Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:18:50 (3800639): wrapper (7.7.26015): starting
10:18:50 (3800639): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 10:18:50] Arguments: --nthreads 11
[2025-10-12 10:18:50] Threads: 11
[2025-10-12 10:18:50] Checking for CVMFS
[2025-10-12 10:18:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:18:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:18:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:18:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:18:51] 2.13.2.0 2163181 7191 224940 151623 3 176 37773088 40960000 19394 16776704 0 21433001 99.735 15004221 21295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 10:18:51] CVMFS is ok
[2025-10-12 10:18:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:18:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:18:51] Further information can be found at the LHC@home message board.
[2025-10-12 10:18:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:18:51] Checking for apptainer binary...
[2025-10-12 10:18:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:18:51] Running /usr/bin/apptainer --version
[2025-10-12 10:18:51] apptainer version 1.4.3-1.el9
[2025-10-12 10:18:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:18:51] c7-10-12.aglt2.org
[2025-10-12 10:18:51] apptainer works
[2025-10-12 10:18:51] Set ATHENA_PROC_NUMBER=11
[2025-10-12 10:18:51] Set ATHENA_CORE_NUMBER=11
[2025-10-12 10:18:51] Starting ATLAS job with PandaID=6839637106
[2025-10-12 10:18:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:51:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:51:31] 2025-10-12 17:50:46,905 | INFO     | monitor loop #813: job 0:6839637106 is in state 'finished'
[2025-10-12 13:51:31] 2025-10-12 17:50:46,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,403 | INFO     | time since job start (12704s) is within the limit (172800.0s)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,542 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:51:31] 2025-10-12 17:50:47,547 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3227.1332968750007
[2025-10-12 13:51:31] 2025-10-12 17:50:47,559 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839637106/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,560 | INFO     | extracted standard info from prmon json
[2025-10-12 13:51:31] 2025-10-12 17:50:47,560 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:51:31] 2025-10-12 17:50:47,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:51:31] 2025-10-12 17:50:47,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:51:31] 2025-10-12 17:50:47,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:51:31] 2025-10-12 17:50:47,563 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:51:31] 2025-10-12 17:50:47,563 | INFO     | sum of square deviations: 2790500337.456734
[2025-10-12 13:51:31] 2025-10-12 17:50:47,564 | INFO     | sum of deviations: -8145183130.644221
[2025-10-12 13:51:31] 2025-10-12 17:50:47,565 | INFO     | mean x: 1760285084.2355769
[2025-10-12 13:51:31] 2025-10-12 17:50:47,565 | INFO     | mean y: 2267343.951923077
[2025-10-12 13:51:31] 2025-10-12 17:50:47,565 | INFO     | -- intersect: 5140358237.826458
[2025-10-12 13:51:31] 2025-10-12 17:50:47,565 | INFO     | intersect: 5140358237.826458
[2025-10-12 13:51:31] 2025-10-12 17:50:47,565 | INFO     | chi2: 1.295764387611384
[2025-10-12 13:51:31] 2025-10-12 17:50:47,565 | INFO     | sum of square deviations: 2594077467.1625714
[2025-10-12 13:51:31] 2025-10-12 17:50:47,566 | INFO     | sum of deviations: -5250035033.645322
[2025-10-12 13:51:31] 2025-10-12 17:50:47,566 | INFO     | mean x: 1760284931.7389162
[2025-10-12 13:51:31] 2025-10-12 17:50:47,566 | INFO     | mean y: 2269592.157635468
[2025-10-12 13:51:31] 2025-10-12 17:50:47,567 | INFO     | -- intersect: 3564829954.2950797
[2025-10-12 13:51:31] 2025-10-12 17:50:47,567 | INFO     | intersect: 3564829954.2950797
[2025-10-12 13:51:31] 2025-10-12 17:50:47,567 | INFO     | chi2: 1.288583167428047
[2025-10-12 13:51:31] 2025-10-12 17:50:47,567 | INFO     | current chi2=1.288583167428047 (change=0.5542072503300453 %)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,567 | INFO     | right removable region: 202
[2025-10-12 13:51:31] 2025-10-12 17:50:47,567 | INFO     | sum of square deviations: 2594022079.684721
[2025-10-12 13:51:31] 2025-10-12 17:50:47,568 | INFO     | sum of deviations: -31321405301.60593
[2025-10-12 13:51:31] 2025-10-12 17:50:47,568 | INFO     | mean x: 1760285236.7536945
[2025-10-12 13:51:31] 2025-10-12 17:50:47,568 | INFO     | mean y: 2285123.8078817734
[2025-10-12 13:51:31] 2025-10-12 17:50:47,568 | INFO     | -- intersect: 21256771652.1172
[2025-10-12 13:51:31] 2025-10-12 17:50:47,569 | INFO     | intersect: 21256771652.1172
[2025-10-12 13:51:31] 2025-10-12 17:50:47,569 | INFO     | chi2: 0.12283259080789198
[2025-10-12 13:51:31] 2025-10-12 17:50:47,569 | INFO     | current chi2=0.12283259080789198 (change=90.52045325660463 %)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,569 | INFO     | sum of square deviations: 2406985859.2727265
[2025-10-12 13:51:31] 2025-10-12 17:50:47,570 | INFO     | sum of deviations: -27902772233.999966
