Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:03:48 (15795): wrapper (7.7.26015): starting
14:03:48 (15795): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:03:48] Arguments: --nthreads 8
[2025-10-12 14:03:48] Threads: 8
[2025-10-12 14:03:48] Checking for CVMFS
[2025-10-12 14:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:03:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:03:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:03:53] 2.11.2.0 12000 157706 139952 151619 1 11 22406641 25165825 4632 130560 0 90041059 99.922 29575115 3687 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 14:03:53] CVMFS is ok
[2025-10-12 14:03:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:03:53] Checking for apptainer binary...
[2025-10-12 14:03:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:03:53] Running /usr/bin/apptainer --version
[2025-10-12 14:03:53] apptainer version 1.3.2-1.el7
[2025-10-12 14:03:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:04:02] cg-vwn246.simple-grid.lan
[2025-10-12 14:04:02] apptainer works
[2025-10-12 14:04:02] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:04:02] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:04:02] Starting ATLAS job with PandaID=6839385222
[2025-10-12 14:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:14:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:14:03] 2025-10-12 16:13:20,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:14:03] 2025-10-12 16:13:20,305 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:14:03] 2025-10-12 16:13:20,306 | INFO     | sum of square deviations: 3922276332.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,308 | INFO     | sum of deviations: 17935035901.999992
[2025-10-12 18:14:03] 2025-10-12 16:13:20,308 | INFO     | mean x: 1760278406.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,308 | INFO     | mean y: 2493410.0772532187
[2025-10-12 18:14:03] 2025-10-12 16:13:20,309 | INFO     | -- intersect: -8046571402.504982
[2025-10-12 18:14:03] 2025-10-12 16:13:20,309 | INFO     | intersect: -8046571402.504982
[2025-10-12 18:14:03] 2025-10-12 16:13:20,309 | INFO     | chi2: 5.656029382806576
[2025-10-12 18:14:03] 2025-10-12 16:13:20,310 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,311 | INFO     | sum of deviations: 33274227204.50001
[2025-10-12 18:14:03] 2025-10-12 16:13:20,312 | INFO     | mean x: 1760278253.5
[2025-10-12 18:14:03] 2025-10-12 16:13:20,315 | INFO     | mean y: 2502710.302631579
[2025-10-12 18:14:03] 2025-10-12 16:13:20,315 | INFO     | -- intersect: -15934795205.327282
[2025-10-12 18:14:03] 2025-10-12 16:13:20,315 | INFO     | intersect: -15934795205.327282
[2025-10-12 18:14:03] 2025-10-12 16:13:20,316 | INFO     | chi2: 4.9359246921545035
[2025-10-12 18:14:03] 2025-10-12 16:13:20,316 | INFO     | current chi2=4.9359246921545035 (change=12.731629238721345 %)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,316 | INFO     | right removable region: 227
[2025-10-12 18:14:03] 2025-10-12 16:13:20,316 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,318 | INFO     | sum of deviations: -57738043361.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,319 | INFO     | mean x: 1760278558.5
[2025-10-12 18:14:03] 2025-10-12 16:13:20,319 | INFO     | mean y: 2540024.6140350876
[2025-10-12 18:14:03] 2025-10-12 16:13:20,319 | INFO     | -- intersect: 27657233607.539024
[2025-10-12 18:14:03] 2025-10-12 16:13:20,319 | INFO     | intersect: 27657233607.539024
[2025-10-12 18:14:03] 2025-10-12 16:13:20,319 | INFO     | chi2: 1.5647060665008756
[2025-10-12 18:14:03] 2025-10-12 16:13:20,319 | INFO     | current chi2=1.5647060665008756 (change=72.33560930115867 %)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,323 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,325 | INFO     | sum of deviations: -79587593222.99998
[2025-10-12 18:14:03] 2025-10-12 16:13:20,325 | INFO     | mean x: 1760278711.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,325 | INFO     | mean y: 2553987.130044843
[2025-10-12 18:14:03] 2025-10-12 16:13:20,325 | INFO     | -- intersect: 40744571241.77806
[2025-10-12 18:14:03] 2025-10-12 16:13:20,326 | INFO     | intersect: 40744571241.77806
[2025-10-12 18:14:03] 2025-10-12 16:13:20,329 | INFO     | chi2: 0.9975737951002935
[2025-10-12 18:14:03] 2025-10-12 16:13:20,329 | INFO     | current chi2=0.9975737951002935 (change=36.24529127498367 %)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,330 | INFO     | sum of square deviations: 3212467674.5
[2025-10-12 18:14:03] 2025-10-12 16:13:20,332 | INFO     | sum of deviations: -74067001082.49997
[2025-10-12 18:14:03] 2025-10-12 16:13:20,332 | INFO     | mean x: 1760278863.5
[2025-10-12 18:14:03] 2025-10-12 16:13:20,332 | INFO     | mean y: 2550259.0137614678
[2025-10-12 18:14:03] 2025-10-12 16:13:20,332 | INFO     | -- intersect: 40587729535.144196
[2025-10-12 18:14:03] 2025-10-12 16:13:20,332 | INFO     | intersect: 40587729535.144196
[2025-10-12 18:14:03] 2025-10-12 16:13:20,333 | INFO     | chi2: 0.9970321886927198
