29:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:10 shared
[2025-10-12 09:29:56] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 08:10 input.tar.gz
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:10 boinc_lockfile
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 08:10 pandaJob.out
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas    975520 Oct 12 08:10 agis_schedconf.cvmfs.json
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:29:56] drwx------. 5 boincer umatlas      4096 Oct 12 08:10 pilot3
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 09:22 init_data.xml
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas 188632397 Oct 12 09:27 HITS.46676269._075879.pool.root.1
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas       529 Oct 12 09:27 boinc_task_state.xml
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas      1047 Oct 12 09:28 memory_monitor_summary.json
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas    328047 Oct 12 09:28 log.46676269._075879.job.log.tgz.1
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas      7800 Oct 12 09:28 heartbeat.json
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas        95 Oct 12 09:29 pilot_heartbeat.json
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:29 boinc_mmap_file
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas      4825 Oct 12 09:29 pilotlog.txt
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas        27 Oct 12 09:29 wrapper_checkpoint.txt
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas    630284 Oct 12 09:29 log.46676269._075879.job.log.1
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas       357 Oct 12 09:29 output.list
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:29 runtime_log
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas    972800 Oct 12 09:29 result.tar.gz
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 09:29 runtime_log.err
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas       657 Oct 12 09:29 3N1MDm9D8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2cTMDmJ1uVPo.diag
[2025-10-12 09:29:56] -rw-r--r--. 1 boincer umatlas      2143 Oct 12 09:29 stderr.txt
[2025-10-12 09:29:56] HITS file was successfully produced:
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas 188632397 Oct 12 09:27 shared/HITS.pool.root.1
[2025-10-12 09:29:56]  *** Contents of shared directory: ***
[2025-10-12 09:29:56] total 400972
[2025-10-12 09:29:56] -rw-r--r--. 2 boincer umatlas 220393441 Oct 12 08:10 ATLAS.root_0
[2025-10-12 09:29:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:10 start_atlas.sh
[2025-10-12 09:29:56] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 08:10 input.tar.gz
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas 188632397 Oct 12 09:27 HITS.pool.root.1
[2025-10-12 09:29:56] -rw-------. 1 boincer umatlas    972800 Oct 12 09:29 result.tar.gz
09:29:58 (1628012): run_atlas exited; CPU time 23711.311793
09:29:58 (1628012): called boinc_finish(0)

</stderr_txt>
]]>

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