[2025-10-12 13:51:31] 2025-10-12 17:50:47,570 | INFO     | mean x: 1760285389.2727273
[2025-10-12 13:51:31] 2025-10-12 17:50:47,570 | INFO     | mean y: 2282328.5555555555
[2025-10-12 13:51:31] 2025-10-12 17:50:47,570 | INFO     | -- intersect: 20408236146.063892
[2025-10-12 13:51:31] 2025-10-12 17:50:47,570 | INFO     | intersect: 20408236146.063892
[2025-10-12 13:51:31] 2025-10-12 17:50:47,570 | INFO     | chi2: 0.12059275398098236
[2025-10-12 13:51:31] 2025-10-12 17:50:47,571 | INFO     | current chi2=0.12059275398098236 (change=1.823487408494611 %)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,571 | INFO     | left removable region: 20
[2025-10-12 13:51:31] 2025-10-12 17:50:47,571 | INFO     | sum of square deviations: 1869324284.7692373
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | sum of deviations: -15523491666.384613
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | mean x: 1760285511.3076923
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | mean y: 2277020.2032967033
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | -- intersect: 14620274383.146574
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | intersect: 14620274383.146574
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | chi2: 0.09336017625307173
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | -- intersect: 14620274383.146574
[2025-10-12 13:51:31] 2025-10-12 17:50:47,572 | INFO     | current memory leak: -8.30 B/s (using 182 data points, chi2=0.09)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | could have reported an average CPU frequency of 3216 MHz (10 samples)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | ..............................
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . Timing measurements:
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . get job = 0 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . initial setup = 2 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . payload setup = 5 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . stage-in = 0 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . payload execution = 12661 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . stage-out = 2 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | . log creation = 0 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,573 | INFO     | ..............................
[2025-10-12 13:51:31] 2025-10-12 17:50:47,706 | INFO     | 
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | job summary report
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | --------------------------------------------------
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | PanDA job id: 6839637106
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | task id: 46676269
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | errors: (none)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | pilot state: finished 
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | transexitcode: 0
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | exeerrorcode: 0
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | exeerrordiag: 
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | exitcode: 0
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | exitmsg: OK
[2025-10-12 13:51:31] 2025-10-12 17:50:47,707 | INFO     | cpuconsumptiontime: 34050 s
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | nevents: 400
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | neventsw: 0
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | pid: 3812601
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | pgrp: 3812601
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | corecount: 11
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | event service: False
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | sizes: {0: 2348743, 1: 2348885, 5: 2349147, 11: 2349203, 12671: 2379280, 12675: 2388278, 12676: 2388462, 12689: 2388656}
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | --------------------------------------------------
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | 
[2025-10-12 13:51:31] 2025-10-12 17:50:47,708 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:51:31] 2025-10-12 17:50:47,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,743 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,743 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,743 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:51:31] 2025-10-12 17:50:47,743 | INFO     | job 6839637106 has completed (purged errors)
[2025-10-12 13:51:31] 2025-10-12 17:50:47,743 | INFO     | overall cleanup function is called
[2025-10-12 13:51:31] 2025-10-12 17:50:48,753 | INFO     | --- collectZombieJob: --- 10, [3812601]
[2025-10-12 13:51:31] 2025-10-12 17:50:48,753 | INFO     | zombie collector waiting for pid 3812601
[2025-10-12 13:51:31] 2025-10-12 17:50:48,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:51:31] 2025-10-12 17:50:48,753 | INFO     | collected zombie processes
[2025-10-12 13:51:31] 2025-10-12 17:50:48,753 | INFO     | will attempt to kill all subprocesses of pid=3812601
