Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:58:38 (17781): wrapper (7.7.26015): starting
07:58:38 (17781): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:58:38] Arguments: --nthreads 8
[2025-10-12 07:58:38] Threads: 8
[2025-10-12 07:58:38] Checking for CVMFS
[2025-10-12 07:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:58:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:58:39] 2.11.2.0 2800 222852 119444 151619 0 57 14074116 20275200 1 130560 1 78972409 99.974 14672382 12656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:58:39] CVMFS is ok
[2025-10-12 07:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:58:39] Further information can be found at the LHC@home message board.
[2025-10-12 07:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:58:39] Checking for apptainer binary...
[2025-10-12 07:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:58:39] Running /usr/bin/apptainer --version
[2025-10-12 07:58:39] apptainer version 1.3.2-1.el7
[2025-10-12 07:58:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:58:40] c-204-36.aglt2.org
[2025-10-12 07:58:40] apptainer works
[2025-10-12 07:58:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:58:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:58:40] Starting ATLAS job with PandaID=6839865988
[2025-10-12 07:58:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:19:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:19:16] 2025-10-12 14:18:16,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:19:16] 2025-10-12 14:18:16,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:19:16] 2025-10-12 14:18:16,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:19:16] 2025-10-12 14:18:16,700 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:19:16] 2025-10-12 14:18:16,701 | INFO     | sum of square deviations: 797291228.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,702 | INFO     | sum of deviations: 6845525469.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,702 | INFO     | mean x: 1760274516.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,702 | INFO     | mean y: 2461553.6204379564
[2025-10-12 10:19:16] 2025-10-12 14:18:16,702 | INFO     | -- intersect: -15111217875.585133
[2025-10-12 10:19:16] 2025-10-12 14:18:16,702 | INFO     | intersect: -15111217875.585133
[2025-10-12 10:19:16] 2025-10-12 14:18:16,703 | INFO     | chi2: 2.1965706748779796
[2025-10-12 10:19:16] 2025-10-12 14:18:16,703 | INFO     | sum of square deviations: 713140813.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,704 | INFO     | sum of deviations: 15366815335.499998
[2025-10-12 10:19:16] 2025-10-12 14:18:16,704 | INFO     | mean x: 1760274363.5
[2025-10-12 10:19:16] 2025-10-12 14:18:16,704 | INFO     | mean y: 2476510.5833333335
[2025-10-12 10:19:16] 2025-10-12 14:18:16,705 | INFO     | -- intersect: -37928056408.89395
[2025-10-12 10:19:16] 2025-10-12 14:18:16,705 | INFO     | intersect: -37928056408.89395
[2025-10-12 10:19:16] 2025-10-12 14:18:16,705 | INFO     | chi2: 1.4261814662275811
[2025-10-12 10:19:16] 2025-10-12 14:18:16,705 | INFO     | current chi2=1.4261814662275811 (change=35.072361543440614 %)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,706 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,706 | INFO     | sum of deviations: 14673468138.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,707 | INFO     | mean x: 1760274211.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,707 | INFO     | mean y: 2475154.9212598423
[2025-10-12 10:19:16] 2025-10-12 14:18:16,707 | INFO     | -- intersect: -40665302460.99716
[2025-10-12 10:19:16] 2025-10-12 14:18:16,707 | INFO     | intersect: -40665302460.99716
[2025-10-12 10:19:16] 2025-10-12 14:18:16,708 | INFO     | chi2: 1.4282498661818346
[2025-10-12 10:19:16] 2025-10-12 14:18:16,708 | INFO     | current chi2=1.4282498661818346 (change=-0.14503062921751572 %)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,708 | INFO     | right removable region: 126
[2025-10-12 10:19:16] 2025-10-12 14:18:16,708 | INFO     | sum of square deviations: 713140813.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,709 | INFO     | sum of deviations: -12035686404.499996
[2025-10-12 10:19:16] 2025-10-12 14:18:16,709 | INFO     | mean x: 1760274668.5
[2025-10-12 10:19:16] 2025-10-12 14:18:16,709 | INFO     | mean y: 2495151.053030303
[2025-10-12 10:19:16] 2025-10-12 14:18:16,710 | INFO     | -- intersect: 29710672708.19866
[2025-10-12 10:19:16] 2025-10-12 14:18:16,710 | INFO     | intersect: 29710672708.19866
[2025-10-12 10:19:16] 2025-10-12 14:18:16,710 | INFO     | chi2: 0.8698227865761565
[2025-10-12 10:19:16] 2025-10-12 14:18:16,710 | INFO     | current chi2=0.8698227865761565 (change=60.40087412054358 %)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,711 | INFO     | sum of square deviations: 635130048.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,711 | INFO     | sum of deviations: -11330958497.999998
[2025-10-12 10:19:16] 2025-10-12 14:18:16,712 | INFO     | mean x: 1760274821.0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,712 | INFO     | mean y: 2493670.05511811
