Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:00:19 (27172): wrapper (7.7.26015): starting
08:00:19 (27172): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 08:00:19] Arguments: --nthreads 12
[2025-10-12 08:00:19] Threads: 12
[2025-10-12 08:00:19] Checking for CVMFS
[2025-10-12 08:00:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:00:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:00:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:00:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:00:20] 2.11.2.0 2914 222854 97628 151619 0 57 15569163 20275201 1 130560 1 108431903 99.983 13254289 12346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:00:20] CVMFS is ok
[2025-10-12 08:00:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:00:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:00:20] Further information can be found at the LHC@home message board.
[2025-10-12 08:00:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:00:20] Checking for apptainer binary...
[2025-10-12 08:00:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:00:20] Running /usr/bin/apptainer --version
[2025-10-12 08:00:20] apptainer version 1.3.2-1.el7
[2025-10-12 08:00:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:00:21] c-205-5.aglt2.org
[2025-10-12 08:00:21] apptainer works
[2025-10-12 08:00:21] Set ATHENA_PROC_NUMBER=12
[2025-10-12 08:00:21] Set ATHENA_CORE_NUMBER=12
[2025-10-12 08:00:22] Starting ATLAS job with PandaID=6839637077
[2025-10-12 08:00:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:15:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:15:49]  status=None
[2025-10-12 09:15:49]  status_code=0
[2025-10-12 09:15:49]  storage_token=
[2025-10-12 09:15:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839637077/log.46676269._073335.job.log.tgz.1
[2025-10-12 09:15:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/2a/log.46676269._073335.job.log.tgz.1
[2025-10-12 09:15:49]  workdir=None
[2025-10-12 09:15:49] ]
[2025-10-12 09:15:49] 2025-10-12 13:15:01,462 | INFO     | transferring file log.46676269._073335.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839637077/log.46676269._073335.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 09:15:49] 2025-10-12 13:15:01,462 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839637077/log.46676269._073335.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._073335.job
[2025-10-12 09:15:49] 2025-10-12 13:15:01,485 | INFO     | adding to output.list: log.46676269._073335.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/2a/log.46676269._073335.job.log.tg
[2025-10-12 09:15:49] 2025-10-12 13:15:01,486 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 09:15:49] 2025-10-12 13:15:01,486 | INFO     | summary of transferred files:
[2025-10-12 09:15:49] 2025-10-12 13:15:01,486 | INFO     |  -- lfn=log.46676269._073335.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 09:15:49] 2025-10-12 13:15:01,487 | INFO     | stage-out finished correctly
[2025-10-12 09:15:49] 2025-10-12 13:15:03,222 | INFO     | time since job start (4466s) is within the limit (172800.0s)
[2025-10-12 09:15:49] 2025-10-12 13:15:03,363 | INFO     | monitor loop #336: job 0:6839637077 is in state 'finished'
[2025-10-12 09:15:49] 2025-10-12 13:15:03,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:15:49] 2025-10-12 13:15:03,852 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 09:15:49] 2025-10-12 13:15:03,933 | INFO     | job 6839637077 has state=finished
[2025-10-12 09:15:49] 2025-10-12 13:15:03,933 | INFO     | preparing for final server update for job 6839637077 in state='finished'
[2025-10-12 09:15:49] 2025-10-12 13:15:03,991 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 09:15:49] 2025-10-12 13:15:03,992 | INFO     | this job has now completed (state=finished)
[2025-10-12 09:15:49] 2025-10-12 13:15:03,992 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 09:15:49] 2025-10-12 13:15:03,992 | INFO     | log transfer has been attempted: DONE
[2025-10-12 09:15:49] 2025-10-12 13:15:03,992 | INFO     | job 6839637077 has finished - writing final server update
[2025-10-12 09:15:49] 2025-10-12 13:15:03,992 | INFO     | total number of processed events: 400 (read)
[2025-10-12 09:15:49] 2025-10-12 13:15:03,993 | INFO     | executing command: lscpu
[2025-10-12 09:15:49] 2025-10-12 13:15:04,020 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 09:15:49] 2025-10-12 13:15:05,228 | INFO     | time since job start (4468s) is within the limit (172800.0s)
[2025-10-12 09:15:49] 2025-10-12 13:15:05,876 | INFO     | monitor loop #337: job 0:6839637077 is in state 'finished'
[2025-10-12 09:15:49] 2025-10-12 13:15:05,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:15:49] 2025-10-12 13:15:07,233 | INFO     | time since job start (4470s) is within the limit (172800.0s)
[2025-10-12 09:15:49] 2025-10-12 13:15:08,380 | INFO     | monitor loop #338: job 0:6839637077 is in state 'finished'