[2025-10-12 18:14:03] 2025-10-12 16:13:20,333 | INFO     | current chi2=0.9970321886927198 (change=0.054292365159739696 %)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,333 | INFO     | left removable region: 30
[2025-10-12 18:14:03] 2025-10-12 16:13:20,333 | INFO     | sum of square deviations: 2370641658.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,335 | INFO     | sum of deviations: -37869599405.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,335 | INFO     | mean x: 1760279138.0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,335 | INFO     | mean y: 2546352.375634518
[2025-10-12 18:14:03] 2025-10-12 16:13:20,335 | INFO     | -- intersect: 28121965232.9489
[2025-10-12 18:14:03] 2025-10-12 16:13:20,335 | INFO     | intersect: 28121965232.9489
[2025-10-12 18:14:03] 2025-10-12 16:13:20,336 | INFO     | chi2: 0.18738266309701823
[2025-10-12 18:14:03] 2025-10-12 16:13:20,336 | INFO     | -- intersect: 28121965232.9489
[2025-10-12 18:14:03] 2025-10-12 16:13:20,336 | INFO     | current memory leak: -15.97 B/s (using 197 data points, chi2=0.19)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,336 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | ..............................
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | . Timing measurements:
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | . get job = 0 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | . initial setup = 9 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | . payload setup = 119 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | . stage-in = 0 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,338 | INFO     | . payload execution = 14334 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,339 | INFO     | . stage-out = 3 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,339 | INFO     | . log creation = 1 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,339 | INFO     | ..............................
[2025-10-12 18:14:03] 2025-10-12 16:13:20,376 | INFO     | time since job start (14753s) is within the limit (172800.0s)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,685 | INFO     | 
[2025-10-12 18:14:03] 2025-10-12 16:13:20,685 | INFO     | job summary report
[2025-10-12 18:14:03] 2025-10-12 16:13:20,685 | INFO     | --------------------------------------------------
[2025-10-12 18:14:03] 2025-10-12 16:13:20,685 | INFO     | PanDA job id: 6839385222
[2025-10-12 18:14:03] 2025-10-12 16:13:20,685 | INFO     | task id: 46676269
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | errors: (none)
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | pilot state: finished 
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | transexitcode: 0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | exeerrorcode: 0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | exeerrordiag: 
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | exitcode: 0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | exitmsg: OK
[2025-10-12 18:14:03] 2025-10-12 16:13:20,686 | INFO     | cpuconsumptiontime: 53352 s
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | nevents: 400
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | neventsw: 0
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | pid: 26433
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | pgrp: 26433
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | corecount: 8
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | event service: False
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 66: 2349181, 77: 2349209, 87: 2349265, 91: 2349555, 98: 2349863, 1
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | --------------------------------------------------
[2025-10-12 18:14:03] 2025-10-12 16:13:20,687 | INFO     | 
[2025-10-12 18:14:03] 2025-10-12 16:13:20,688 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-12 18:14:03] 2025-10-12 16:13:21,244 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:14:03] 2025-10-12 16:13:21,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:14:03] 2025-10-12 16:13:21,247 | INFO     | job 6839385222 has completed (purged errors)
[2025-10-12 18:14:03] 2025-10-12 16:13:21,247 | INFO     | overall cleanup function is called
[2025-10-12 18:14:03] 2025-10-12 16:13:22,256 | INFO     | --- collectZombieJob: --- 10, [26433]
[2025-10-12 18:14:03] 2025-10-12 16:13:22,256 | INFO     | zombie collector waiting for pid 26433
[2025-10-12 18:14:03] 2025-10-12 16:13:22,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:14:03] 2025-10-12 16:13:22,256 | INFO     | collected zombie processes
[2025-10-12 18:14:03] 2025-10-12 16:13:22,256 | INFO     | will attempt to kill all subprocesses of pid=26433
[2025-10-12 18:14:03] 2025-10-12 16:13:22,378 | INFO     | process IDs to be killed: [26433] (in reverse order)
[2025-10-12 18:14:03] 2025-10-12 16:13:23,249 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:14:03] 2025-10-12 16:13:23,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:14:03] 2025-10-12 16:13:23,253 | INFO     | did not find any defunct processes belonging to 26433
[2025-10-12 18:14:03] 2025-10-12 16:13:23,256 | INFO     | did not find any defunct processes belonging to 26433
[2025-10-12 18:14:03] 2025-10-12 16:13:23,257 | INFO     | ready for new job
[2025-10-12 18:14:03] 2025-10-12 16:13:23,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:14:03] 2025-10-12 16:13:23,259 | INFO     | ***************************************
[2025-10-12 18:14:03] 2025-10-12 16:13:23,259 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:14:03] 2025-10-12 16:13:23,259 | INFO     | ***************************************
[2025-10-12 18:14:03] 2025-10-12 16:13:23,259 | INFO     | 
[2025-10-12 18:14:03] 2025-10-12 16:13:23,260 | INFO     | pilot is running in a VM
[2025-10-12 18:14:03] 2025-10-12 16:13:23,260 | INFO     | architecture information:
[2025-10-12 18:14:03] 2025-10-12 16:13:23,261 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:14:03] 2025-10-12 16:13:23,409 | INFO     | cat /etc/os-release:
[2025-10-12 18:14:03] NAME="CentOS Linux"
[2025-10-12 18:14:03] VERSION="7 (Core)"
[2025-10-12 18:14:03] ID="centos"
[2025-10-12 18:14:03] ID_LIKE="rhel fedora"
[2025-10-12 18:14:03] VERSION_ID="7"
[2025-10-12 18:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:14:03] ANSI_COLOR="0;31"
[2025-10-12 18:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:14:03] HOME_URL="https://www.centos.org/"
[2025-10-12 18:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:14:03] 
[2025-10-12 18:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:14:03] 
[2025-10-12 18:14:03] 2025-10-12 16:13:23,409 | INFO     | ***************************************
[2025-10-12 18:14:03] 2025-10-12 16:13:23,913 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-12 18:14:03] 2025-10-12 16:13:24,155 | INFO     | sufficient remaining disk space (495903047680 B)
[2025-10-12 18:14:03] 2025-10-12 16:13:24,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:14:03] 2025-10-12 16:13:24,155 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:14:03] 2025-10-12 16:13:24,155 | INFO     | update_server=False
[2025-10-12 18:14:03] 2025-10-12 16:13:24,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:14:03] 2025-10-12 16:13:24,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:14:03] 2025-10-12 16:13:24,156 | INFO     | aborting loop
[2025-10-12 18:14:03] 2025-10-12 16:13:24,591 | INFO     | all payload control threads have been joined
[2025-10-12 18:14:03] 2025-10-12 16:13:24,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:14:03] 2025-10-12 16:13:24,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:14:03] 2025-10-12 16:13:24,703 | INFO     | all data control threads have been joined
[2025-10-12 18:14:03] 2025-10-12 16:13:25,161 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,162 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,286 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,371 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,430 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,435 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:14:03] 2025-10-12 16:13:25,598 | INFO     | [payload] control thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,709 | INFO     | [data] control thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,754 | INFO     | [job] validate thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:25,825 | INFO     | all job control threads have been joined
[2025-10-12 18:14:03] 2025-10-12 16:13:26,048 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:26,095 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:26,509 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:26,600 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:26,831 | INFO     | [job] control thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:28,674 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:14:03] 2025-10-12 16:13:52,394 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:14:03] 2025-10-12 16:13:53,563 | INFO     | PID=19888 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 18:14:03] 2025-10-12 16:13:53,564 | INFO     | .. there are 9 such processes running
[2025-10-12 18:14:03] 2025-10-12 16:13:53,564 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:14:03] 2025-10-12 16:13:53,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:14:03] 2025-10-12 16:13:53,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:14:03] 2025-10-12 16:13:54,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425676560192)>', '<ExcThread(monitor, started 140424995911424)>']
[2025-10-12 18:14:03] 2025-10-12 16:13:54,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:14:03] 2025-10-12 16:13:54,570 | INFO     | [monitor] control thread has ended
[2025-10-12 18:14:03] 2025-10-12 16:13:59,043 | INFO     | all workflow threads have been joined
[2025-10-12 18:14:03] 2025-10-12 16:13:59,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:14:03] 2025-10-12 16:13:59,043 | INFO     | traces error code: 0