[2025-10-12 10:19:16] 2025-10-12 14:18:16,712 | INFO     | -- intersect: 31406457322.27611
[2025-10-12 10:19:16] 2025-10-12 14:18:16,712 | INFO     | intersect: 31406457322.27611
[2025-10-12 10:19:16] 2025-10-12 14:18:16,713 | INFO     | chi2: 0.8558454806622592
[2025-10-12 10:19:16] 2025-10-12 14:18:16,713 | INFO     | current chi2=0.8558454806622592 (change=1.606914204779064 %)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,713 | INFO     | left removable region: 20
[2025-10-12 10:19:16] 2025-10-12 14:18:16,713 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 10:19:16] 2025-10-12 14:18:16,714 | INFO     | sum of deviations: 1771446770.9999998
[2025-10-12 10:19:16] 2025-10-12 14:18:16,714 | INFO     | mean x: 1760274790.5
[2025-10-12 10:19:16] 2025-10-12 14:18:16,714 | INFO     | mean y: 2499613.2075471696
[2025-10-12 10:19:16] 2025-10-12 14:18:16,715 | INFO     | -- intersect: -8441558439.09962
[2025-10-12 10:19:16] 2025-10-12 14:18:16,715 | INFO     | intersect: -8441558439.09962
[2025-10-12 10:19:16] 2025-10-12 14:18:16,715 | INFO     | chi2: 0.000501768817186773
[2025-10-12 10:19:16] 2025-10-12 14:18:16,715 | INFO     | -- intersect: -8441558439.09962
[2025-10-12 10:19:16] 2025-10-12 14:18:16,716 | INFO     | current memory leak: 4.80 B/s (using 106 data points, chi2=0.00)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,716 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,717 | INFO     | ..............................
[2025-10-12 10:19:16] 2025-10-12 14:18:16,717 | INFO     | . Timing measurements:
[2025-10-12 10:19:16] 2025-10-12 14:18:16,717 | INFO     | . get job = 0 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,717 | INFO     | . initial setup = 2 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,717 | INFO     | . payload setup = 8 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,718 | INFO     | . stage-in = 0 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,718 | INFO     | . payload execution = 8321 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,718 | INFO     | . stage-out = 1 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,718 | INFO     | . log creation = 0 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,718 | INFO     | ..............................
[2025-10-12 10:19:16] 2025-10-12 14:18:16,856 | INFO     | 
[2025-10-12 10:19:16] 2025-10-12 14:18:16,857 | INFO     | job summary report
[2025-10-12 10:19:16] 2025-10-12 14:18:16,857 | INFO     | --------------------------------------------------
[2025-10-12 10:19:16] 2025-10-12 14:18:16,857 | INFO     | PanDA job id: 6839865988
[2025-10-12 10:19:16] 2025-10-12 14:18:16,857 | INFO     | task id: 46676269
[2025-10-12 10:19:16] 2025-10-12 14:18:16,857 | INFO     | errors: (none)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | pilot state: finished 
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | transexitcode: 0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | exeerrorcode: 0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | exeerrordiag: 
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | exitcode: 0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | exitmsg: OK
[2025-10-12 10:19:16] 2025-10-12 14:18:16,858 | INFO     | cpuconsumptiontime: 58834 s
[2025-10-12 10:19:16] 2025-10-12 14:18:16,859 | INFO     | nevents: 400
[2025-10-12 10:19:16] 2025-10-12 14:18:16,859 | INFO     | neventsw: 0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,859 | INFO     | pid: 28100
[2025-10-12 10:19:16] 2025-10-12 14:18:16,859 | INFO     | pgrp: 28100
[2025-10-12 10:19:16] 2025-10-12 14:18:16,859 | INFO     | corecount: 8
[2025-10-12 10:19:16] 2025-10-12 14:18:16,859 | INFO     | event service: False
[2025-10-12 10:19:16] 2025-10-12 14:18:16,860 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 8333: 2377001, 8336: 2386055, 8343: 2386193}
[2025-10-12 10:19:16] 2025-10-12 14:18:16,860 | INFO     | --------------------------------------------------
[2025-10-12 10:19:16] 2025-10-12 14:18:16,860 | INFO     | 
[2025-10-12 10:19:16] 2025-10-12 14:18:16,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:19:16] 2025-10-12 14:18:16,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:19:16] 2025-10-12 14:18:16,891 | INFO     | job 6839865988 has completed (purged errors)
[2025-10-12 10:19:16] 2025-10-12 14:18:16,891 | INFO     | overall cleanup function is called
[2025-10-12 10:19:16] 2025-10-12 14:18:17,907 | INFO     | --- collectZombieJob: --- 10, [28100]
[2025-10-12 10:19:16] 2025-10-12 14:18:17,908 | INFO     | zombie collector waiting for pid 28100
[2025-10-12 10:19:16] 2025-10-12 14:18:17,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:19:16] 2025-10-12 14:18:17,909 | INFO     | collected zombie processes
[2025-10-12 10:19:16] 2025-10-12 14:18:17,909 | INFO     | will attempt to kill all subprocesses of pid=28100
[2025-10-12 10:19:16] 2025-10-12 14:18:18,013 | INFO     | process IDs to be killed: [28100] (in reverse order)
[2025-10-12 10:19:16] 2025-10-12 14:18:18,079 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:19:16] 2025-10-12 14:18:18,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:19:16] 2025-10-12 14:18:18,084 | INFO     | did not find any defunct processes belonging to 28100
