Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:06:27 (13588): wrapper (7.7.26015): starting
14:06:27 (13588): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:06:27] Arguments: --nthreads 8
[2025-10-12 14:06:27] Threads: 8
[2025-10-12 14:06:27] Checking for CVMFS
[2025-10-12 14:06:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:06:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:06:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:06:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:06:33] 2.11.2.0 3063 220405 143820 151619 0 171 12645201 25165824 4632 130560 0 119087953 99.870 67793522 3240 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 14:06:33] CVMFS is ok
[2025-10-12 14:06:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:06:33] Checking for apptainer binary...
[2025-10-12 14:06:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:06:33] Running /usr/bin/apptainer --version
[2025-10-12 14:06:33] apptainer version 1.3.2-1.el7
[2025-10-12 14:06:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:06:35] cg-vwn462.simple-grid.lan
[2025-10-12 14:06:35] apptainer works
[2025-10-12 14:06:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:06:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:06:35] Starting ATLAS job with PandaID=6839658264
[2025-10-12 14:06:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:13:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:13:01] 2025-10-12 16:12:03,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:13:01] 2025-10-12 16:12:03,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:13:01] 2025-10-12 16:12:03,361 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:13:01] 2025-10-12 16:12:03,361 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,363 | INFO     | sum of deviations: 45082231109.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,363 | INFO     | mean x: 1760278445.5
[2025-10-12 18:13:01] 2025-10-12 16:12:03,363 | INFO     | mean y: 2475565.5
[2025-10-12 18:13:01] 2025-10-12 16:12:03,364 | INFO     | -- intersect: -21590483508.737064
[2025-10-12 18:13:01] 2025-10-12 16:12:03,364 | INFO     | intersect: -21590483508.737064
[2025-10-12 18:13:01] 2025-10-12 16:12:03,364 | INFO     | chi2: 7.14443104344037
[2025-10-12 18:13:01] 2025-10-12 16:12:03,364 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,366 | INFO     | sum of deviations: 59544837680.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,366 | INFO     | mean x: 1760278293.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,366 | INFO     | mean y: 2484717.0269058296
[2025-10-12 18:13:01] 2025-10-12 16:12:03,366 | INFO     | -- intersect: -30479354598.154568
[2025-10-12 18:13:01] 2025-10-12 16:12:03,367 | INFO     | intersect: -30479354598.154568
[2025-10-12 18:13:01] 2025-10-12 16:12:03,367 | INFO     | chi2: 6.441336995735047
[2025-10-12 18:13:01] 2025-10-12 16:12:03,367 | INFO     | current chi2=6.441336995735047 (change=9.841148209427624 %)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,367 | INFO     | right removable region: 222
[2025-10-12 18:13:01] 2025-10-12 16:12:03,367 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,369 | INFO     | sum of deviations: -33325069210.000004
[2025-10-12 18:13:01] 2025-10-12 16:12:03,369 | INFO     | mean x: 1760278598.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,369 | INFO     | mean y: 2526075.33632287
[2025-10-12 18:13:01] 2025-10-12 16:12:03,369 | INFO     | -- intersect: 17062100345.954165
[2025-10-12 18:13:01] 2025-10-12 16:12:03,370 | INFO     | intersect: 17062100345.954165
[2025-10-12 18:13:01] 2025-10-12 16:12:03,370 | INFO     | chi2: 2.4337423435696515
[2025-10-12 18:13:01] 2025-10-12 16:12:03,370 | INFO     | current chi2=2.4337423435696515 (change=65.9351132543412 %)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,371 | INFO     | sum of square deviations: 3212467674.5
[2025-10-12 18:13:01] 2025-10-12 16:12:03,372 | INFO     | sum of deviations: -71906214095.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,372 | INFO     | mean x: 1760278750.5
[2025-10-12 18:13:01] 2025-10-12 16:12:03,373 | INFO     | mean y: 2551920.623853211
[2025-10-12 18:13:01] 2025-10-12 16:12:03,373 | INFO     | -- intersect: 39403720593.872116
[2025-10-12 18:13:01] 2025-10-12 16:12:03,373 | INFO     | intersect: 39403720593.872116
[2025-10-12 18:13:01] 2025-10-12 16:12:03,373 | INFO     | chi2: 1.0223826462642758
[2025-10-12 18:13:01] 2025-10-12 16:12:03,373 | INFO     | current chi2=1.0223826462642758 (change=57.99133589611163 %)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,374 | INFO     | sum of square deviations: 2996454322.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,375 | INFO     | sum of deviations: -72611294246.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,375 | INFO     | mean x: 1760278903.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,375 | INFO     | mean y: 2552381.511737089
[2025-10-12 18:13:01] 2025-10-12 16:12:03,375 | INFO     | -- intersect: 42658343408.37028
[2025-10-12 18:13:01] 2025-10-12 16:12:03,375 | INFO     | intersect: 42658343408.37028
[2025-10-12 18:13:01] 2025-10-12 16:12:03,376 | INFO     | chi2: 0.9932883680297546
[2025-10-12 18:13:01] 2025-10-12 16:12:03,376 | INFO     | current chi2=0.9932883680297546 (change=2.8457327929841028 %)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,376 | INFO     | left removable region: 30
[2025-10-12 18:13:01] 2025-10-12 16:12:03,376 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,378 | INFO     | sum of deviations: -37921421497.5
[2025-10-12 18:13:01] 2025-10-12 16:12:03,378 | INFO     | mean x: 1760279177.5
[2025-10-12 18:13:01] 2025-10-12 16:12:03,378 | INFO     | mean y: 2549106.3385416665
[2025-10-12 18:13:01] 2025-10-12 16:12:03,378 | INFO     | -- intersect: 30418110119.796783
[2025-10-12 18:13:01] 2025-10-12 16:12:03,378 | INFO     | intersect: 30418110119.796783
[2025-10-12 18:13:01] 2025-10-12 16:12:03,378 | INFO     | chi2: 0.18347772026568224
[2025-10-12 18:13:01] 2025-10-12 16:12:03,379 | INFO     | -- intersect: 30418110119.796783
[2025-10-12 18:13:01] 2025-10-12 16:12:03,379 | INFO     | current memory leak: -17.28 B/s (using 192 data points, chi2=0.18)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,379 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,379 | INFO     | ..............................
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . Timing measurements:
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . get job = 0 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . initial setup = 9 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . payload setup = 131 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . stage-in = 0 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . payload execution = 14059 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . stage-out = 3 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | . log creation = 1 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,380 | INFO     | ..............................
[2025-10-12 18:13:01] 2025-10-12 16:12:03,497 | INFO     | 
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | job summary report
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | --------------------------------------------------
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | PanDA job id: 6839658264
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | task id: 46676269
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | errors: (none)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | pilot state: finished 
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | transexitcode: 0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,498 | INFO     | exeerrorcode: 0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | exeerrordiag: 
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | exitcode: 0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | exitmsg: OK
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | cpuconsumptiontime: 52581 s
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | nevents: 400
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | neventsw: 0
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | pid: 24197
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | pgrp: 24197
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | corecount: 8
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | event service: False
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 22: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 65: 2349182, 76: 2349210, 87: 2349266, 97: 2349294, 98: 2349864, 1
[2025-10-12 18:13:01] 2025-10-12 16:12:03,499 | INFO     | --------------------------------------------------
[2025-10-12 18:13:01] 2025-10-12 16:12:03,500 | INFO     | 
[2025-10-12 18:13:01] 2025-10-12 16:12:03,500 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-10-12 18:13:01] 2025-10-12 16:12:03,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | job 6839658264 has completed (purged errors)
[2025-10-12 18:13:01] 2025-10-12 16:12:03,537 | INFO     | overall cleanup function is called
[2025-10-12 18:13:01] 2025-10-12 16:12:04,547 | INFO     | --- collectZombieJob: --- 10, [24197]
[2025-10-12 18:13:01] 2025-10-12 16:12:04,547 | INFO     | zombie collector waiting for pid 24197
[2025-10-12 18:13:01] 2025-10-12 16:12:04,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:13:01] 2025-10-12 16:12:04,547 | INFO     | collected zombie processes
[2025-10-12 18:13:01] 2025-10-12 16:12:04,547 | INFO     | will attempt to kill all subprocesses of pid=24197
[2025-10-12 18:13:01] 2025-10-12 16:12:04,651 | INFO     | process IDs to be killed: [24197] (in reverse order)
[2025-10-12 18:13:01] 2025-10-12 16:12:04,830 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:13:01] 2025-10-12 16:12:04,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:13:01] 2025-10-12 16:12:04,834 | INFO     | did not find any defunct processes belonging to 24197
