Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:58:19 (3984183): wrapper (7.7.26015): starting
07:58:19 (3984183): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 07:58:19] Arguments: --nthreads 12
[2025-10-12 07:58:19] Threads: 12
[2025-10-12 07:58:19] Checking for CVMFS
[2025-10-12 07:58:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:58:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:58:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:58:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:58:23] 2.8.1.0 3984433 0 29352 151619 3 1 3201929 4096000 0 130560 0 0 0.000 1292 1180 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 07:58:23] CVMFS is ok
[2025-10-12 07:58:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:58:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:58:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 07:58:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 07:58:23] Further information can be found at the LHC@home message board.
[2025-10-12 07:58:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:58:23] Checking for apptainer binary...
[2025-10-12 07:58:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 07:58:23] apptainer is not installed, using version from CVMFS
[2025-10-12 07:58:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:58:24] farmville.blisteringsheep.pec
[2025-10-12 07:58:24] apptainer works
[2025-10-12 07:58:24] Set ATHENA_PROC_NUMBER=12
[2025-10-12 07:58:24] Set ATHENA_CORE_NUMBER=12
[2025-10-12 07:58:24] Starting ATLAS job with PandaID=6839865971
[2025-10-12 07:58:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:05:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:05:53] 2025-10-12 13:05:05,919 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 09:05:53] 2025-10-12 13:05:05,919 | INFO     | summary of transferred files:
[2025-10-12 09:05:53] 2025-10-12 13:05:05,920 | INFO     |  -- lfn=log.46676269._075706.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 09:05:53] 2025-10-12 13:05:05,920 | INFO     | stage-out finished correctly
[2025-10-12 09:05:53] 2025-10-12 13:05:06,427 | INFO     | PID=3988891 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:05:53] 2025-10-12 13:05:06,528 | WARNING  | process 3996055 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 09:05:53] 2025-10-12 13:05:06,528 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6839865971/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:05:53] 2025-10-12 13:05:06,677 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 09:05:53] 2025-10-12 13:05:06,810 | INFO     | number of running child processes to parent process 3996055: 1
[2025-10-12 09:05:53] 2025-10-12 13:05:06,810 | INFO     | maximum number of monitored processes: 6
[2025-10-12 09:05:53] 2025-10-12 13:05:07,056 | INFO     | job 6839865971 has state=finished
[2025-10-12 09:05:53] 2025-10-12 13:05:07,056 | INFO     | preparing for final server update for job 6839865971 in state='finished'
[2025-10-12 09:05:53] 2025-10-12 13:05:07,056 | INFO     | this job has now completed (state=finished)
[2025-10-12 09:05:53] 2025-10-12 13:05:07,057 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 09:05:53] 2025-10-12 13:05:07,057 | INFO     | log transfer has been attempted: DONE
[2025-10-12 09:05:53] 2025-10-12 13:05:07,057 | INFO     | job 6839865971 has finished - writing final server update
[2025-10-12 09:05:53] 2025-10-12 13:05:07,057 | INFO     | total number of processed events: 400 (read)
[2025-10-12 09:05:53] 2025-10-12 13:05:07,058 | INFO     | executing command: lscpu
[2025-10-12 09:05:53] 2025-10-12 13:05:07,096 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 09:05:53] 2025-10-12 13:05:07,428 | INFO     | time since job start (3988s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:09,312 | INFO     | monitor loop #297: job 0:6839865971 is in state 'finished'
[2025-10-12 09:05:53] 2025-10-12 13:05:09,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:05:53] 2025-10-12 13:05:09,434 | INFO     | time since job start (3990s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:11,439 | INFO     | time since job start (3992s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:11,815 | INFO     | monitor loop #298: job 0:6839865971 is in state 'finished'
[2025-10-12 09:05:53] 2025-10-12 13:05:11,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:05:53] 2025-10-12 13:05:13,444 | INFO     | time since job start (3994s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:14,318 | INFO     | monitor loop #299: job 0:6839865971 is in state 'finished'
[2025-10-12 09:05:53] 2025-10-12 13:05:14,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:05:53] 2025-10-12 13:05:15,449 | INFO     | time since job start (3996s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:16,821 | INFO     | monitor loop #300: job 0:6839865971 is in state 'finished'
[2025-10-12 09:05:53] 2025-10-12 13:05:16,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:05:53] 2025-10-12 13:05:17,454 | INFO     | time since job start (3998s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:19,324 | INFO     | monitor loop #301: job 0:6839865971 is in state 'finished'
[2025-10-12 09:05:53] 2025-10-12 13:05:19,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:05:53] 2025-10-12 13:05:19,459 | INFO     | time since job start (4000s) is within the limit (172800.0s)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,213 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 09:05:53] 2025-10-12 13:05:20,220 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2999.9110208333336
[2025-10-12 09:05:53] 2025-10-12 13:05:20,227 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6839865971/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,228 | INFO     | extracted standard info from prmon json
[2025-10-12 09:05:53] 2025-10-12 13:05:20,228 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:05:53] 2025-10-12 13:05:20,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:05:53] 2025-10-12 13:05:20,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:05:53] 2025-10-12 13:05:20,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:05:53] 2025-10-12 13:05:20,229 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | sum of deviations: -4107682782.0000005
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | mean x: 1760272384.5
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | mean y: 2795225.172413793
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | -- intersect: 119551118273.90529
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | intersect: 119551118273.90529
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | chi2: 0.09628962307800386
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | -- intersect: 119551118273.90529
[2025-10-12 09:05:53] 2025-10-12 13:05:20,230 | INFO     | current memory leak: -67.91 B/s (using 58 data points, chi2=0.10)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | could have reported an average CPU frequency of 2968 MHz (6 samples)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | ..............................
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . Timing measurements:
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . get job = 0 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . initial setup = 3 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . payload setup = 4 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . stage-in = 0 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . payload execution = 3963 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . stage-out = 0 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | . log creation = 0 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,231 | INFO     | ..............................
[2025-10-12 09:05:53] 2025-10-12 13:05:20,307 | INFO     | 
[2025-10-12 09:05:53] 2025-10-12 13:05:20,307 | INFO     | job summary report
[2025-10-12 09:05:53] 2025-10-12 13:05:20,307 | INFO     | --------------------------------------------------
[2025-10-12 09:05:53] 2025-10-12 13:05:20,307 | INFO     | PanDA job id: 6839865971
[2025-10-12 09:05:53] 2025-10-12 13:05:20,307 | INFO     | task id: 46676269
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | errors: (none)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | pilot state: finished 
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | transexitcode: 0
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | exeerrorcode: 0
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | exeerrordiag: 
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | exitcode: 0
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | exitmsg: OK
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | cpuconsumptiontime: 41604 s
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | nevents: 400
[2025-10-12 09:05:53] 2025-10-12 13:05:20,308 | INFO     | neventsw: 0
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | pid: 3996055
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | pgrp: 3996055
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | corecount: 12
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | event service: False
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | sizes: {0: 2348029, 1: 2348885, 4: 2349147, 12: 2349175, 3972: 2375131, 3973: 2384129, 3974: 2384313, 3987: 2384507}
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | --------------------------------------------------
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | 
[2025-10-12 09:05:53] 2025-10-12 13:05:20,309 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:05:53] 2025-10-12 13:05:20,332 | INFO     | job 6839865971 has completed (purged errors)
[2025-10-12 09:05:53] 2025-10-12 13:05:20,332 | INFO     | overall cleanup function is called
[2025-10-12 09:05:53] 2025-10-12 13:05:21,339 | INFO     | --- collectZombieJob: --- 10, [3996055]
[2025-10-12 09:05:53] 2025-10-12 13:05:21,340 | INFO     | zombie collector waiting for pid 3996055
[2025-10-12 09:05:53] 2025-10-12 13:05:21,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:05:53] 2025-10-12 13:05:21,340 | INFO     | collected zombie processes
[2025-10-12 09:05:53] 2025-10-12 13:05:21,340 | INFO     | will attempt to kill all subprocesses of pid=3996055
[2025-10-12 09:05:53] 2025-10-12 13:05:21,578 | INFO     | process IDs to be killed: [3996055] (in reverse order)
[2025-10-12 09:05:53] 2025-10-12 13:05:21,653 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:05:53] 2025-10-12 13:05:21,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:05:53] 2025-10-12 13:05:21,660 | INFO     | did not find any defunct processes belonging to 3996055
[2025-10-12 09:05:53] 2025-10-12 13:05:21,667 | INFO     | did not find any defunct processes belonging to 3996055
[2025-10-12 09:05:53] 2025-10-12 13:05:21,668 | INFO     | ready for new job
[2025-10-12 09:05:53] 2025-10-12 13:05:21,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:05:53] 2025-10-12 13:05:21,669 | INFO     | ***************************************
[2025-10-12 09:05:53] 2025-10-12 13:05:21,669 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:05:53] 2025-10-12 13:05:21,669 | INFO     | ***************************************
[2025-10-12 09:05:53] 2025-10-12 13:05:21,670 | INFO     | 
[2025-10-12 09:05:53] 2025-10-12 13:05:21,672 | INFO     | architecture information:
[2025-10-12 09:05:53] 2025-10-12 13:05:21,672 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:05:53] 2025-10-12 13:05:21,685 | INFO     | cat /etc/os-release:
[2025-10-12 09:05:53] NAME="CentOS Linux"
[2025-10-12 09:05:53] VERSION="7 (Core)"
[2025-10-12 09:05:53] ID="centos"
[2025-10-12 09:05:53] ID_LIKE="rhel fedora"
[2025-10-12 09:05:53] VERSION_ID="7"
[2025-10-12 09:05:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:05:53] ANSI_COLOR="0;31"
[2025-10-12 09:05:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:05:53] HOME_URL="https://www.centos.org/"
[2025-10-12 09:05:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:05:53] 
[2025-10-12 09:05:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:05:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:05:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:05:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:05:53] 
[2025-10-12 09:05:53] 2025-10-12 13:05:21,686 | INFO     | ***************************************
[2025-10-12 09:05:53] 2025-10-12 13:05:22,189 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 09:05:53] 2025-10-12 13:05:22,205 | INFO     | sufficient remaining disk space (399485435904 B)
[2025-10-12 09:05:53] 2025-10-12 13:05:22,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:05:53] 2025-10-12 13:05:22,205 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:05:53] 2025-10-12 13:05:22,206 | INFO     | update_server=False
[2025-10-12 09:05:53] 2025-10-12 13:05:22,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:05:53] 2025-10-12 13:05:22,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 13:05:22,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 13:05:22,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 13:05:22,329 | INFO     | all payload control threads have been joined
[2025-10-12 09:05:53] 2025-10-12 13:05:22,781 | INFO     | all job control threads have been joined
[2025-10-12 09:05:53] 2025-10-12 13:05:22,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:05:53] 2025-10-12 13:05:22,833 | INFO     | aborting loop
[2025-10-12 09:05:53] 2025-10-12 13:05:23,169 | INFO     | all data control threads have been joined
[2025-10-12 09:05:53] 2025-10-12 13:05:23,211 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:23,211 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:23,331 | INFO     | [payload] control thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:23,695 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:23,784 | INFO     | [job] control thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:23,837 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:23,977 | INFO     | [job] validate thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,039 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,175 | INFO     | [data] control thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,211 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,279 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,385 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,486 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:24,680 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:26,212 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:33,141 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:05:53] 2025-10-12 13:05:34,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:05:53] 2025-10-12 13:05:45,126 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:05:53] 2025-10-12 13:05:46,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788745086784)>', '<ExcThread(monitor, started 139788191508224)>']
[2025-10-12 09:05:53] 2025-10-12 13:05:51,659 | INFO     | all workflow threads have been joined
[2025-10-12 09:05:53] 2025-10-12 13:05:51,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:05:53] 2025-10-12 13:05:51,660 | INFO     | traces error code: 0
[2025-10-12 09:05:53] 2025-10-12 13:05:51,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:05:53] 2025-10-12 13:05:52,804 | INFO     | PID=3988891 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:05:53] 2025-10-12 13:05:52,805 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:05:53] 2025-10-12 13:05:52,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:05:53] 2025-10-12 13:05:52,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:05:53] 2025-10-12 13:05:52,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:05:53] 2025-10-12 13:05:52,806 | INFO     | [monitor] control thread has ended
