Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:14:08 (6023): wrapper (7.7.26015): starting
18:14:08 (6023): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:14:08] Arguments: --nthreads 8
[2025-10-12 18:14:08] Threads: 8
[2025-10-12 18:14:08] Checking for CVMFS
[2025-10-12 18:14:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:14:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:14:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:14:10] 2.11.2.0 12000 157956 139644 151625 3 61 22505439 25165825 4632 130560 0 90163273 99.922 29612773 3678 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 18:14:10] CVMFS is ok
[2025-10-12 18:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:14:10] Checking for apptainer binary...
[2025-10-12 18:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:14:10] Running /usr/bin/apptainer --version
[2025-10-12 18:14:10] apptainer version 1.3.2-1.el7
[2025-10-12 18:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:14:22] cg-vwn246.simple-grid.lan
[2025-10-12 18:14:22] apptainer works
[2025-10-12 18:14:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:14:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:14:23] Starting ATLAS job with PandaID=6839866037
[2025-10-12 18:14:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:33:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:33:05] 2025-10-12 20:32:29,608 | INFO     | sum of square deviations: 4127772278.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,610 | INFO     | sum of deviations: 94791040768.00002
[2025-10-12 22:33:05] 2025-10-12 20:32:29,610 | INFO     | mean x: 1760293552.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,610 | INFO     | mean y: 2447263.405063291
[2025-10-12 22:33:05] 2025-10-12 20:32:29,610 | INFO     | -- intersect: -40421308363.95892
[2025-10-12 22:33:05] 2025-10-12 20:32:29,610 | INFO     | intersect: -40421308363.95892
[2025-10-12 22:33:05] 2025-10-12 20:32:29,611 | INFO     | chi2: 4.385768638020941
[2025-10-12 22:33:05] 2025-10-12 20:32:29,611 | INFO     | current chi2=4.385768638020941 (change=-0.1023634436789454 %)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,611 | INFO     | right removable region: 236
[2025-10-12 22:33:05] 2025-10-12 20:32:29,611 | INFO     | sum of square deviations: 4127772278.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,613 | INFO     | sum of deviations: 20204493749.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,613 | INFO     | mean x: 1760293857.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,613 | INFO     | mean y: 2492352.05907173
[2025-10-12 22:33:05] 2025-10-12 20:32:29,614 | INFO     | -- intersect: -8613740287.448856
[2025-10-12 22:33:05] 2025-10-12 20:32:29,614 | INFO     | intersect: -8613740287.448856
[2025-10-12 22:33:05] 2025-10-12 20:32:29,614 | INFO     | chi2: 0.4142324706717353
[2025-10-12 22:33:05] 2025-10-12 20:32:29,614 | INFO     | current chi2=0.4142324706717353 (change=90.54540885493077 %)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,615 | INFO     | sum of square deviations: 3871990738.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,617 | INFO     | sum of deviations: -378100021.0000019
[2025-10-12 22:33:05] 2025-10-12 20:32:29,617 | INFO     | mean x: 1760294009.5
[2025-10-12 22:33:05] 2025-10-12 20:32:29,617 | INFO     | mean y: 2504549.4655172415
[2025-10-12 22:33:05] 2025-10-12 20:32:29,617 | INFO     | -- intersect: 174397316.51844496
[2025-10-12 22:33:05] 2025-10-12 20:32:29,617 | INFO     | intersect: 174397316.51844496
[2025-10-12 22:33:05] 2025-10-12 20:32:29,617 | INFO     | chi2: 0.046477235932653
[2025-10-12 22:33:05] 2025-10-12 20:32:29,618 | INFO     | current chi2=0.046477235932653 (change=88.77991484895335 %)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,618 | INFO     | sum of square deviations: 3627000098.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,620 | INFO     | sum of deviations: -5312516046.999998
[2025-10-12 22:33:05] 2025-10-12 20:32:29,620 | INFO     | mean x: 1760294162.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,620 | INFO     | mean y: 2507586.898678414
[2025-10-12 22:33:05] 2025-10-12 20:32:29,620 | INFO     | -- intersect: 2580834228.858812
[2025-10-12 22:33:05] 2025-10-12 20:32:29,621 | INFO     | intersect: 2580834228.858812
[2025-10-12 22:33:05] 2025-10-12 20:32:29,621 | INFO     | chi2: 0.013006361627758698
[2025-10-12 22:33:05] 2025-10-12 20:32:29,621 | INFO     | current chi2=0.013006361627758698 (change=72.01563008909278 %)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,621 | INFO     | sum of square deviations: 3392567795.5
[2025-10-12 22:33:05] 2025-10-12 20:32:29,623 | INFO     | sum of deviations: -4831616202.999999
[2025-10-12 22:33:05] 2025-10-12 20:32:29,623 | INFO     | mean x: 1760294314.5
[2025-10-12 22:33:05] 2025-10-12 20:32:29,623 | INFO     | mean y: 2507271.045045045
[2025-10-12 22:33:05] 2025-10-12 20:32:29,624 | INFO     | -- intersect: 2509477520.3259416
[2025-10-12 22:33:05] 2025-10-12 20:32:29,624 | INFO     | intersect: 2509477520.3259416
[2025-10-12 22:33:05] 2025-10-12 20:32:29,624 | INFO     | chi2: 0.012898413038728022