[2025-10-12 18:13:01] 2025-10-12 16:12:04,837 | INFO     | did not find any defunct processes belonging to 24197
[2025-10-12 18:13:01] 2025-10-12 16:12:04,837 | INFO     | ready for new job
[2025-10-12 18:13:01] 2025-10-12 16:12:04,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:13:01] 2025-10-12 16:12:04,842 | INFO     | ***************************************
[2025-10-12 18:13:01] 2025-10-12 16:12:04,842 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:13:01] 2025-10-12 16:12:04,842 | INFO     | ***************************************
[2025-10-12 18:13:01] 2025-10-12 16:12:04,842 | INFO     | 
[2025-10-12 18:13:01] 2025-10-12 16:12:04,843 | INFO     | pilot is running in a VM
[2025-10-12 18:13:01] 2025-10-12 16:12:04,843 | INFO     | architecture information:
[2025-10-12 18:13:01] 2025-10-12 16:12:04,855 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:13:01] 2025-10-12 16:12:05,122 | INFO     | cat /etc/os-release:
[2025-10-12 18:13:01] NAME="CentOS Linux"
[2025-10-12 18:13:01] VERSION="7 (Core)"
[2025-10-12 18:13:01] ID="centos"
[2025-10-12 18:13:01] ID_LIKE="rhel fedora"
[2025-10-12 18:13:01] VERSION_ID="7"
[2025-10-12 18:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:13:01] ANSI_COLOR="0;31"
[2025-10-12 18:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:13:01] HOME_URL="https://www.centos.org/"
[2025-10-12 18:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:13:01] 
[2025-10-12 18:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:13:01] 
[2025-10-12 18:13:01] 2025-10-12 16:12:05,122 | INFO     | ***************************************
[2025-10-12 18:13:01] 2025-10-12 16:12:05,626 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-10-12 18:13:01] 2025-10-12 16:12:05,787 | INFO     | sufficient remaining disk space (495834890240 B)
[2025-10-12 18:13:01] 2025-10-12 16:12:05,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:13:01] 2025-10-12 16:12:05,787 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:13:01] 2025-10-12 16:12:05,787 | INFO     | update_server=False
[2025-10-12 18:13:01] 2025-10-12 16:12:05,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:13:01] 2025-10-12 16:12:05,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:13:01] 2025-10-12 16:12:05,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:13:01] 2025-10-12 16:12:05,838 | INFO     | all data control threads have been joined
[2025-10-12 18:13:01] 2025-10-12 16:12:05,849 | INFO     | all payload control threads have been joined
[2025-10-12 18:13:01] 2025-10-12 16:12:05,883 | INFO     | all job control threads have been joined
[2025-10-12 18:13:01] 2025-10-12 16:12:06,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:13:01] 2025-10-12 16:12:06,592 | INFO     | aborting loop
[2025-10-12 18:13:01] 2025-10-12 16:12:06,792 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:06,844 | INFO     | [data] control thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:06,855 | INFO     | [payload] control thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:06,889 | INFO     | [job] control thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,066 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,132 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,194 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,326 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,598 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,701 | INFO     | [job] validate thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,801 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,946 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:07,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:08,315 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:08,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:13:01] 2025-10-12 16:12:09,516 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:09,798 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:13:01] 2025-10-12 16:12:36,368 | INFO     | PID=17666 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:13:01] 2025-10-12 16:12:36,368 | INFO     | .. there are 9 such processes running
[2025-10-12 18:13:01] 2025-10-12 16:12:36,369 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:13:01] 2025-10-12 16:12:36,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:13:01] 2025-10-12 16:12:36,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:13:01] 2025-10-12 16:12:51,126 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:13:01] 2025-10-12 16:12:51,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280306702144)>', '<ExcThread(monitor, started 140279705220864)>']
[2025-10-12 18:13:01] 2025-10-12 16:12:52,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:13:01] 2025-10-12 16:12:52,465 | INFO     | [monitor] control thread has ended
[2025-10-12 18:13:01] 2025-10-12 16:12:56,491 | INFO     | all workflow threads have been joined
[2025-10-12 18:13:01] 2025-10-12 16:12:56,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:13:01] 2025-10-12 16:12:56,491 | INFO     | traces error code: 0
