Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:37:11 (2236824): wrapper (7.7.26015): starting
22:37:11 (2236824): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 22:37:11] Arguments: --nthreads 12
[2025-10-12 22:37:11] Threads: 12
[2025-10-12 22:37:11] Checking for CVMFS
[2025-10-12 22:37:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:37:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:37:12] 2.13.2.0 8216 25384 243384 151636 1 160 28279837 46080000 50883 130560 0 172405815 99.895 48220429 22638 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 22:37:12] CVMFS is ok
[2025-10-12 22:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:37:12] Further information can be found at the LHC@home message board.
[2025-10-12 22:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:37:12] Checking for apptainer binary...
[2025-10-12 22:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:37:12] Running /usr/bin/apptainer --version
[2025-10-12 22:37:12] apptainer version 1.4.2-1.el9
[2025-10-12 22:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:37:13] mff2103.farm.particle.cz
[2025-10-12 22:37:13] apptainer works
[2025-10-12 22:37:13] Set ATHENA_PROC_NUMBER=12
[2025-10-12 22:37:13] Set ATHENA_CORE_NUMBER=12
[2025-10-12 22:37:13] Starting ATLAS job with PandaID=6838989017
[2025-10-12 22:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:40:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:40:33] 2025-10-12 21:37:46,284 | INFO     | preparing for final server update for job 6838989017 in state='finished'
[2025-10-12 23:40:33] 2025-10-12 21:37:46,284 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:40:33] 2025-10-12 21:37:46,284 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:40:33] 2025-10-12 21:37:46,284 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:40:33] 2025-10-12 21:37:46,285 | INFO     | job 6838989017 has finished - writing final server update
[2025-10-12 23:40:33] 2025-10-12 21:37:46,285 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:40:33] 2025-10-12 21:37:46,297 | INFO     | executing command: lscpu
[2025-10-12 23:40:33] 2025-10-12 21:37:46,474 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:40:33] 2025-10-12 21:37:46,631 | INFO     | time since job start (3606s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:37:48,546 | INFO     | monitor loop #255: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:37:48,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:37:48,637 | INFO     | time since job start (3608s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:37:50,643 | INFO     | time since job start (3610s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:37:51,051 | INFO     | monitor loop #256: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:37:51,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:37:52,650 | INFO     | time since job start (3612s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:37:53,556 | INFO     | monitor loop #257: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:37:53,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:37:54,473 | INFO     | PID=2249220 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 23:40:33] 2025-10-12 21:37:54,473 | INFO     | .. there are 81 such processes running
[2025-10-12 23:40:33] 2025-10-12 21:37:55,474 | INFO     | time since job start (3615s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:37:56,060 | INFO     | monitor loop #258: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:37:56,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:37:57,481 | INFO     | time since job start (3617s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:37:58,565 | INFO     | monitor loop #259: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:37:58,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:37:59,487 | INFO     | time since job start (3619s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:38:01,069 | INFO     | monitor loop #260: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:38:01,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:38:01,494 | INFO     | time since job start (3621s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:38:03,501 | INFO     | time since job start (3623s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:38:03,575 | INFO     | monitor loop #261: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:38:03,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:38:05,507 | INFO     | time since job start (3625s) is within the limit (172800.0s)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,081 | INFO     | monitor loop #262: job 0:6838989017 is in state 'finished'
[2025-10-12 23:40:33] 2025-10-12 21:38:06,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,132 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:40:33] 2025-10-12 21:38:06,149 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2927.214052083334
[2025-10-12 23:40:33] 2025-10-12 21:38:06,166 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6838989017/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,166 | INFO     | extracted standard info from prmon json
[2025-10-12 23:40:33] 2025-10-12 21:38:06,166 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:40:33] 2025-10-12 21:38:06,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:40:33] 2025-10-12 21:38:06,167 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:40:33] 2025-10-12 21:38:06,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:40:33] 2025-10-12 21:38:06,168 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:40:33] 2025-10-12 21:38:06,168 | INFO     | sum of square deviations: 41117050.0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | sum of deviations: -1625209641.0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | mean x: 1760303358.0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | mean y: 2770668.0196078434
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | -- intersect: 69581254253.44887
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | intersect: 69581254253.44887
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | chi2: 0.013693477499148402
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | -- intersect: 69581254253.44887
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | current memory leak: -39.53 B/s (using 51 data points, chi2=0.01)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,169 | INFO     | could have reported an average CPU frequency of 2921 MHz (5 samples)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | ..............................