[2025-10-12 18:14:03] 2025-10-12 16:13:59,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:14:03] 2025-10-12 16:13:59,479 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:14:03] 2025-10-12 16:13:59,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:14:03] 2025-10-12 16:13:59,656 [wrapper] pilotpid: 19888
[2025-10-12 18:14:03] 2025-10-12 16:13:59,747 [wrapper] Pilot exit status: 0
[2025-10-12 18:14:03] 2025-10-12 16:14:00,209 [wrapper] pandaids: 6839385222
[2025-10-12 18:14:03] 2025-10-12 16:14:00,513 [wrapper] cleanup supervisor_pilot  3479 19889
[2025-10-12 18:14:03] 2025-10-12 16:14:00,589 [wrapper] Test setup, not cleaning
[2025-10-12 18:14:03] 2025-10-12 16:14:00,691 [wrapper] apfmon messages muted
[2025-10-12 18:14:03] 2025-10-12 16:14:00,796 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:14:03] 2025-10-12 16:14:00,907 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:14:03]  *** Error codes and diagnostics ***
[2025-10-12 18:14:03]     "exeErrorCode": 0,
[2025-10-12 18:14:03]     "exeErrorDiag": "",
[2025-10-12 18:14:03]     "pilotErrorCode": 0,
[2025-10-12 18:14:03]     "pilotErrorDiag": "",
[2025-10-12 18:14:03]  *** Listing of results directory ***
[2025-10-12 18:14:03] total 417700
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:04 pilot3.tar.gz
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc      5112 Oct 12 06:06 queuedata.json
[2025-10-12 18:14:03] -rwx------. 1 boinc boinc     36292 Oct 12 06:07 runpilot2-wrapper.sh
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc       100 Oct 12 14:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:14:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 14:03 run_atlas
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc       105 Oct 12 14:03 job.xml
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc      6389 Oct 12 14:03 init_data.xml
[2025-10-12 18:14:03] -rw-r--r--. 2 boinc boinc 224495475 Oct 12 14:03 EVNT.46676267._003231.pool.root.1
[2025-10-12 18:14:03] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:03 start_atlas.sh
[2025-10-12 18:14:03] drwxrwx--x. 2 boinc boinc        68 Oct 12 14:03 shared
[2025-10-12 18:14:03] -rw-r--r--. 2 boinc boinc    569680 Oct 12 14:03 input.tar.gz
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc         0 Oct 12 14:03 boinc_lockfile
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc      2550 Oct 12 14:04 pandaJob.out
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc    975520 Oct 12 14:07 agis_schedconf.cvmfs.json
[2025-10-12 18:14:03] drwx------. 5 boinc boinc      4096 Oct 12 14:07 pilot3
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc 194462664 Oct 12 18:10 HITS.46676269._070466.pool.root.1
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc       531 Oct 12 18:10 boinc_task_state.xml
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc      1020 Oct 12 18:11 memory_monitor_summary.json
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc   1560580 Oct 12 18:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc    464146 Oct 12 18:11 log.46676269._070466.job.log.tgz.1
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc        95 Oct 12 18:13 pilot_heartbeat.json
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc      7789 Oct 12 18:13 heartbeat.json
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc        28 Oct 12 18:13 wrapper_checkpoint.txt
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:13 boinc_mmap_file
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc      4884 Oct 12 18:13 pilotlog.txt
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc   1971610 Oct 12 18:14 log.46676269._070466.job.log.1
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc       357 Oct 12 18:14 output.list
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:14 runtime_log
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc   2457600 Oct 12 18:14 result.tar.gz
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc      8703 Oct 12 18:14 runtime_log.err
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc       657 Oct 12 18:14 CS8NDmHY2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpXiNDmFCZwNn.diag
[2025-10-12 18:14:03] -rw-r--r--. 1 boinc boinc     20633 Oct 12 18:14 stderr.txt
[2025-10-12 18:14:03] HITS file was successfully produced:
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc 194462664 Oct 12 18:10 shared/HITS.pool.root.1
[2025-10-12 18:14:03]  *** Contents of shared directory: ***
[2025-10-12 18:14:03] total 412120
[2025-10-12 18:14:03] -rw-r--r--. 2 boinc boinc 224495475 Oct 12 14:03 ATLAS.root_0
[2025-10-12 18:14:03] -rw-r--r--. 2 boinc boinc     15120 Oct 12 14:03 start_atlas.sh
[2025-10-12 18:14:03] -rw-r--r--. 2 boinc boinc    569680 Oct 12 14:03 input.tar.gz
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc 194462664 Oct 12 18:10 HITS.pool.root.1
[2025-10-12 18:14:03] -rw-------. 1 boinc boinc   2457600 Oct 12 18:14 result.tar.gz
18:14:04 (15795): run_atlas exited; CPU time 53557.523869
18:14:04 (15795): called boinc_finish(0)

</stderr_txt>
]]>

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