[2025-10-12 10:19:16] 2025-10-12 14:18:18,088 | INFO     | did not find any defunct processes belonging to 28100
[2025-10-12 10:19:16] 2025-10-12 14:18:18,088 | INFO     | ready for new job
[2025-10-12 10:19:16] 2025-10-12 14:18:18,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:19:16] 2025-10-12 14:18:18,091 | INFO     | ***************************************
[2025-10-12 10:19:16] 2025-10-12 14:18:18,091 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:19:16] 2025-10-12 14:18:18,091 | INFO     | ***************************************
[2025-10-12 10:19:16] 2025-10-12 14:18:18,091 | INFO     | 
[2025-10-12 10:19:16] 2025-10-12 14:18:18,092 | INFO     | architecture information:
[2025-10-12 10:19:16] 2025-10-12 14:18:18,092 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:19:16] 2025-10-12 14:18:18,110 | INFO     | cat /etc/os-release:
[2025-10-12 10:19:16] NAME="CentOS Linux"
[2025-10-12 10:19:16] VERSION="7 (Core)"
[2025-10-12 10:19:16] ID="centos"
[2025-10-12 10:19:16] ID_LIKE="rhel fedora"
[2025-10-12 10:19:16] VERSION_ID="7"
[2025-10-12 10:19:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:19:16] ANSI_COLOR="0;31"
[2025-10-12 10:19:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:19:16] HOME_URL="https://www.centos.org/"
[2025-10-12 10:19:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:19:16] 
[2025-10-12 10:19:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:19:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:19:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:19:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:19:16] 
[2025-10-12 10:19:16] 2025-10-12 14:18:18,110 | INFO     | ***************************************
[2025-10-12 10:19:16] 2025-10-12 14:18:18,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:19:16] 2025-10-12 14:18:18,632 | INFO     | sufficient remaining disk space (18548260864 B)
[2025-10-12 10:19:16] 2025-10-12 14:18:18,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:19:16] 2025-10-12 14:18:18,633 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:19:16] 2025-10-12 14:18:18,633 | INFO     | update_server=False
[2025-10-12 10:19:16] 2025-10-12 14:18:18,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:19:16] 2025-10-12 14:18:18,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:19:16] 2025-10-12 14:18:18,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:19:16] 2025-10-12 14:18:18,635 | INFO     | aborting loop
[2025-10-12 10:19:16] 2025-10-12 14:18:18,754 | INFO     | all data control threads have been joined
[2025-10-12 10:19:16] 2025-10-12 14:18:19,638 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:19,640 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:19,641 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:19,668 | INFO     | all job control threads have been joined
[2025-10-12 10:19:16] 2025-10-12 14:18:19,759 | INFO     | [data] control thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:19,911 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:19,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:19:16] 2025-10-12 14:18:20,038 | INFO     | all payload control threads have been joined
[2025-10-12 10:19:16] 2025-10-12 14:18:20,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:19:16] 2025-10-12 14:18:20,254 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:20,316 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:20,671 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:20,673 | INFO     | [job] control thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:20,737 | INFO     | [job] validate thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:20,931 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:21,043 | INFO     | [payload] control thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:21,232 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:21,969 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:24,068 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:29,099 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:19:16] 2025-10-12 14:18:30,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:19:16] 2025-10-12 14:18:49,134 | INFO     | PID=21465 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:19:16] 2025-10-12 14:18:49,135 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:19:16] 2025-10-12 14:18:49,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:19:16] 2025-10-12 14:18:49,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:19:16] 2025-10-12 14:19:10,487 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:19:16] 2025-10-12 14:19:11,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711660050240)>', '<ExcThread(monitor, started 140710678345472)>']
[2025-10-12 10:19:16] 2025-10-12 14:19:12,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:19:16] 2025-10-12 14:19:12,238 | INFO     | [monitor] control thread has ended
[2025-10-12 10:19:16] 2025-10-12 14:19:16,460 | INFO     | all workflow threads have been joined
[2025-10-12 10:19:16] 2025-10-12 14:19:16,461 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:19:16] 2025-10-12 14:19:16,462 | INFO     | traces error code: 0
[2025-10-12 10:19:16] 2025-10-12 14:19:16,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:19:16] 2025-10-12 14:19:16,599 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:19:16] 2025-10-12 14:19:16,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:19:16] 2025-10-12 14:19:16,610 [wrapper] pilotpid: 21465
[2025-10-12 10:19:16] 2025-10-12 14:19:16,614 [wrapper] Pilot exit status: 0
[2025-10-12 10:19:16] 2025-10-12 14:19:16,630 [wrapper] pandaids: 6839865988
[2025-10-12 10:19:16] 2025-10-12 14:19:16,677 [wrapper] cleanup supervisor_pilot 32713 21466
[2025-10-12 10:19:16] 2025-10-12 14:19:16,682 [wrapper] Test setup, not cleaning
[2025-10-12 10:19:16] 2025-10-12 14:19:16,686 [wrapper] apfmon messages muted
[2025-10-12 10:19:16] 2025-10-12 14:19:16,690 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:19:16] 2025-10-12 14:19:16,695 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:19:16]  *** Error codes and diagnostics ***
[2025-10-12 10:19:16]     "exeErrorCode": 0,
[2025-10-12 10:19:16]     "exeErrorDiag": "",
[2025-10-12 10:19:16]     "pilotErrorCode": 0,
[2025-10-12 10:19:16]     "pilotErrorDiag": "",
[2025-10-12 10:19:16]  *** Listing of results directory ***
[2025-10-12 10:19:16] total 417956
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 10:19:16] -rwx------ 1 boincer umatlas     36292 Oct 12 06:05 runpilot2-wrapper.sh
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 06:05 queuedata.json
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas       100 Oct 12 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:19:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 07:58 run_atlas
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas       105 Oct 12 07:58 job.xml
[2025-10-12 10:19:16] -rw-r--r-- 2 boincer umatlas 225018789 Oct 12 07:58 EVNT.46676267._003605.pool.root.1
[2025-10-12 10:19:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:58 start_atlas.sh
[2025-10-12 10:19:16] drwxrwx--x 2 boincer umatlas      4096 Oct 12 07:58 shared
[2025-10-12 10:19:16] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 07:58 input.tar.gz
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas         0 Oct 12 07:58 boinc_lockfile
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 07:58 pandaJob.out
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas    975520 Oct 12 07:58 agis_schedconf.cvmfs.json
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas   1560580 Oct 12 07:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:19:16] drwx------ 5 boincer umatlas      4096 Oct 12 07:58 pilot3
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 10:09 init_data.xml
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas 195969197 Oct 12 10:17 HITS.46676269._075723.pool.root.1
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas      1051 Oct 12 10:18 memory_monitor_summary.json
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas       530 Oct 12 10:18 boinc_task_state.xml
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas    376266 Oct 12 10:18 log.46676269._075723.job.log.tgz.1
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas      7845 Oct 12 10:18 heartbeat.json
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas        95 Oct 12 10:18 pilot_heartbeat.json
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:19 boinc_mmap_file
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:19 wrapper_checkpoint.txt
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas      4818 Oct 12 10:19 pilotlog.txt
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas   1173855 Oct 12 10:19 log.46676269._075723.job.log.1
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas       357 Oct 12 10:19 output.list
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:19 runtime_log
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas   1566720 Oct 12 10:19 result.tar.gz
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 10:19 runtime_log.err
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas       660 Oct 12 10:19 jbKKDme87R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZcTMDmCxIbZn.diag
[2025-10-12 10:19:16] -rw-r--r-- 1 boincer umatlas     20833 Oct 12 10:19 stderr.txt
[2025-10-12 10:19:16] HITS file was successfully produced:
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas 195969197 Oct 12 10:17 shared/HITS.pool.root.1
[2025-10-12 10:19:16]  *** Contents of shared directory: ***
[2025-10-12 10:19:16] total 413236
[2025-10-12 10:19:16] -rw-r--r-- 2 boincer umatlas 225018789 Oct 12 07:58 ATLAS.root_0
[2025-10-12 10:19:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 07:58 start_atlas.sh
[2025-10-12 10:19:16] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 07:58 input.tar.gz
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas 195969197 Oct 12 10:17 HITS.pool.root.1
[2025-10-12 10:19:16] -rw------- 1 boincer umatlas   1566720 Oct 12 10:19 result.tar.gz
10:19:18 (17781): run_atlas exited; CPU time 58681.185731
10:19:18 (17781): called boinc_finish(0)

</stderr_txt>
]]>

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