[2025-10-12 22:33:05] 2025-10-12 20:32:29,624 | INFO     | current chi2=0.012898413038728022 (change=0.8299676121590263 %)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,624 | INFO     | left removable region: 40
[2025-10-12 22:33:05] 2025-10-12 20:32:29,625 | INFO     | sum of square deviations: 2334722845.0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,626 | INFO     | sum of deviations: 1019521212.4999998
[2025-10-12 22:33:05] 2025-10-12 20:32:29,627 | INFO     | mean x: 1760294741.5
[2025-10-12 22:33:05] 2025-10-12 20:32:29,627 | INFO     | mean y: 2502623.964285714
[2025-10-12 22:33:05] 2025-10-12 20:32:29,627 | INFO     | -- intersect: -766178692.1306247
[2025-10-12 22:33:05] 2025-10-12 20:32:29,627 | INFO     | intersect: -766178692.1306247
[2025-10-12 22:33:05] 2025-10-12 20:32:29,627 | INFO     | chi2: 0.0067246640877952285
[2025-10-12 22:33:05] 2025-10-12 20:32:29,627 | INFO     | -- intersect: -766178692.1306247
[2025-10-12 22:33:05] 2025-10-12 20:32:29,628 | INFO     | current memory leak: 0.44 B/s (using 196 data points, chi2=0.01)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,628 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,628 | INFO     | ..............................
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . Timing measurements:
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . get job = 0 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . initial setup = 13 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . payload setup = 118 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . stage-in = 0 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . payload execution = 14907 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . stage-out = 2 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | . log creation = 0 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,629 | INFO     | ..............................
[2025-10-12 22:33:05] 2025-10-12 20:32:29,829 | INFO     | 
[2025-10-12 22:33:05] 2025-10-12 20:32:29,829 | INFO     | job summary report
[2025-10-12 22:33:05] 2025-10-12 20:32:29,829 | INFO     | --------------------------------------------------
[2025-10-12 22:33:05] 2025-10-12 20:32:29,829 | INFO     | PanDA job id: 6839866037
[2025-10-12 22:33:05] 2025-10-12 20:32:29,829 | INFO     | task id: 46676269
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | errors: (none)
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | pilot state: finished 
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | transexitcode: 0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | exeerrorcode: 0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | exeerrordiag: 
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | exitcode: 0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | exitmsg: OK
[2025-10-12 22:33:05] 2025-10-12 20:32:29,830 | INFO     | cpuconsumptiontime: 56097 s
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | nevents: 400
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | neventsw: 0
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | pid: 16407
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | pgrp: 16407
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | corecount: 8
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | event service: False
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 12: 2348913, 23: 2348941, 34: 2348969, 45: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 87: 2349265, 93: 2349835, 98
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | --------------------------------------------------
[2025-10-12 22:33:05] 2025-10-12 20:32:29,831 | INFO     | 
[2025-10-12 22:33:05] 2025-10-12 20:32:29,832 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-12 22:33:05] 2025-10-12 20:32:30,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:33:05] 2025-10-12 20:32:30,326 | INFO     | job 6839866037 has completed (purged errors)
[2025-10-12 22:33:05] 2025-10-12 20:32:30,327 | INFO     | overall cleanup function is called
[2025-10-12 22:33:05] 2025-10-12 20:32:31,336 | INFO     | --- collectZombieJob: --- 10, [16407]
[2025-10-12 22:33:05] 2025-10-12 20:32:31,336 | INFO     | zombie collector waiting for pid 16407
[2025-10-12 22:33:05] 2025-10-12 20:32:31,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:33:05] 2025-10-12 20:32:31,336 | INFO     | collected zombie processes
[2025-10-12 22:33:05] 2025-10-12 20:32:31,337 | INFO     | will attempt to kill all subprocesses of pid=16407
[2025-10-12 22:33:05] 2025-10-12 20:32:31,482 | INFO     | process IDs to be killed: [16407] (in reverse order)
[2025-10-12 22:33:05] 2025-10-12 20:32:32,087 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:33:05] 2025-10-12 20:32:32,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:33:05] 2025-10-12 20:32:32,091 | INFO     | did not find any defunct processes belonging to 16407
[2025-10-12 22:33:05] 2025-10-12 20:32:32,094 | INFO     | did not find any defunct processes belonging to 16407
[2025-10-12 22:33:05] 2025-10-12 20:32:32,094 | INFO     | ready for new job