[2025-10-12 09:15:49] 2025-10-12 13:15:08,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:15:49] 2025-10-12 13:15:09,238 | INFO     | time since job start (4472s) is within the limit (172800.0s)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,180 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 09:15:49] 2025-10-12 13:15:10,184 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 09:15:49] 2025-10-12 13:15:10,187 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839637077/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,188 | INFO     | extracted standard info from prmon json
[2025-10-12 09:15:49] 2025-10-12 13:15:10,188 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:15:49] 2025-10-12 13:15:10,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:15:49] 2025-10-12 13:15:10,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:15:49] 2025-10-12 13:15:10,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:15:49] 2025-10-12 13:15:10,190 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:15:49] 2025-10-12 13:15:10,191 | INFO     | sum of square deviations: 89127252.5
[2025-10-12 09:15:49] 2025-10-12 13:15:10,191 | INFO     | sum of deviations: -2277136466.0
[2025-10-12 09:15:49] 2025-10-12 13:15:10,191 | INFO     | mean x: 1760272753.5
[2025-10-12 09:15:49] 2025-10-12 13:15:10,191 | INFO     | mean y: 2699541.9696969697
[2025-10-12 09:15:49] 2025-10-12 13:15:10,191 | INFO     | -- intersect: 44976387888.315605
[2025-10-12 09:15:49] 2025-10-12 13:15:10,191 | INFO     | intersect: 44976387888.315605
[2025-10-12 09:15:49] 2025-10-12 13:15:10,192 | INFO     | chi2: 0.04225009818603008
[2025-10-12 09:15:49] 2025-10-12 13:15:10,192 | INFO     | -- intersect: 44976387888.315605
[2025-10-12 09:15:49] 2025-10-12 13:15:10,192 | INFO     | current memory leak: -25.55 B/s (using 66 data points, chi2=0.04)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,192 | INFO     | could have reported an average CPU frequency of 2030 MHz (6 samples)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,192 | INFO     | ..............................
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . Timing measurements:
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . get job = 0 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . initial setup = 2 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . payload setup = 7 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . stage-in = 0 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . payload execution = 4436 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . stage-out = 0 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | . log creation = 0 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,193 | INFO     | ..............................
[2025-10-12 09:15:49] 2025-10-12 13:15:10,364 | INFO     | 
[2025-10-12 09:15:49] 2025-10-12 13:15:10,364 | INFO     | job summary report
[2025-10-12 09:15:49] 2025-10-12 13:15:10,364 | INFO     | --------------------------------------------------
[2025-10-12 09:15:49] 2025-10-12 13:15:10,364 | INFO     | PanDA job id: 6839637077
[2025-10-12 09:15:49] 2025-10-12 13:15:10,364 | INFO     | task id: 46676269
[2025-10-12 09:15:49] 2025-10-12 13:15:10,364 | INFO     | errors: (none)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:15:49] 2025-10-12 13:15:10,365 | INFO     | pilot state: finished 
[2025-10-12 09:15:49] 2025-10-12 13:15:10,365 | INFO     | transexitcode: 0
[2025-10-12 09:15:49] 2025-10-12 13:15:10,365 | INFO     | exeerrorcode: 0
[2025-10-12 09:15:49] 2025-10-12 13:15:10,365 | INFO     | exeerrordiag: 
[2025-10-12 09:15:49] 2025-10-12 13:15:10,365 | INFO     | exitcode: 0
[2025-10-12 09:15:49] 2025-10-12 13:15:10,366 | INFO     | exitmsg: OK
[2025-10-12 09:15:49] 2025-10-12 13:15:10,366 | INFO     | cpuconsumptiontime: 46014 s
[2025-10-12 09:15:49] 2025-10-12 13:15:10,366 | INFO     | nevents: 400
[2025-10-12 09:15:49] 2025-10-12 13:15:10,366 | INFO     | neventsw: 0
[2025-10-12 09:15:49] 2025-10-12 13:15:10,366 | INFO     | pid: 4947
[2025-10-12 09:15:49] 2025-10-12 13:15:10,366 | INFO     | pgrp: 4947
[2025-10-12 09:15:49] 2025-10-12 13:15:10,367 | INFO     | corecount: 12
[2025-10-12 09:15:49] 2025-10-12 13:15:10,367 | INFO     | event service: False
[2025-10-12 09:15:49] 2025-10-12 13:15:10,367 | INFO     | sizes: {0: 2348856, 5: 2349118, 11: 2349174, 4446: 2375250, 4447: 2375249, 4448: 2384303, 4450: 2384487, 4456: 2384681}
[2025-10-12 09:15:49] 2025-10-12 13:15:10,367 | INFO     | --------------------------------------------------
[2025-10-12 09:15:49] 2025-10-12 13:15:10,367 | INFO     | 
[2025-10-12 09:15:49] 2025-10-12 13:15:10,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:15:49] 2025-10-12 13:15:10,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,395 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:15:49] 2025-10-12 13:15:10,398 | INFO     | job 6839637077 has completed (purged errors)
[2025-10-12 09:15:49] 2025-10-12 13:15:10,398 | INFO     | overall cleanup function is called
[2025-10-12 09:15:49] 2025-10-12 13:15:11,406 | INFO     | --- collectZombieJob: --- 10, [4947]
[2025-10-12 09:15:49] 2025-10-12 13:15:11,406 | INFO     | zombie collector waiting for pid 4947
[2025-10-12 09:15:49] 2025-10-12 13:15:11,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:15:49] 2025-10-12 13:15:11,406 | INFO     | collected zombie processes
[2025-10-12 09:15:49] 2025-10-12 13:15:11,406 | INFO     | will attempt to kill all subprocesses of pid=4947
[2025-10-12 09:15:49] 2025-10-12 13:15:11,494 | INFO     | process IDs to be killed: [4947] (in reverse order)
[2025-10-12 09:15:49] 2025-10-12 13:15:11,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:15:49] 2025-10-12 13:15:11,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:15:49] 2025-10-12 13:15:11,548 | INFO     | did not find any defunct processes belonging to 4947
[2025-10-12 09:15:49] 2025-10-12 13:15:11,551 | INFO     | did not find any defunct processes belonging to 4947
[2025-10-12 09:15:49] 2025-10-12 13:15:11,551 | INFO     | ready for new job
[2025-10-12 09:15:49] 2025-10-12 13:15:11,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:15:49] 2025-10-12 13:15:11,552 | INFO     | ***************************************
[2025-10-12 09:15:49] 2025-10-12 13:15:11,552 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:15:49] 2025-10-12 13:15:11,552 | INFO     | ***************************************
[2025-10-12 09:15:49] 2025-10-12 13:15:11,552 | INFO     | 
[2025-10-12 09:15:49] 2025-10-12 13:15:11,553 | INFO     | architecture information:
[2025-10-12 09:15:49] 2025-10-12 13:15:11,553 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:15:49] 2025-10-12 13:15:11,568 | INFO     | cat /etc/os-release:
[2025-10-12 09:15:49] NAME="CentOS Linux"
[2025-10-12 09:15:49] VERSION="7 (Core)"
[2025-10-12 09:15:49] ID="centos"
[2025-10-12 09:15:49] ID_LIKE="rhel fedora"
[2025-10-12 09:15:49] VERSION_ID="7"
[2025-10-12 09:15:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:15:49] ANSI_COLOR="0;31"
[2025-10-12 09:15:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:15:49] HOME_URL="https://www.centos.org/"
[2025-10-12 09:15:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:15:49] 
[2025-10-12 09:15:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:15:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:15:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:15:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:15:49] 
[2025-10-12 09:15:49] 2025-10-12 13:15:11,568 | INFO     | ***************************************
[2025-10-12 09:15:49] 2025-10-12 13:15:12,071 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:15:49] 2025-10-12 13:15:12,088 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-10-12 09:15:49] 2025-10-12 13:15:12,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:15:49] 2025-10-12 13:15:12,089 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:15:49] 2025-10-12 13:15:12,089 | INFO     | update_server=False
[2025-10-12 09:15:49] 2025-10-12 13:15:12,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:15:49] 2025-10-12 13:15:12,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:15:49] 2025-10-12 13:15:12,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:15:49] 2025-10-12 13:15:12,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:15:49] 2025-10-12 13:15:12,091 | INFO     | aborting loop
[2025-10-12 09:15:49] 2025-10-12 13:15:12,451 | INFO     | all data control threads have been joined
[2025-10-12 09:15:49] 2025-10-12 13:15:12,923 | INFO     | all payload control threads have been joined
[2025-10-12 09:15:49] 2025-10-12 13:15:13,095 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,096 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,096 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,133 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,238 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,310 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,456 | INFO     | [data] control thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,569 | INFO     | all job control threads have been joined
[2025-10-12 09:15:49] 2025-10-12 13:15:13,792 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,928 | INFO     | [payload] control thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:13,976 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:14,095 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:14,366 | INFO     | [job] validate thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:14,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:15:49] 2025-10-12 13:15:14,536 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:14,575 | INFO     | [job] control thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:18,447 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:23,021 | INFO     | job.realtimelogging is not enabled
[2025-10-12 09:15:49] 2025-10-12 13:15:24,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:15:49] 2025-10-12 13:15:34,646 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 09:15:49] 2025-10-12 13:15:42,441 | INFO     | PID=30846 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 09:15:49] 2025-10-12 13:15:42,442 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:15:49] 2025-10-12 13:15:42,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:15:49] 2025-10-12 13:15:42,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:15:49] 2025-10-12 13:15:44,011 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:15:49] 2025-10-12 13:15:44,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860377106240)>', '<ExcThread(monitor, started 139859410798336)>']
[2025-10-12 09:15:49] 2025-10-12 13:15:44,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:15:49] 2025-10-12 13:15:44,453 | INFO     | [monitor] control thread has ended