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . Timing measurements:
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . get job = 0 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . initial setup = 1 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . payload setup = 16 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . stage-in = 0 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . payload execution = 3544 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . stage-out = 1 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | . log creation = 0 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,170 | INFO     | ..............................
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | 
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | job summary report
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | --------------------------------------------------
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | PanDA job id: 6838989017
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | task id: 46676269
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | errors: (none)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | pilot state: finished 
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | transexitcode: 0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | exeerrorcode: 0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | exeerrordiag: 
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | exitcode: 0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | exitmsg: OK
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | cpuconsumptiontime: 36836 s
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | nevents: 400
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | neventsw: 0
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | pid: 2271069
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | pgrp: 2271069
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | corecount: 12
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | event service: False
[2025-10-12 23:40:33] 2025-10-12 21:38:06,252 | INFO     | sizes: {0: 2348857, 1: 2348885, 11: 2348885, 15: 2349175, 22: 2349203, 3564: 2375068, 3566: 2384068, 3569: 2384124, 3589: 2384350}
[2025-10-12 23:40:33] 2025-10-12 21:38:06,253 | INFO     | --------------------------------------------------
[2025-10-12 23:40:33] 2025-10-12 21:38:06,253 | INFO     | 
[2025-10-12 23:40:33] 2025-10-12 21:38:06,253 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-10-12 23:40:33] 2025-10-12 21:38:06,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | job 6838989017 has completed (purged errors)
[2025-10-12 23:40:33] 2025-10-12 21:38:06,296 | INFO     | overall cleanup function is called
[2025-10-12 23:40:33] 2025-10-12 21:38:07,306 | INFO     | --- collectZombieJob: --- 10, [2271069]
[2025-10-12 23:40:33] 2025-10-12 21:38:07,307 | INFO     | zombie collector waiting for pid 2271069
[2025-10-12 23:40:33] 2025-10-12 21:38:07,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:40:33] 2025-10-12 21:38:07,307 | INFO     | collected zombie processes
[2025-10-12 23:40:33] 2025-10-12 21:38:07,307 | INFO     | will attempt to kill all subprocesses of pid=2271069
[2025-10-12 23:40:33] 2025-10-12 21:38:07,874 | INFO     | process IDs to be killed: [2271069] (in reverse order)
[2025-10-12 23:40:33] 2025-10-12 21:38:08,124 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:40:33] 2025-10-12 21:38:08,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:40:33] 2025-10-12 21:38:08,152 | INFO     | did not find any defunct processes belonging to 2271069
[2025-10-12 23:40:33] 2025-10-12 21:38:08,179 | INFO     | did not find any defunct processes belonging to 2271069
[2025-10-12 23:40:33] 2025-10-12 21:38:08,179 | INFO     | ready for new job
[2025-10-12 23:40:33] 2025-10-12 21:38:08,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:40:33] 2025-10-12 21:38:08,181 | INFO     | ***************************************
[2025-10-12 23:40:33] 2025-10-12 21:38:08,181 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:40:33] 2025-10-12 21:38:08,181 | INFO     | ***************************************
[2025-10-12 23:40:33] 2025-10-12 21:38:08,181 | INFO     | 
[2025-10-12 23:40:33] 2025-10-12 21:38:08,187 | INFO     | architecture information:
[2025-10-12 23:40:33] 2025-10-12 21:38:08,187 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:40:33] 2025-10-12 21:38:08,208 | INFO     | cat /etc/os-release:
[2025-10-12 23:40:33] NAME="CentOS Linux"