[2025-10-12 22:33:05] 2025-10-12 20:32:32,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:33:05] 2025-10-12 20:32:32,097 | INFO     | ***************************************
[2025-10-12 22:33:05] 2025-10-12 20:32:32,097 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:33:05] 2025-10-12 20:32:32,097 | INFO     | ***************************************
[2025-10-12 22:33:05] 2025-10-12 20:32:32,097 | INFO     | 
[2025-10-12 22:33:05] 2025-10-12 20:32:32,098 | INFO     | pilot is running in a VM
[2025-10-12 22:33:05] 2025-10-12 20:32:32,098 | INFO     | architecture information:
[2025-10-12 22:33:05] 2025-10-12 20:32:32,111 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:33:05] 2025-10-12 20:32:32,275 | INFO     | cat /etc/os-release:
[2025-10-12 22:33:05] NAME="CentOS Linux"
[2025-10-12 22:33:05] VERSION="7 (Core)"
[2025-10-12 22:33:05] ID="centos"
[2025-10-12 22:33:05] ID_LIKE="rhel fedora"
[2025-10-12 22:33:05] VERSION_ID="7"
[2025-10-12 22:33:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:33:05] ANSI_COLOR="0;31"
[2025-10-12 22:33:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:33:05] HOME_URL="https://www.centos.org/"
[2025-10-12 22:33:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:33:05] 
[2025-10-12 22:33:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:33:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:33:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:33:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:33:05] 
[2025-10-12 22:33:05] 2025-10-12 20:32:32,276 | INFO     | ***************************************
[2025-10-12 22:33:05] 2025-10-12 20:32:32,778 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-12 22:33:05] 2025-10-12 20:32:32,938 | INFO     | sufficient remaining disk space (495876833280 B)
[2025-10-12 22:33:05] 2025-10-12 20:32:32,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:33:05] 2025-10-12 20:32:32,938 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:33:05] 2025-10-12 20:32:32,938 | INFO     | update_server=False
[2025-10-12 22:33:05] 2025-10-12 20:32:32,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:33:05] 2025-10-12 20:32:32,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:33:05] 2025-10-12 20:32:32,939 | INFO     | aborting loop
[2025-10-12 22:33:05] 2025-10-12 20:32:32,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:33:05] 2025-10-12 20:32:33,096 | INFO     | all data control threads have been joined
[2025-10-12 22:33:05] 2025-10-12 20:32:33,337 | INFO     | all payload control threads have been joined
[2025-10-12 22:33:05] 2025-10-12 20:32:33,731 | INFO     | all job control threads have been joined
[2025-10-12 22:33:05] 2025-10-12 20:32:33,944 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:33,945 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:33,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:33:05] 2025-10-12 20:32:33,980 | INFO     | [job] validate thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,064 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,104 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,105 | INFO     | [data] control thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,110 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,343 | INFO     | [payload] control thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,737 | INFO     | [job] control thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:33:05] 2025-10-12 20:32:34,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:34,952 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:35,240 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:35,254 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:35,771 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:37,986 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:33:05] 2025-10-12 20:32:38,140 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:33:05] 2025-10-12 20:32:39,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537978914624)>', '<ExcThread(monitor, started 140537520690944)>']
[2025-10-12 22:33:05] 2025-10-12 20:32:44,669 | INFO     | all workflow threads have been joined
[2025-10-12 22:33:05] 2025-10-12 20:32:44,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:33:05] 2025-10-12 20:32:44,669 | INFO     | traces error code: 0
[2025-10-12 22:33:05] 2025-10-12 20:32:44,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:33:05] 2025-10-12 20:33:00,071 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-10-12 22:33:05] 2025-10-12 20:33:01,918 | INFO     | PID=9808 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 22:33:05] 2025-10-12 20:33:01,918 | INFO     | .. there are 9 such processes running
[2025-10-12 22:33:05] 2025-10-12 20:33:01,918 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:33:05] 2025-10-12 20:33:01,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:33:05] 2025-10-12 20:33:01,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:33:05] 2025-10-12 20:33:01,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:33:05] 2025-10-12 20:33:01,919 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:33:05] 2025-10-12 20:33:01,919 | INFO     | [monitor] control thread has ended