[2025-10-12 18:13:01] 2025-10-12 16:12:56,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:13:01] 2025-10-12 16:12:56,720 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:13:01] 2025-10-12 16:12:56,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:13:01] 2025-10-12 16:12:56,770 [wrapper] pilotpid: 17666
[2025-10-12 18:13:01] 2025-10-12 16:12:56,852 [wrapper] Pilot exit status: 0
[2025-10-12 18:13:01] 2025-10-12 16:12:57,255 [wrapper] pandaids: 6839658264
[2025-10-12 18:13:01] 2025-10-12 16:12:58,401 [wrapper] cleanup supervisor_pilot 18305 17667
[2025-10-12 18:13:01] 2025-10-12 16:12:58,496 [wrapper] Test setup, not cleaning
[2025-10-12 18:13:01] 2025-10-12 16:12:58,588 [wrapper] apfmon messages muted
[2025-10-12 18:13:01] 2025-10-12 16:12:58,682 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:13:01] 2025-10-12 16:12:58,733 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:13:01]  *** Error codes and diagnostics ***
[2025-10-12 18:13:01]     "exeErrorCode": 0,
[2025-10-12 18:13:01]     "exeErrorDiag": "",
[2025-10-12 18:13:01]     "pilotErrorCode": 0,
[2025-10-12 18:13:01]     "pilotErrorDiag": "",
[2025-10-12 18:13:01]  *** Listing of results directory ***
[2025-10-12 18:13:01] total 423484
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-12 18:13:01] -rwx------. 1 boinc boinc     36292 Oct 12 09:14 runpilot2-wrapper.sh
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc      5112 Oct 12 09:14 queuedata.json
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:13:01] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:06 run_atlas
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:06 job.xml
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc      6391 Oct 12 14:06 init_data.xml
[2025-10-12 18:13:01] -rw-r--r--. 2 boinc boinc 222575902 Oct 12 14:06 EVNT.46676267._003496.pool.root.1
[2025-10-12 18:13:01] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:06 start_atlas.sh
[2025-10-12 18:13:01] drwxrwx--x. 2 boinc boinc        68 Oct 12 14:06 shared
[2025-10-12 18:13:01] -rw-r--r--. 2 boinc boinc    569674 Oct 12 14:06 input.tar.gz
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:06 boinc_lockfile
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc      2550 Oct 12 14:06 pandaJob.out
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc    975520 Oct 12 14:10 agis_schedconf.cvmfs.json
[2025-10-12 18:13:01] drwx------. 5 boinc boinc      4096 Oct 12 14:10 pilot3
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc 202390109 Oct 12 18:09 HITS.46676269._073421.pool.root.1
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc       531 Oct 12 18:09 boinc_task_state.xml
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc      1015 Oct 12 18:10 memory_monitor_summary.json
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc   1560580 Oct 12 18:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc    450829 Oct 12 18:10 log.46676269._073421.job.log.tgz.1
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc        95 Oct 12 18:11 pilot_heartbeat.json
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc      7784 Oct 12 18:12 heartbeat.json
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc        28 Oct 12 18:12 wrapper_checkpoint.txt
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:12 boinc_mmap_file
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc      4885 Oct 12 18:12 pilotlog.txt
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc   1941526 Oct 12 18:12 log.46676269._073421.job.log.1
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc       357 Oct 12 18:13 output.list
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:13 runtime_log
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc   2416640 Oct 12 18:13 result.tar.gz
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc      8717 Oct 12 18:13 runtime_log.err
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc       657 Oct 12 18:13 OoJNDmqS5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8ziNDmCXZSJm.diag
[2025-10-12 18:13:01] -rw-r--r--. 1 boinc boinc     20596 Oct 12 18:13 stderr.txt
[2025-10-12 18:13:01] HITS file was successfully produced:
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc 202390109 Oct 12 18:09 shared/HITS.pool.root.1
[2025-10-12 18:13:01]  *** Contents of shared directory: ***
[2025-10-12 18:13:01] total 417944
[2025-10-12 18:13:01] -rw-r--r--. 2 boinc boinc 222575902 Oct 12 14:06 ATLAS.root_0
[2025-10-12 18:13:01] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:06 start_atlas.sh
[2025-10-12 18:13:01] -rw-r--r--. 2 boinc boinc    569674 Oct 12 14:06 input.tar.gz
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc 202390109 Oct 12 18:09 HITS.pool.root.1
[2025-10-12 18:13:01] -rw-------. 1 boinc boinc   2416640 Oct 12 18:13 result.tar.gz
18:13:02 (13588): run_atlas exited; CPU time 52763.367766
18:13:02 (13588): called boinc_finish(0)

</stderr_txt>
]]>

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