[2025-10-12 23:40:33] VERSION="7 (Core)"
[2025-10-12 23:40:33] ID="centos"
[2025-10-12 23:40:33] ID_LIKE="rhel fedora"
[2025-10-12 23:40:33] VERSION_ID="7"
[2025-10-12 23:40:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:40:33] ANSI_COLOR="0;31"
[2025-10-12 23:40:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:40:33] HOME_URL="https://www.centos.org/"
[2025-10-12 23:40:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:40:33] 
[2025-10-12 23:40:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:40:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:40:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:40:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:40:33] 
[2025-10-12 23:40:33] 2025-10-12 21:38:08,208 | INFO     | ***************************************
[2025-10-12 23:40:33] 2025-10-12 21:38:08,711 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-10-12 23:40:33] 2025-10-12 21:38:08,773 | INFO     | sufficient remaining disk space (1661745496064 B)
[2025-10-12 23:40:33] 2025-10-12 21:38:08,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:40:33] 2025-10-12 21:38:08,777 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:40:33] 2025-10-12 21:38:08,777 | INFO     | update_server=False
[2025-10-12 23:40:33] 2025-10-12 21:38:08,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:40:33] 2025-10-12 21:38:08,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:40:33] 2025-10-12 21:38:09,177 | INFO     | all job control threads have been joined
[2025-10-12 23:40:33] 2025-10-12 21:38:09,285 | INFO     | all data control threads have been joined
[2025-10-12 23:40:33] 2025-10-12 21:38:09,535 | INFO     | all payload control threads have been joined
[2025-10-12 23:40:33] 2025-10-12 21:38:09,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:40:33] 2025-10-12 21:38:09,590 | INFO     | aborting loop
[2025-10-12 23:40:33] 2025-10-12 21:38:09,782 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:09,826 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:09,833 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,182 | INFO     | [job] control thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,292 | INFO     | [data] control thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:40:33] 2025-10-12 21:38:10,542 | INFO     | [payload] control thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,596 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,712 | INFO     | [job] validate thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,785 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,830 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,833 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:10,953 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:11,004 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:11,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:40:33] 2025-10-12 21:38:12,270 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:14,331 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:40:33] 2025-10-12 21:38:39,311 | INFO     | PID=2249220 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:40:33] 2025-10-12 21:38:39,312 | INFO     | .. there are 81 such processes running
[2025-10-12 23:40:33] 2025-10-12 21:38:39,312 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:40:33] 2025-10-12 21:38:39,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:40:33] 2025-10-12 21:38:39,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:40:33] 2025-10-12 21:38:46,472 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:40:33] 2025-10-12 21:38:46,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863111538496)>', '<ExcThread(monitor, started 139862304872192)>']
[2025-10-12 23:40:33] 2025-10-12 21:38:47,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:40:33] 2025-10-12 21:38:47,358 | INFO     | [monitor] control thread has ended
[2025-10-12 23:40:33] 2025-10-12 21:38:51,816 | INFO     | all workflow threads have been joined
[2025-10-12 23:40:33] 2025-10-12 21:38:51,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:40:33] 2025-10-12 21:38:51,816 | INFO     | traces error code: 0
[2025-10-12 23:40:33] 2025-10-12 21:38:51,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:40:33] 2025-10-12 21:38:52,039 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:40:33] 2025-10-12 21:38:52,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:40:33] 2025-10-12 21:38:52,068 [wrapper] pilotpid: 2249220
[2025-10-12 23:40:33] 2025-10-12 21:38:52,078 [wrapper] Pilot exit status: 0
[2025-10-12 23:40:33] 2025-10-12 21:38:52,126 [wrapper] pandaids: 6838989017
[2025-10-12 23:40:33] 2025-10-12 21:38:52,338 [wrapper] cleanup supervisor_pilot 2385598 2249221
[2025-10-12 23:40:33] 2025-10-12 21:38:52,344 [wrapper] Test setup, not cleaning
[2025-10-12 23:40:33] 2025-10-12 21:38:52,347 [wrapper] apfmon messages muted
[2025-10-12 23:40:33] 2025-10-12 21:38:52,350 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:40:33] 2025-10-12 21:38:52,353 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:40:33]  *** Error codes and diagnostics ***
[2025-10-12 23:40:33]     "exeErrorCode": 0,
[2025-10-12 23:40:33]     "exeErrorDiag": "",
[2025-10-12 23:40:33]     "pilotErrorCode": 0,
[2025-10-12 23:40:33]     "pilotErrorDiag": "",
[2025-10-12 23:40:33]  *** Listing of results directory ***
[2025-10-12 23:40:33] total 416292
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc    557409 Oct 11 23:13 pilot3.tar.gz
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:29 queuedata.json
[2025-10-12 23:40:33] -rwx------ 1 boinc boinc     36292 Oct 11 23:30 runpilot2-wrapper.sh
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:40:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:37 run_atlas
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:37 job.xml
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc      6665 Oct 12 22:37 init_data.xml
[2025-10-12 23:40:33] -rw-r--r-- 2 boinc boinc 220828428 Oct 12 22:37 EVNT.46676267._002623.pool.root.1
[2025-10-12 23:40:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:37 start_atlas.sh
[2025-10-12 23:40:33] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:37 shared
[2025-10-12 23:40:33] -rw-r--r-- 2 boinc boinc    569684 Oct 12 22:37 input.tar.gz
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:37 boinc_lockfile
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc      2549 Oct 12 22:37 pandaJob.out
[2025-10-12 23:40:33] -rw------- 1 boinc boinc    975536 Oct 12 22:37 agis_schedconf.cvmfs.json
[2025-10-12 23:40:33] -rw------- 1 boinc boinc   1560580 Oct 12 22:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:40:33] drwx------ 5 boinc boinc      4096 Oct 12 22:37 pilot3
[2025-10-12 23:40:33] -rw------- 1 boinc boinc 199718325 Oct 12 23:37 HITS.46676269._065332.pool.root.1
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc       527 Oct 12 23:37 boinc_task_state.xml
[2025-10-12 23:40:33] -rw------- 1 boinc boinc      1016 Oct 12 23:37 memory_monitor_summary.json
[2025-10-12 23:40:33] -rw------- 1 boinc boinc        95 Oct 12 23:37 pilot_heartbeat.json
[2025-10-12 23:40:33] -rw------- 1 boinc boinc    383953 Oct 12 23:37 log.46676269._065332.job.log.tgz.1
[2025-10-12 23:40:33] -rw------- 1 boinc boinc      7779 Oct 12 23:38 heartbeat.json
[2025-10-12 23:40:33] -rw------- 1 boinc boinc      4827 Oct 12 23:38 pilotlog.txt
[2025-10-12 23:40:33] -rw------- 1 boinc boinc    531280 Oct 12 23:38 log.46676269._065332.job.log.1
[2025-10-12 23:40:33] -rw------- 1 boinc boinc       357 Oct 12 23:38 output.list
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:38 runtime_log
[2025-10-12 23:40:33] -rw------- 1 boinc boinc    931840 Oct 12 23:38 result.tar.gz
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc      8764 Oct 12 23:38 runtime_log.err
[2025-10-12 23:40:33] -rw------- 1 boinc boinc       664 Oct 12 23:38 D5tNDm1LwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUghNDmMGLogm.diag
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc        25 Oct 12 23:40 wrapper_checkpoint.txt
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:40 boinc_mmap_file
[2025-10-12 23:40:33] -rw-r--r-- 1 boinc boinc     22337 Oct 12 23:40 stderr.txt
[2025-10-12 23:40:33] HITS file was successfully produced:
[2025-10-12 23:40:33] -rw------- 1 boinc boinc 199718325 Oct 12 23:37 shared/HITS.pool.root.1
[2025-10-12 23:40:33]  *** Contents of shared directory: ***
[2025-10-12 23:40:33] total 412192
[2025-10-12 23:40:33] -rw-r--r-- 2 boinc boinc 220828428 Oct 12 22:37 ATLAS.root_0
[2025-10-12 23:40:33] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:37 start_atlas.sh
[2025-10-12 23:40:33] -rw-r--r-- 2 boinc boinc    569684 Oct 12 22:37 input.tar.gz
[2025-10-12 23:40:33] -rw------- 1 boinc boinc 199718325 Oct 12 23:37 HITS.pool.root.1
[2025-10-12 23:40:33] -rw------- 1 boinc boinc    931840 Oct 12 23:38 result.tar.gz
23:40:35 (2236824): run_atlas exited; CPU time 36994.579802
23:40:35 (2236824): called boinc_finish(0)

</stderr_txt>
]]>

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