[2025-10-12 13:51:31] 2025-10-12 17:50:49,208 | INFO     | process IDs to be killed: [3812601] (in reverse order)
[2025-10-12 13:51:31] 2025-10-12 17:50:49,345 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:51:31] 2025-10-12 17:50:49,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:51:31] 2025-10-12 17:50:49,361 | INFO     | did not find any defunct processes belonging to 3812601
[2025-10-12 13:51:31] 2025-10-12 17:50:49,378 | INFO     | did not find any defunct processes belonging to 3812601
[2025-10-12 13:51:31] 2025-10-12 17:50:49,378 | INFO     | ready for new job
[2025-10-12 13:51:31] 2025-10-12 17:50:49,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:51:31] 2025-10-12 17:50:49,380 | INFO     | ***************************************
[2025-10-12 13:51:31] 2025-10-12 17:50:49,380 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:51:31] 2025-10-12 17:50:49,380 | INFO     | ***************************************
[2025-10-12 13:51:31] 2025-10-12 17:50:49,380 | INFO     | 
[2025-10-12 13:51:31] 2025-10-12 17:50:49,397 | INFO     | architecture information:
[2025-10-12 13:51:31] 2025-10-12 17:50:49,398 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:51:31] 2025-10-12 17:50:49,424 | INFO     | cat /etc/os-release:
[2025-10-12 13:51:31] NAME="CentOS Linux"
[2025-10-12 13:51:31] VERSION="7 (Core)"
[2025-10-12 13:51:31] ID="centos"
[2025-10-12 13:51:31] ID_LIKE="rhel fedora"
[2025-10-12 13:51:31] VERSION_ID="7"
[2025-10-12 13:51:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:51:31] ANSI_COLOR="0;31"
[2025-10-12 13:51:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:51:31] HOME_URL="https://www.centos.org/"
[2025-10-12 13:51:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:51:31] 
[2025-10-12 13:51:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:51:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:51:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:51:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:51:31] 
[2025-10-12 13:51:31] 2025-10-12 17:50:49,424 | INFO     | ***************************************
[2025-10-12 13:51:31] 2025-10-12 17:50:49,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:51:31] 2025-10-12 17:50:50,065 | INFO     | sufficient remaining disk space (83710967808 B)
[2025-10-12 13:51:31] 2025-10-12 17:50:50,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:51:31] 2025-10-12 17:50:50,066 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:51:31] 2025-10-12 17:50:50,066 | INFO     | update_server=False
[2025-10-12 13:51:31] 2025-10-12 17:50:50,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:51:31] 2025-10-12 17:50:50,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:51:31] 2025-10-12 17:50:50,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:51:31] 2025-10-12 17:50:50,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:51:31] 2025-10-12 17:50:50,420 | INFO     | aborting loop
[2025-10-12 13:51:31] 2025-10-12 17:50:50,463 | INFO     | all data control threads have been joined
[2025-10-12 13:51:31] 2025-10-12 17:50:50,580 | INFO     | all job control threads have been joined
[2025-10-12 13:51:31] 2025-10-12 17:50:50,594 | INFO     | all payload control threads have been joined
[2025-10-12 13:51:31] 2025-10-12 17:50:51,071 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,226 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,426 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,472 | INFO     | [data] control thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,516 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,586 | INFO     | [job] control thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,600 | INFO     | [payload] control thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,750 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:51,823 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:52,076 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:52,315 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:52,320 | INFO     | [job] validate thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:52,336 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:52,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:51:31] 2025-10-12 17:50:53,728 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:50:54,098 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:51:31] 2025-10-12 17:51:20,965 | INFO     | PID=3804858 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:51:31] 2025-10-12 17:51:20,965 | INFO     | .. there are 29 such processes running
[2025-10-12 13:51:31] 2025-10-12 17:51:20,966 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:51:31] 2025-10-12 17:51:20,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:51:31] 2025-10-12 17:51:20,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:51:31] 2025-10-12 17:51:24,947 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:51:31] 2025-10-12 17:51:25,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461343778624)>', '<ExcThread(monitor, started 140460706219776)>']
[2025-10-12 13:51:31] 2025-10-12 17:51:25,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:51:31] 2025-10-12 17:51:25,997 | INFO     | [monitor] control thread has ended
[2025-10-12 13:51:31] 2025-10-12 17:51:30,446 | INFO     | all workflow threads have been joined
[2025-10-12 13:51:31] 2025-10-12 17:51:30,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:51:31] 2025-10-12 17:51:30,446 | INFO     | traces error code: 0
[2025-10-12 13:51:31] 2025-10-12 17:51:30,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:51:31] 2025-10-12 17:51:30,617 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:51:31] 2025-10-12 17:51:30,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:51:31] 2025-10-12 17:51:30,622 [wrapper] pilotpid: 3804858
[2025-10-12 13:51:31] 2025-10-12 17:51:30,629 [wrapper] Pilot exit status: 0
[2025-10-12 13:51:31] 2025-10-12 17:51:30,654 [wrapper] pandaids: 6839637106
[2025-10-12 13:51:31] 2025-10-12 17:51:30,809 [wrapper] cleanup supervisor_pilot  587119 3804859
[2025-10-12 13:51:31] 2025-10-12 17:51:30,841 [wrapper] Test setup, not cleaning
[2025-10-12 13:51:31] 2025-10-12 17:51:30,883 [wrapper] apfmon messages muted
[2025-10-12 13:51:31] 2025-10-12 17:51:30,922 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:51:31] 2025-10-12 17:51:30,961 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:51:31]  *** Error codes and diagnostics ***
[2025-10-12 13:51:31]     "exeErrorCode": 0,
[2025-10-12 13:51:31]     "exeErrorDiag": "",
[2025-10-12 13:51:31]     "pilotErrorCode": 0,
[2025-10-12 13:51:31]     "pilotErrorDiag": "",
[2025-10-12 13:51:31]  *** Listing of results directory ***
[2025-10-12 13:51:31] total 419816
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 13:51:31] -rwx------. 1 boincer umatlas     36292 Oct 12 03:11 runpilot2-wrapper.sh
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 03:11 queuedata.json
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:51:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:18 run_atlas
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:18 job.xml
[2025-10-12 13:51:31] -rw-r--r--. 2 boincer umatlas 223014733 Oct 12 10:18 EVNT.46676267._003494.pool.root.1
[2025-10-12 13:51:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:18 start_atlas.sh
[2025-10-12 13:51:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:18 shared
[2025-10-12 13:51:31] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 10:18 input.tar.gz
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:18 boinc_lockfile
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 10:18 pandaJob.out
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas    975528 Oct 12 10:19 agis_schedconf.cvmfs.json
[2025-10-12 13:51:31] drwx------. 5 boincer umatlas      4096 Oct 12 10:19 pilot3
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas      6898 Oct 12 13:47 init_data.xml
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas 198671184 Oct 12 13:49 HITS.46676269._073364.pool.root.1
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas       530 Oct 12 13:49 boinc_task_state.xml
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas      1033 Oct 12 13:50 memory_monitor_summary.json
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas    490011 Oct 12 13:50 log.46676269._073364.job.log.tgz.1
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas      7781 Oct 12 13:50 heartbeat.json
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas        95 Oct 12 13:51 pilot_heartbeat.json
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:51 boinc_mmap_file
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas        28 Oct 12 13:51 wrapper_checkpoint.txt
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas      4824 Oct 12 13:51 pilotlog.txt
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas   1662856 Oct 12 13:51 log.46676269._073364.job.log.1
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas       357 Oct 12 13:51 output.list
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:51 runtime_log
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas   2170880 Oct 12 13:51 result.tar.gz
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 13:51 runtime_log.err
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas       655 Oct 12 13:51 98GMDmuP5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHziNDmzYDXHm.diag
[2025-10-12 13:51:31] -rw-r--r--. 1 boincer umatlas     21218 Oct 12 13:51 stderr.txt
[2025-10-12 13:51:31] HITS file was successfully produced:
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas 198671184 Oct 12 13:49 shared/HITS.pool.root.1
[2025-10-12 13:51:31]  *** Contents of shared directory: ***
[2025-10-12 13:51:31] total 414508
[2025-10-12 13:51:31] -rw-r--r--. 2 boincer umatlas 223014733 Oct 12 10:18 ATLAS.root_0
[2025-10-12 13:51:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:18 start_atlas.sh
[2025-10-12 13:51:31] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 10:18 input.tar.gz
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas 198671184 Oct 12 13:49 HITS.pool.root.1
[2025-10-12 13:51:31] -rw-------. 1 boincer umatlas   2170880 Oct 12 13:51 result.tar.gz
13:51:53 (3800639): run_atlas exited; CPU time 34251.062205
13:51:53 (3800639): called boinc_finish(0)

</stderr_txt>
]]>

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