[2025-10-12 09:05:53] 2025-10-12 13:05:52,949 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:05:53] 2025-10-12 13:05:52,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:05:53] 2025-10-12 13:05:52,955 [wrapper] pilotpid: 3988891
[2025-10-12 09:05:53] 2025-10-12 13:05:52,957 [wrapper] Pilot exit status: 0
[2025-10-12 09:05:53] 2025-10-12 13:05:52,965 [wrapper] pandaids: 6839865971
[2025-10-12 09:05:53] 2025-10-12 13:05:53,012 [wrapper] cleanup supervisor_pilot 4074255 3988892
[2025-10-12 09:05:53] 2025-10-12 13:05:53,014 [wrapper] Test setup, not cleaning
[2025-10-12 09:05:53] 2025-10-12 13:05:53,017 [wrapper] apfmon messages muted
[2025-10-12 09:05:53] 2025-10-12 13:05:53,019 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:05:53] 2025-10-12 13:05:53,021 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:05:53]  *** Error codes and diagnostics ***
[2025-10-12 09:05:53]     "exeErrorCode": 0,
[2025-10-12 09:05:53]     "exeErrorDiag": "",
[2025-10-12 09:05:53]     "pilotErrorCode": 0,
[2025-10-12 09:05:53]     "pilotErrorDiag": "",
[2025-10-12 09:05:53]  *** Listing of results directory ***
[2025-10-12 09:05:53] total 406672
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 09:05:53] -rwx------ 1 boinc boinc     36292 Oct 12 06:05 runpilot2-wrapper.sh
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:05 queuedata.json
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       100 Oct 12 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:05:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 07:58 run_atlas
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       105 Oct 12 07:58 job.xml
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc 219622154 Oct 12 07:58 EVNT.46676267._003602.pool.root.1
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc    569678 Oct 12 07:58 input.tar.gz
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:58 start_atlas.sh
[2025-10-12 09:05:53] drwxrwx--x 1 boinc boinc        76 Oct 12 07:58 shared
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:58 boinc_setup_complete
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      9181 Oct 12 07:58 init_data.xml
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 07:58 boinc_lockfile
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      2550 Oct 12 07:58 pandaJob.out
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    975520 Oct 12 07:58 agis_schedconf.cvmfs.json
[2025-10-12 09:05:53] -rw------- 1 boinc boinc   1560580 Oct 12 07:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:05:53] drwx------ 1 boinc boinc       414 Oct 12 07:58 pilot3
[2025-10-12 09:05:53] -rw------- 1 boinc boinc 190990347 Oct 12 09:04 HITS.46676269._075706.pool.root.1
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       529 Oct 12 09:04 boinc_task_state.xml
[2025-10-12 09:05:53] -rw------- 1 boinc boinc      1034 Oct 12 09:05 memory_monitor_summary.json
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    381118 Oct 12 09:05 log.46676269._075706.job.log.tgz.1
[2025-10-12 09:05:53] -rw------- 1 boinc boinc      7836 Oct 12 09:05 heartbeat.json
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:05 wrapper_checkpoint.txt
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:05 boinc_mmap_file
[2025-10-12 09:05:53] -rw------- 1 boinc boinc       747 Oct 12 09:05 pilotlog.txt
[2025-10-12 09:05:53] -rw------- 1 boinc boinc        95 Oct 12 09:05 pilot_heartbeat.json
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    587480 Oct 12 09:05 log.46676269._075706.job.log.1
[2025-10-12 09:05:53] -rw------- 1 boinc boinc       357 Oct 12 09:05 output.list
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:05 runtime_log
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    983040 Oct 12 09:05 result.tar.gz
[2025-10-12 09:05:53] -rw------- 1 boinc boinc       674 Oct 12 09:05 ssKNDmd87R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJcTMDmDisjwn.diag
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc      8790 Oct 12 09:05 runtime_log.err
[2025-10-12 09:05:53] -rw-r--r-- 1 boinc boinc     22614 Oct 12 09:05 stderr.txt
[2025-10-12 09:05:53] HITS file was successfully produced:
[2025-10-12 09:05:53] -rw------- 1 boinc boinc 190990347 Oct 12 09:04 shared/HITS.pool.root.1
[2025-10-12 09:05:53]  *** Contents of shared directory: ***
[2025-10-12 09:05:53] total 402528
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc 219622154 Oct 12 07:58 ATLAS.root_0
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc    569678 Oct 12 07:58 input.tar.gz
[2025-10-12 09:05:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 07:58 start_atlas.sh
[2025-10-12 09:05:53] -rw------- 1 boinc boinc 190990347 Oct 12 09:04 HITS.pool.root.1
[2025-10-12 09:05:53] -rw------- 1 boinc boinc    983040 Oct 12 09:05 result.tar.gz
09:05:55 (3984183): run_atlas exited; CPU time 41710.762396
09:05:55 (3984183): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN