Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 06:34:51 (4620): vboxwrapper version 26210
2025-10-13 06:34:51 (4620): BOINC client version: 8.0.2
2025-10-13 06:34:51 (4620): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-13 06:34:52 (4620): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 06:34:52 (4620): Create VM. (boinc_63e8781a0accd95a, slot#0)
2025-10-13 06:34:53 (4620): Setting Memory Size for VM. (6000MB)
2025-10-13 06:34:53 (4620): Setting CPU Count for VM. (3)
2025-10-13 06:34:53 (4620): Setting Chipset Options for VM.
2025-10-13 06:34:53 (4620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 06:34:54 (4620): Setting Boot Options for VM.
2025-10-13 06:34:54 (4620): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 06:34:54 (4620): Enabling VM Network Access.
2025-10-13 06:34:55 (4620): Disabling USB Support for VM.
2025-10-13 06:34:55 (4620): Disabling COM Port Support for VM.
2025-10-13 06:34:55 (4620): Disabling LPT Port Support for VM.
2025-10-13 06:34:55 (4620): Disabling Audio Support for VM.
2025-10-13 06:34:56 (4620): Disabling Clipboard Support for VM.
2025-10-13 06:34:56 (4620): Disabling Drag and Drop Support for VM.
2025-10-13 06:34:56 (4620): Adding storage controller(s) to VM.
2025-10-13 06:34:56 (4620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 06:34:57 (4620): Adding VirtualBox Guest Additions to VM.
2025-10-13 06:34:57 (4620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 06:34:57 (4620): forwarding host port 62139 to guest port 80
2025-10-13 06:34:58 (4620): Enabling remote desktop for VM.
2025-10-13 06:34:58 (4620): Enabling shared directory for VM.
2025-10-13 06:34:59 (4620): Starting VM using VBoxManage interface. (boinc_63e8781a0accd95a, slot#0)
2025-10-13 06:35:04 (4620): Successfully started VM. (PID = '16840')
2025-10-13 06:35:04 (4620): Reporting VM Process ID to BOINC.
2025-10-13 06:35:04 (4620): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-13 06:35:04 (4620): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 06:35:04 (4620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 06:35:04 (4620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 06:35:04 (4620): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 06:35:04 (4620): Detected: Web Application Enabled (http://localhost:62139)
2025-10-13 06:35:04 (4620): Detected: Remote Desktop Enabled (localhost:62140)
2025-10-13 06:35:04 (4620): Preference change detected
2025-10-13 06:35:04 (4620): Setting CPU throttle for VM. (100%)
2025-10-13 06:35:04 (4620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 06:35:06 (4620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 06:35:06 (4620): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 06:35:09 (4620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 06:35:09 (4620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 06:35:09 (4620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 06:35:14 (4620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 06:35:14 (4620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 06:35:21 (4620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000192 main     Log opened 2025-10-13T06:35:19.681983000Z
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000329 main     OS Product: Linux
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000374 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000415 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000451 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000452 main     Process ID: 1347
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.000453 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 06:35:21 (4620): Guest Log: 00:00:00.001306 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 06:35:21 (4620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 06:35:21 (4620): Guest Log: [INFO] Mounting shared directory
2025-10-13 06:35:21 (4620): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 06:35:24 (4620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 06:35:24 (4620): Guest Log: [INFO] Detected branch: prod
2025-10-13 06:35:24 (4620): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 06:35:24 (4620): Guest Log: Copying input files
2025-10-13 06:35:25 (4620): Guest Log: Copied input files into RunAtlas.
2025-10-13 06:35:25 (4620): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-13 06:35:31 (4620): Guest Log: 00:00:10.003517 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 800 995 000ns (GuestNow=1 760 330 130 883 631 000 ns GuestLast=1 760 337 319 684 626 000 ns fSetTimeLastLoop=true )
2025-10-13 06:35:33 (4620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 06:35:33 (4620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 06:35:33 (4620): Guest Log: 2.6.3.0 1622 0 29608 151649 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-13 06:35:33 (4620): Guest Log: copied the webapp to /var/www
2025-10-13 06:35:34 (4620): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-13 06:35:34 (4620): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-13 06:35:34 (4620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 06:35:34 (4620): Guest Log:  *** Starting ATLAS job. (PandaID=6839386495 taskID=46676269) ***
2025-10-13 08:15:07 (4620): Status Report: Elapsed Time: '6000.000000'
2025-10-13 08:15:07 (4620): Status Report: CPU Time: '16633.750000'
2025-10-13 09:55:10 (4620): Status Report: Elapsed Time: '12000.000000'
2025-10-13 09:55:10 (4620): Status Report: CPU Time: '34538.390625'
2025-10-13 11:35:12 (4620): Status Report: Elapsed Time: '18000.000000'
2025-10-13 11:35:12 (4620): Status Report: CPU Time: '52444.765625'
2025-10-13 12:22:53 (4620): Guest Log:  *** Job finished ***
2025-10-13 12:22:53 (4620): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:27,890 | INFO     | [data] copytool_out thread has finished
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:28,538 | INFO     | [data] queue_monitor thread has finished
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:37,749 | INFO     | [monitor] cgroup control has ended
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:38,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735976179520)>', '<ExcThread(monitor, started 139735368439552)>']
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:38,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:38,606 | INFO     | [monitor] control thread has ended
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,121 | INFO     | all workflow threads have been joined
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,121 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,121 | INFO     | traces error code: 0
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,249 [wrapper] ==== pilot stdout END ====
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,254 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,259 [wrapper] pilotpid: 5989
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,264 [wrapper] Pilot exit status: 0
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,365 [wrapper] pandaids: 6839386495
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,399 [wrapper] cleanup supervisor_pilot 24187 5990
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,404 [wrapper] Test setup, not cleaning
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,409 [wrapper] apfmon messages muted
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,414 [wrapper] ==== wrapper stdout END ====
2025-10-13 12:22:53 (4620): Guest Log: 2025-10-13 10:22:43,419 [wrapper] ==== wrapper stderr END ====
2025-10-13 12:22:53 (4620): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 12:22:53 (4620): Guest Log:     "exeErrorCode": 0,
2025-10-13 12:22:53 (4620): Guest Log:     "exeErrorDiag": "",
2025-10-13 12:22:53 (4620): Guest Log:     "pilotErrorCode": 0,
2025-10-13 12:22:53 (4620): Guest Log:     "pilotErrorDiag": "",
2025-10-13 12:22:53 (4620): Guest Log:  *** Listing of results directory ***
2025-10-13 12:22:53 (4620): Guest Log: total 206448
2025-10-13 12:22:53 (4620): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 04:04 pilot3.tar.gz
2025-10-13 12:22:53 (4620): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 04:10 runpilot2-wrapper.sh
2025-10-13 12:22:53 (4620): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 04:10 queuedata.json
2025-10-13 12:22:53 (4620): Guest Log: -rwxr-xr-x. 1 atlas atlas      9019 Oct 13 04:35 init_data.xml
2025-10-13 12:22:53 (4620): Guest Log: -rwxr-xr-x. 1 atlas atlas    569677 Oct 13 04:35 input.tar.gz
2025-10-13 12:22:53 (4620): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 04:35 start_atlas.sh
2025-10-13 12:22:53 (4620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 04:35 EVNT.46676267._003256.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 12:22:53 (4620): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 04:35 pandaJob.out
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas    974365 Oct 13 04:36 agis_schedconf.cvmfs.json
2025-10-13 12:22:53 (4620): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 04:36 pilot3
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas 200976262 Oct 13 10:21 HITS.46676269._070791.pool.root.1
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 10:21 pilot_heartbeat.json
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas      1029 Oct 13 10:22 memory_monitor_summary.json
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 10:22 agis_ddmendpoints.agis.ALL.json
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas    474210 Oct 13 10:22 log.46676269._070791.job.log.tgz.1
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas      7786 Oct 13 10:22 heartbeat.json
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 13 10:22 pilotlog.txt
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas   2823539 Oct 13 10:22 log.46676269._070791.job.log.1
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 10:22 output.list
2025-10-13 12:22:53 (4620): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 10:22 runtime_log
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas   3317760 Oct 13 10:22 result.tar.gz
2025-10-13 12:22:53 (4620): Guest Log: -rw-r--r--. 1 atlas atlas      8633 Oct 13 10:22 runtime_log.err
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas       659 Oct 13 10:22 gTVKDmEb2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUATMDm6w8ZOo.diag
2025-10-13 12:22:53 (4620): Guest Log: Looking for outputfile HITS.46676269._070791.pool.root.1
2025-10-13 12:22:53 (4620): Guest Log: HITS file was successfully produced
2025-10-13 12:22:53 (4620): Guest Log: -rw-------. 1 atlas atlas 200976262 Oct 13 10:21 /home/atlas/RunAtlas/HITS.46676269._070791.pool.root.1
2025-10-13 12:22:54 (4620): Guest Log: Successfully finished the ATLAS job!
2025-10-13 12:22:54 (4620): Guest Log: Copying the results back to the shared directory!
2025-10-13 12:22:54 (4620): Guest Log:  *** Contents of shared directory: ***
2025-10-13 12:22:54 (4620): Guest Log: total 414780
2025-10-13 12:22:54 (4620): Guest Log: -rwxrwxrwx. 1 root root 219834116 Oct 13 04:34 ATLAS.root_0
2025-10-13 12:22:54 (4620): Guest Log: -rwxrwxrwx. 1 root root 200976262 Oct 13  2025 HITS.pool.root.1
2025-10-13 12:22:54 (4620): Guest Log: -rwxrwxrwx. 1 root root      9019 Oct 13 04:34 init_data.xml
2025-10-13 12:22:54 (4620): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 12 11:56 input.tar.gz
2025-10-13 12:22:54 (4620): Guest Log: -rwxrwxrwx. 1 root root   3317760 Oct 13  2025 result.tar.gz
2025-10-13 12:22:54 (4620): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 11:56 start_atlas.sh
2025-10-13 12:22:54 (4620): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 12:22:54 (4620): VM Completion File Detected.
2025-10-13 12:22:54 (4620): Powering off VM.
2025-10-13 12:22:54 (4620): Successfully stopped VM.
2025-10-13 12:22:54 (4620): Deregistering VM. (boinc_63e8781a0accd95a, slot#0)
2025-10-13 12:22:54 (4620): Removing network bandwidth throttle group from VM.
2025-10-13 12:22:55 (4620): Removing VM from VirtualBox.
2025-10-13 12:23:00 (4620): called boinc_finish(0)

</stderr_txt>
]]>

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