[2025-10-12 22:33:05] 2025-10-12 20:33:02,226 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:33:05] 2025-10-12 20:33:02,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:33:05] 2025-10-12 20:33:02,320 [wrapper] pilotpid: 9808
[2025-10-12 22:33:05] 2025-10-12 20:33:02,421 [wrapper] Pilot exit status: 0
[2025-10-12 22:33:05] 2025-10-12 20:33:02,807 [wrapper] pandaids: 6839866037
[2025-10-12 22:33:05] 2025-10-12 20:33:03,625 [wrapper] cleanup supervisor_pilot 28469 9809
[2025-10-12 22:33:05] 2025-10-12 20:33:03,712 [wrapper] Test setup, not cleaning
[2025-10-12 22:33:05] 2025-10-12 20:33:03,837 [wrapper] apfmon messages muted
[2025-10-12 22:33:05] 2025-10-12 20:33:03,901 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:33:05] 2025-10-12 20:33:03,943 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:33:05]  *** Error codes and diagnostics ***
[2025-10-12 22:33:05]     "exeErrorCode": 0,
[2025-10-12 22:33:05]     "exeErrorDiag": "",
[2025-10-12 22:33:05]     "pilotErrorCode": 0,
[2025-10-12 22:33:05]     "pilotErrorDiag": "",
[2025-10-12 22:33:05]  *** Listing of results directory ***
[2025-10-12 22:33:05] total 413164
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-12 22:33:05] -rwx------. 1 boinc boinc     36292 Oct 12 12:08 runpilot2-wrapper.sh
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc      5112 Oct 12 12:08 queuedata.json
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc       100 Oct 12 18:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:33:05] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 18:14 run_atlas
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc       105 Oct 12 18:14 job.xml
[2025-10-12 22:33:05] -rw-r--r--. 2 boinc boinc 221559384 Oct 12 18:14 EVNT.46676267._003607.pool.root.1
[2025-10-12 22:33:05] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:14 start_atlas.sh
[2025-10-12 22:33:05] drwxrwx--x. 2 boinc boinc        68 Oct 12 18:14 shared
[2025-10-12 22:33:05] -rw-r--r--. 2 boinc boinc    569677 Oct 12 18:14 input.tar.gz
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc      6389 Oct 12 18:14 init_data.xml
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc         0 Oct 12 18:14 boinc_lockfile
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc      2550 Oct 12 18:14 pandaJob.out
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc    975528 Oct 12 18:18 agis_schedconf.cvmfs.json
[2025-10-12 22:33:05] drwx------. 5 boinc boinc      4096 Oct 12 18:18 pilot3
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc 192617257 Oct 12 22:31 HITS.46676269._075772.pool.root.1
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc       531 Oct 12 22:31 boinc_task_state.xml
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc      1018 Oct 12 22:31 memory_monitor_summary.json
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc   1560580 Oct 12 22:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc    461972 Oct 12 22:31 log.46676269._075772.job.log.tgz.1
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc        95 Oct 12 22:32 pilot_heartbeat.json
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc      7780 Oct 12 22:32 heartbeat.json
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc      8192 Oct 12 22:32 boinc_mmap_file
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc        28 Oct 12 22:32 wrapper_checkpoint.txt
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc       889 Oct 12 22:33 pilotlog.txt
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc   2046303 Oct 12 22:33 log.46676269._075772.job.log.1
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc       357 Oct 12 22:33 output.list
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc       620 Oct 12 22:33 runtime_log
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc   2529280 Oct 12 22:33 result.tar.gz
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc      8703 Oct 12 22:33 runtime_log.err
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc       657 Oct 12 22:33 M79KDmjB8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoPjNDmV8cvnn.diag
[2025-10-12 22:33:05] -rw-r--r--. 1 boinc boinc     20645 Oct 12 22:33 stderr.txt
[2025-10-12 22:33:05] HITS file was successfully produced:
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc 192617257 Oct 12 22:31 shared/HITS.pool.root.1
[2025-10-12 22:33:05]  *** Contents of shared directory: ***
[2025-10-12 22:33:05] total 407520
[2025-10-12 22:33:05] -rw-r--r--. 2 boinc boinc 221559384 Oct 12 18:14 ATLAS.root_0
[2025-10-12 22:33:05] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:14 start_atlas.sh
[2025-10-12 22:33:05] -rw-r--r--. 2 boinc boinc    569677 Oct 12 18:14 input.tar.gz
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc 192617257 Oct 12 22:31 HITS.pool.root.1
[2025-10-12 22:33:05] -rw-------. 1 boinc boinc   2529280 Oct 12 22:33 result.tar.gz
22:33:07 (6023): run_atlas exited; CPU time 56314.295468
22:33:07 (6023): called boinc_finish(0)

</stderr_txt>
]]>

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