[2025-10-12 09:15:49] 2025-10-12 13:15:49,331 | INFO     | all workflow threads have been joined
[2025-10-12 09:15:49] 2025-10-12 13:15:49,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:15:49] 2025-10-12 13:15:49,332 | INFO     | traces error code: 0
[2025-10-12 09:15:49] 2025-10-12 13:15:49,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:15:49] 2025-10-12 13:15:49,416 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:15:49] 2025-10-12 13:15:49,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:15:49] 2025-10-12 13:15:49,423 [wrapper] pilotpid: 30846
[2025-10-12 09:15:49] 2025-10-12 13:15:49,427 [wrapper] Pilot exit status: 0
[2025-10-12 09:15:49] 2025-10-12 13:15:49,442 [wrapper] pandaids: 6839637077
[2025-10-12 09:15:49] 2025-10-12 13:15:49,481 [wrapper] cleanup supervisor_pilot 19377 30847
[2025-10-12 09:15:49] 2025-10-12 13:15:49,485 [wrapper] Test setup, not cleaning
[2025-10-12 09:15:49] 2025-10-12 13:15:49,489 [wrapper] apfmon messages muted
[2025-10-12 09:15:49] 2025-10-12 13:15:49,492 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:15:49] 2025-10-12 13:15:49,496 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:15:49]  *** Error codes and diagnostics ***
[2025-10-12 09:15:49]     "exeErrorCode": 0,
[2025-10-12 09:15:49]     "exeErrorDiag": "",
[2025-10-12 09:15:49]     "pilotErrorCode": 0,
[2025-10-12 09:15:49]     "pilotErrorDiag": "",
[2025-10-12 09:15:49]  *** Listing of results directory ***
[2025-10-12 09:15:49] total 407192
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:06 queuedata.json
[2025-10-12 09:15:49] -rwx------ 1 boincer umatlas     36292 Oct 12 03:06 runpilot2-wrapper.sh
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:15:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:00 run_atlas
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:00 job.xml
[2025-10-12 09:15:49] -rw-r--r-- 2 boincer umatlas 218114951 Oct 12 08:00 EVNT.46676267._003493.pool.root.1
[2025-10-12 09:15:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:00 start_atlas.sh
[2025-10-12 09:15:49] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:00 shared
[2025-10-12 09:15:49] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 08:00 input.tar.gz
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:00 boinc_lockfile
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 08:00 pandaJob.out
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas    975520 Oct 12 08:00 agis_schedconf.cvmfs.json
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas   1560580 Oct 12 08:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:15:49] drwx------ 5 boincer umatlas      4096 Oct 12 08:00 pilot3
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 09:09 init_data.xml
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas 192877091 Oct 12 09:14 HITS.46676269._073335.pool.root.1
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas       529 Oct 12 09:14 boinc_task_state.xml
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas      1049 Oct 12 09:14 memory_monitor_summary.json
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas    383693 Oct 12 09:15 log.46676269._073335.job.log.tgz.1
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas      7850 Oct 12 09:15 heartbeat.json
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas        27 Oct 12 09:15 wrapper_checkpoint.txt
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 09:15 boinc_mmap_file
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas        95 Oct 12 09:15 pilot_heartbeat.json
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas      4818 Oct 12 09:15 pilotlog.txt
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas    649884 Oct 12 09:15 log.46676269._073335.job.log.1
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas       357 Oct 12 09:15 output.list
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas       620 Oct 12 09:15 runtime_log
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas   1054720 Oct 12 09:15 result.tar.gz
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 09:15 runtime_log.err
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas       658 Oct 12 09:15 4qpKDm1K5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqyiNDm4GnZRo.diag
[2025-10-12 09:15:49] -rw-r--r-- 1 boincer umatlas     21965 Oct 12 09:15 stderr.txt
[2025-10-12 09:15:49] HITS file was successfully produced:
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas 192877091 Oct 12 09:14 shared/HITS.pool.root.1
[2025-10-12 09:15:49]  *** Contents of shared directory: ***
[2025-10-12 09:15:49] total 402976
[2025-10-12 09:15:49] -rw-r--r-- 2 boincer umatlas 218114951 Oct 12 08:00 ATLAS.root_0
[2025-10-12 09:15:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:00 start_atlas.sh
[2025-10-12 09:15:49] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 08:00 input.tar.gz
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas 192877091 Oct 12 09:14 HITS.pool.root.1
[2025-10-12 09:15:49] -rw------- 1 boincer umatlas   1054720 Oct 12 09:15 result.tar.gz
09:15:50 (27172): run_atlas exited; CPU time 45997.566717
09:15:50 (27172): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN