Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:26:52 (2279554): wrapper (7.7.26015): starting
23:26:52 (2279554): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 23:26:52] Arguments: --nthreads 2
[2025-10-12 23:26:52] Threads: 2
[2025-10-12 23:26:52] Checking for CVMFS
[2025-10-12 23:26:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:26:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:26:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:26:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:26:52] 2.9.2.0 1188606 4752 62652 151638 0 56 34512380 36864000 0 130560 0 2868866 99.988 164928 765 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 23:26:52] CVMFS is ok
[2025-10-12 23:26:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:26:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:26:52] Further information can be found at the LHC@home message board.
[2025-10-12 23:26:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:26:52] Checking for apptainer binary...
[2025-10-12 23:26:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:26:52] Running /usr/bin/apptainer --version
[2025-10-12 23:26:52] apptainer version 1.4.1-1.1
[2025-10-12 23:26:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:26:52] magicA244
[2025-10-12 23:26:52] apptainer works
[2025-10-12 23:26:52] Set ATHENA_PROC_NUMBER=2
[2025-10-12 23:26:52] Set ATHENA_CORE_NUMBER=2
[2025-10-12 23:26:52] Starting ATLAS job with PandaID=6839866023
[2025-10-12 23:26:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:34:45]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:34:45] 2025-10-12 23:34:15,263 | INFO     | did not find any defunct processes belonging to 2289668
[2025-10-13 01:34:45] 2025-10-12 23:34:15,263 | INFO     | ready for new job
[2025-10-13 01:34:45] 2025-10-12 23:34:15,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:34:45] 2025-10-12 23:34:15,264 | INFO     | ***************************************
[2025-10-13 01:34:45] 2025-10-12 23:34:15,264 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:34:45] 2025-10-12 23:34:15,264 | INFO     | ***************************************
[2025-10-13 01:34:45] 2025-10-12 23:34:15,264 | INFO     | 
[2025-10-13 01:34:45] 2025-10-12 23:34:15,264 | INFO     | architecture information:
[2025-10-13 01:34:45] 2025-10-12 23:34:15,264 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:34:45] 2025-10-12 23:34:15,272 | INFO     | cat /etc/os-release:
[2025-10-13 01:34:45] NAME="CentOS Linux"
[2025-10-13 01:34:45] VERSION="7 (Core)"
[2025-10-13 01:34:45] ID="centos"
[2025-10-13 01:34:45] ID_LIKE="rhel fedora"
[2025-10-13 01:34:45] VERSION_ID="7"
[2025-10-13 01:34:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:34:45] ANSI_COLOR="0;31"
[2025-10-13 01:34:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:34:45] HOME_URL="https://www.centos.org/"
[2025-10-13 01:34:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:34:45] 
[2025-10-13 01:34:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:34:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:34:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:34:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:34:45] 
[2025-10-13 01:34:45] 2025-10-12 23:34:15,272 | INFO     | ***************************************
[2025-10-13 01:34:45] 2025-10-12 23:34:15,776 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 01:34:45] 2025-10-12 23:34:15,788 | INFO     | sufficient remaining disk space (489355739136 B)
[2025-10-13 01:34:45] 2025-10-12 23:34:15,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:34:45] 2025-10-12 23:34:15,788 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:34:45] 2025-10-12 23:34:15,788 | INFO     | update_server=False
[2025-10-13 01:34:45] 2025-10-12 23:34:15,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:34:45] 2025-10-12 23:34:15,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:34:45] 2025-10-12 23:34:15,874 | INFO     | all data control threads have been joined
[2025-10-13 01:34:45] 2025-10-12 23:34:16,260 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:34:45] 2025-10-12 23:34:16,260 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:34:45] 2025-10-12 23:34:16,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:34:45] 2025-10-12 23:34:16,261 | INFO     | will abort loop
[2025-10-13 01:34:45] 2025-10-12 23:34:16,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:34:45] 2025-10-12 23:34:16,492 | INFO     | all payload control threads have been joined
[2025-10-13 01:34:45] 2025-10-12 23:34:16,586 | INFO     | all job control threads have been joined
[2025-10-13 01:34:45] 2025-10-12 23:34:16,779 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:34:45] 2025-10-12 23:34:16,794 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:16,794 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:16,823 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:16,875 | INFO     | [data] control thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,268 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,350 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,386 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,387 | INFO     | [job] validate thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,498 | INFO     | [payload] control thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,531 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,591 | INFO     | [job] control thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,681 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:17,931 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:18,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:34:45] 2025-10-12 23:34:18,483 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:22,080 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:26,267 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:34:45] 2025-10-12 23:34:27,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:34:45] 2025-10-12 23:34:29,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628160116544)>', '<ExcThread(monitor, started 140627220096768)>']
[2025-10-13 01:34:45] 2025-10-12 23:34:34,187 | INFO     | all workflow threads have been joined
[2025-10-13 01:34:45] 2025-10-12 23:34:34,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:34:45] 2025-10-12 23:34:34,188 | INFO     | traces error code: 0
[2025-10-13 01:34:45] 2025-10-12 23:34:34,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:34:45] 2025-10-12 23:34:45,774 | INFO     | PID=2283257 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:34:45] 2025-10-12 23:34:45,775 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:34:45] 2025-10-12 23:34:45,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:34:45] 2025-10-12 23:34:45,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:34:45] 2025-10-12 23:34:45,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:34:45] 2025-10-12 23:34:45,775 | INFO     | [monitor] control thread has ended
[2025-10-13 01:34:45] 2025-10-12 23:34:45,813 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:34:45] 2025-10-12 23:34:45,815 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:34:45] 2025-10-12 23:34:45,817 [wrapper] pilotpid: 2283257
[2025-10-13 01:34:45] 2025-10-12 23:34:45,819 [wrapper] Pilot exit status: 0
[2025-10-13 01:34:45] 2025-10-12 23:34:45,824 [wrapper] pandaids: 6839866023
[2025-10-13 01:34:45] 2025-10-12 23:34:45,835 [wrapper] cleanup supervisor_pilot 2304761 2283258
[2025-10-13 01:34:45] 2025-10-12 23:34:45,837 [wrapper] Test setup, not cleaning
[2025-10-13 01:34:45] 2025-10-12 23:34:45,839 [wrapper] apfmon messages muted
[2025-10-13 01:34:45] 2025-10-12 23:34:45,841 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:34:45] 2025-10-12 23:34:45,843 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:34:45]  *** Error codes and diagnostics ***
[2025-10-13 01:34:45]     "exeErrorCode": 0,
[2025-10-13 01:34:45]     "exeErrorDiag": "",
[2025-10-13 01:34:45]     "pilotErrorCode": 0,
[2025-10-13 01:34:45]     "pilotErrorDiag": "",
[2025-10-13 01:34:45]  *** Listing of results directory ***
[2025-10-13 01:34:45] total 411820
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:05 queuedata.json
[2025-10-13 01:34:45] -rwx------ 1 boinc boinc     36292 Oct 12 12:07 runpilot2-wrapper.sh
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:34:45] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:26 run_atlas
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:26 job.xml
[2025-10-13 01:34:45] -rw-r--r-- 2 boinc boinc 220672513 Oct 12 23:26 EVNT.46676267._003606.pool.root.1
[2025-10-13 01:34:45] -rw-r--r-- 2 boinc boinc    569682 Oct 12 23:26 input.tar.gz
[2025-10-13 01:34:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:26 start_atlas.sh
[2025-10-13 01:34:45] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:26 shared
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:26 boinc_setup_complete
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc      6209 Oct 12 23:26 init_data.xml
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:26 boinc_lockfile
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:26 pandaJob.out
[2025-10-13 01:34:45] -rw------- 1 boinc boinc    975528 Oct 12 23:27 agis_schedconf.cvmfs.json
[2025-10-13 01:34:45] -rw------- 1 boinc boinc   1560580 Oct 12 23:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:34:45] drwx------ 5 boinc boinc      4096 Oct 12 23:27 pilot3
[2025-10-13 01:34:45] -rw------- 1 boinc boinc 194370946 Oct 13 01:33 HITS.46676269._075758.pool.root.1
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:33 boinc_task_state.xml
[2025-10-13 01:34:45] -rw------- 1 boinc boinc      1016 Oct 13 01:34 memory_monitor_summary.json
[2025-10-13 01:34:45] -rw------- 1 boinc boinc    286031 Oct 13 01:34 log.46676269._075758.job.log.tgz.1
[2025-10-13 01:34:45] -rw------- 1 boinc boinc      7765 Oct 13 01:34 heartbeat.json
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:34 boinc_mmap_file
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:34 wrapper_checkpoint.txt
[2025-10-13 01:34:45] -rw------- 1 boinc boinc       747 Oct 13 01:34 pilotlog.txt
[2025-10-13 01:34:45] -rw------- 1 boinc boinc        95 Oct 13 01:34 pilot_heartbeat.json
[2025-10-13 01:34:45] -rw------- 1 boinc boinc   1098120 Oct 13 01:34 log.46676269._075758.job.log.1
[2025-10-13 01:34:45] -rw------- 1 boinc boinc       357 Oct 13 01:34 output.list
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:34 runtime_log
[2025-10-13 01:34:45] -rw------- 1 boinc boinc   1402880 Oct 13 01:34 result.tar.gz
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc      8792 Oct 13 01:34 runtime_log.err
[2025-10-13 01:34:45] -rw------- 1 boinc boinc       662 Oct 13 01:34 E3IMDmaA8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgPjNDmG2X8ym.diag
[2025-10-13 01:34:45] -rw-r--r-- 1 boinc boinc      9967 Oct 13 01:34 stderr.txt
[2025-10-13 01:34:45] HITS file was successfully produced:
[2025-10-13 01:34:45] -rw------- 1 boinc boinc 194370946 Oct 13 01:33 shared/HITS.pool.root.1
[2025-10-13 01:34:45]  *** Contents of shared directory: ***
[2025-10-13 01:34:45] total 407276
[2025-10-13 01:34:45] -rw-r--r-- 2 boinc boinc 220672513 Oct 12 23:26 ATLAS.root_0
[2025-10-13 01:34:45] -rw-r--r-- 2 boinc boinc    569682 Oct 12 23:26 input.tar.gz
[2025-10-13 01:34:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:26 start_atlas.sh
[2025-10-13 01:34:45] -rw------- 1 boinc boinc 194370946 Oct 13 01:33 HITS.pool.root.1
[2025-10-13 01:34:45] -rw------- 1 boinc boinc   1402880 Oct 13 01:34 result.tar.gz
01:34:47 (2279554): run_atlas exited; CPU time 14823.496655
01:34:47 (2279554): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN