Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:54:42 (446265): wrapper (7.7.26015): starting
19:54:42 (446265): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 19:54:42] Arguments: --nthreads 12
[2025-10-12 19:54:42] Threads: 12
[2025-10-12 19:54:42] Checking for CVMFS
[2025-10-12 19:54:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:54:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:54:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:54:42] 2.13.1.0 4007501 1400 73072 151630 1 57 3299258 4097025 0 130560 0 1649094 99.994 50784 4245 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 19:54:42] CVMFS is ok
[2025-10-12 19:54:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:54:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:54:42] Further information can be found at the LHC@home message board.
[2025-10-12 19:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:54:42] Checking for apptainer binary...
[2025-10-12 19:54:42] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 19:54:42] apptainer is not installed, using version from CVMFS
[2025-10-12 19:54:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:54:42] pckelar6.cern.ch
[2025-10-12 19:54:42] apptainer works
[2025-10-12 19:54:42] Set ATHENA_PROC_NUMBER=12
[2025-10-12 19:54:42] Set ATHENA_CORE_NUMBER=12
[2025-10-12 19:54:42] Starting ATLAS job with PandaID=6839318410
[2025-10-12 19:54:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:02:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:02:03]  is_tar=False
[2025-10-12 21:02:03]  lfn=log.46676269._069831.job.log.tgz.1
[2025-10-12 21:02:03]  mtime=0
[2025-10-12 21:02:03]  protocol_id=None
[2025-10-12 21:02:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 21:02:03]  replicas=None
[2025-10-12 21:02:03]  scope=mc23_13p6TeV
[2025-10-12 21:02:03]  status=None
[2025-10-12 21:02:03]  status_code=0
[2025-10-12 21:02:03]  storage_token=
[2025-10-12 21:02:03]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6839318410/log.46676269._069831.job.log.tgz.1
[2025-10-12 21:02:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/92/log.46676269._069831.job.log.tgz.1
[2025-10-12 21:02:03]  workdir=None
[2025-10-12 21:02:03] ]
[2025-10-12 21:02:03] 2025-10-12 19:01:13,702 | INFO     | transferring file log.46676269._069831.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6839318410/log.46676269._069831.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 21:02:03] 2025-10-12 19:01:13,702 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6839318410/log.46676269._069831.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._069831.job
[2025-10-12 21:02:03] 2025-10-12 19:01:13,718 | INFO     | adding to output.list: log.46676269._069831.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/92/log.46676269._069831.job.log.tg
[2025-10-12 21:02:03] 2025-10-12 19:01:13,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:02:03] 2025-10-12 19:01:13,719 | INFO     | summary of transferred files:
[2025-10-12 21:02:03] 2025-10-12 19:01:13,719 | INFO     |  -- lfn=log.46676269._069831.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:02:03] 2025-10-12 19:01:13,719 | INFO     | stage-out finished correctly
[2025-10-12 21:02:03] 2025-10-12 19:01:13,785 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:02:03] 2025-10-12 19:01:14,791 | INFO     | job 6839318410 has state=finished
[2025-10-12 21:02:03] 2025-10-12 19:01:14,791 | INFO     | preparing for final server update for job 6839318410 in state='finished'
[2025-10-12 21:02:03] 2025-10-12 19:01:14,791 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:02:03] 2025-10-12 19:01:14,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:02:03] 2025-10-12 19:01:14,792 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:02:03] 2025-10-12 19:01:14,792 | INFO     | job 6839318410 has finished - writing final server update
[2025-10-12 21:02:03] 2025-10-12 19:01:14,792 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:02:03] 2025-10-12 19:01:14,793 | INFO     | executing command: lscpu
[2025-10-12 21:02:03] 2025-10-12 19:01:14,810 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:02:03] 2025-10-12 19:01:15,621 | INFO     | time since job start (3985s) is within the limit (172800.0s)
[2025-10-12 21:02:03] 2025-10-12 19:01:15,845 | WARNING  | process 458026 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 21:02:03] 2025-10-12 19:01:15,845 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839318410/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:02:03] 2025-10-12 19:01:15,930 | INFO     | number of running child processes to parent process 458026: 1
[2025-10-12 21:02:03] 2025-10-12 19:01:15,930 | INFO     | maximum number of monitored processes: 6
[2025-10-12 21:02:03] 2025-10-12 19:01:17,626 | INFO     | time since job start (3987s) is within the limit (172800.0s)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,071 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:02:03] 2025-10-12 19:01:18,072 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2386.7253333333333
[2025-10-12 21:02:03] 2025-10-12 19:01:18,074 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839318410/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,074 | INFO     | extracted standard info from prmon json
[2025-10-12 21:02:03] 2025-10-12 19:01:18,074 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:02:03] 2025-10-12 19:01:18,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:02:03] 2025-10-12 19:01:18,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:02:03] 2025-10-12 19:01:18,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:02:03] 2025-10-12 19:01:18,076 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:02:03] 2025-10-12 19:01:18,076 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | sum of deviations: -2449772810.0
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | mean x: 1760293757.5
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | mean y: 2776807.724137931
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | -- intersect: 71300830424.03828
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | intersect: 71300830424.03828
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | chi2: 0.06123824693300751
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | -- intersect: 71300830424.03828
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | current memory leak: -40.50 B/s (using 58 data points, chi2=0.06)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,077 | INFO     | could have reported an average CPU frequency of 2557 MHz (6 samples)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | ..............................
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . Timing measurements:
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . get job = 0 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . initial setup = 1 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . payload setup = 5 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . stage-in = 0 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . payload execution = 3958 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . stage-out = 0 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | . log creation = 0 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,078 | INFO     | ..............................
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | 
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | job summary report
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | --------------------------------------------------
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | PanDA job id: 6839318410
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | task id: 46676269
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | errors: (none)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | pilot state: finished 
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | transexitcode: 0
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | exeerrorcode: 0
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | exeerrordiag: 
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | exitcode: 0
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | exitmsg: OK
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | cpuconsumptiontime: 43538 s
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | nevents: 400
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | neventsw: 0
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | pid: 458026
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | pgrp: 458026
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | corecount: 12
[2025-10-12 21:02:03] 2025-10-12 19:01:18,146 | INFO     | event service: False
[2025-10-12 21:02:03] 2025-10-12 19:01:18,147 | INFO     | sizes: {0: 2348858, 4: 2349120, 11: 2349148, 3968: 2375039, 3969: 2384092, 3970: 2384092, 3974: 2384414}
[2025-10-12 21:02:03] 2025-10-12 19:01:18,147 | INFO     | --------------------------------------------------
[2025-10-12 21:02:03] 2025-10-12 19:01:18,147 | INFO     | 
[2025-10-12 21:02:03] 2025-10-12 19:01:18,147 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:02:03] 2025-10-12 19:01:18,169 | INFO     | job 6839318410 has completed (purged errors)
[2025-10-12 21:02:03] 2025-10-12 19:01:18,169 | INFO     | overall cleanup function is called
[2025-10-12 21:02:03] 2025-10-12 19:01:19,176 | INFO     | --- collectZombieJob: --- 10, [458026]
[2025-10-12 21:02:03] 2025-10-12 19:01:19,176 | INFO     | zombie collector waiting for pid 458026
[2025-10-12 21:02:03] 2025-10-12 19:01:19,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:02:03] 2025-10-12 19:01:19,176 | INFO     | collected zombie processes
[2025-10-12 21:02:03] 2025-10-12 19:01:19,176 | INFO     | will attempt to kill all subprocesses of pid=458026
[2025-10-12 21:02:03] 2025-10-12 19:01:19,257 | INFO     | process IDs to be killed: [458026] (in reverse order)
[2025-10-12 21:02:03] 2025-10-12 19:01:19,298 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:02:03] 2025-10-12 19:01:19,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:02:03] 2025-10-12 19:01:19,300 | INFO     | did not find any defunct processes belonging to 458026
[2025-10-12 21:02:03] 2025-10-12 19:01:19,302 | INFO     | did not find any defunct processes belonging to 458026
[2025-10-12 21:02:03] 2025-10-12 19:01:19,303 | INFO     | ready for new job
[2025-10-12 21:02:03] 2025-10-12 19:01:19,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:02:03] 2025-10-12 19:01:19,304 | INFO     | ***************************************
[2025-10-12 21:02:03] 2025-10-12 19:01:19,304 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:02:03] 2025-10-12 19:01:19,304 | INFO     | ***************************************
[2025-10-12 21:02:03] 2025-10-12 19:01:19,304 | INFO     | 
[2025-10-12 21:02:03] 2025-10-12 19:01:19,305 | INFO     | architecture information:
[2025-10-12 21:02:03] 2025-10-12 19:01:19,305 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:02:03] 2025-10-12 19:01:19,314 | INFO     | cat /etc/os-release:
[2025-10-12 21:02:03] NAME="CentOS Linux"
[2025-10-12 21:02:03] VERSION="7 (Core)"
[2025-10-12 21:02:03] ID="centos"
[2025-10-12 21:02:03] ID_LIKE="rhel fedora"
[2025-10-12 21:02:03] VERSION_ID="7"
[2025-10-12 21:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:02:03] ANSI_COLOR="0;31"
[2025-10-12 21:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:02:03] HOME_URL="https://www.centos.org/"
[2025-10-12 21:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:02:03] 
[2025-10-12 21:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:02:03] 
[2025-10-12 21:02:03] 2025-10-12 19:01:19,315 | INFO     | ***************************************
[2025-10-12 21:02:03] 2025-10-12 19:01:19,818 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 21:02:03] 2025-10-12 19:01:19,831 | INFO     | sufficient remaining disk space (870495289344 B)
[2025-10-12 21:02:03] 2025-10-12 19:01:19,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:02:03] 2025-10-12 19:01:19,832 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:02:03] 2025-10-12 19:01:19,832 | INFO     | update_server=False
[2025-10-12 21:02:03] 2025-10-12 19:01:19,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:02:03] 2025-10-12 19:01:19,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:02:03] 2025-10-12 19:01:19,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:02:03] 2025-10-12 19:01:19,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:02:03] 2025-10-12 19:01:19,833 | INFO     | aborting loop
[2025-10-12 21:02:03] 2025-10-12 19:01:19,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:02:03] 2025-10-12 19:01:19,887 | INFO     | all job control threads have been joined
[2025-10-12 21:02:03] 2025-10-12 19:01:20,153 | INFO     | all payload control threads have been joined
[2025-10-12 21:02:03] 2025-10-12 19:01:20,777 | INFO     | all data control threads have been joined
[2025-10-12 21:02:03] 2025-10-12 19:01:20,837 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:20,838 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:20,838 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:20,893 | INFO     | [job] control thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,053 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,159 | INFO     | [payload] control thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,208 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,528 | INFO     | [job] validate thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,778 | INFO     | [data] control thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,837 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,838 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,866 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:21,928 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:22,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:22,325 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:23,858 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:02:03] 2025-10-12 19:01:50,817 | INFO     | PID=450024 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 21:02:03] 2025-10-12 19:01:50,818 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:02:03] 2025-10-12 19:01:50,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:02:03] 2025-10-12 19:01:50,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:02:03] 2025-10-12 19:01:56,246 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:02:03] 2025-10-12 19:01:58,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278977161024)>', '<ExcThread(monitor, started 140277876496128)>']
[2025-10-12 21:02:03] 2025-10-12 19:01:58,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:02:03] 2025-10-12 19:01:58,859 | INFO     | [monitor] control thread has ended
[2025-10-12 21:02:03] 2025-10-12 19:02:03,065 | INFO     | all workflow threads have been joined
[2025-10-12 21:02:03] 2025-10-12 19:02:03,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:02:03] 2025-10-12 19:02:03,066 | INFO     | traces error code: 0
[2025-10-12 21:02:03] 2025-10-12 19:02:03,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:02:03] 2025-10-12 19:02:03,141 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:02:03] 2025-10-12 19:02:03,144 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:02:03] 2025-10-12 19:02:03,147 [wrapper] pilotpid: 450024
[2025-10-12 21:02:03] 2025-10-12 19:02:03,149 [wrapper] Pilot exit status: 0
[2025-10-12 21:02:03] 2025-10-12 19:02:03,158 [wrapper] pandaids: 6839318410
[2025-10-12 21:02:03] 2025-10-12 19:02:03,180 [wrapper] cleanup supervisor_pilot  472213 450025
[2025-10-12 21:02:03] 2025-10-12 19:02:03,182 [wrapper] Test setup, not cleaning
[2025-10-12 21:02:03] 2025-10-12 19:02:03,184 [wrapper] apfmon messages muted
[2025-10-12 21:02:03] 2025-10-12 19:02:03,187 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:02:03] 2025-10-12 19:02:03,189 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:02:03]  *** Error codes and diagnostics ***
[2025-10-12 21:02:03]     "exeErrorCode": 0,
[2025-10-12 21:02:03]     "exeErrorDiag": "",
[2025-10-12 21:02:03]     "pilotErrorCode": 0,
[2025-10-12 21:02:03]     "pilotErrorDiag": "",
[2025-10-12 21:02:03]  *** Listing of results directory ***
[2025-10-12 21:02:03] total 410012
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc    557409 Oct 12 04:56 pilot3.tar.gz
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc      5112 Oct 12 05:00 queuedata.json
[2025-10-12 21:02:03] -rwx------. 1 boinc boinc     36292 Oct 12 05:00 runpilot2-wrapper.sh
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc       100 Oct 12 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:02:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 19:54 run_atlas
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc       105 Oct 12 19:54 job.xml
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc      6291 Oct 12 19:54 init_data.xml
[2025-10-12 21:02:03] -rw-r--r--. 2 boinc boinc 218514800 Oct 12 19:54 EVNT.46676267._003204.pool.root.1
[2025-10-12 21:02:03] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:54 start_atlas.sh
[2025-10-12 21:02:03] drwxrwx--x. 2 boinc boinc        68 Oct 12 19:54 shared
[2025-10-12 21:02:03] -rw-r--r--. 2 boinc boinc    569679 Oct 12 19:54 input.tar.gz
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc         0 Oct 12 19:54 boinc_lockfile
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc      2551 Oct 12 19:54 pandaJob.out
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc    975528 Oct 12 19:54 agis_schedconf.cvmfs.json
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc   1560580 Oct 12 19:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:02:03] drwx------. 5 boinc boinc      4096 Oct 12 19:54 pilot3
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc 195501291 Oct 12 21:00 HITS.46676269._069831.pool.root.1
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc       530 Oct 12 21:00 boinc_task_state.xml
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc      1013 Oct 12 21:01 memory_monitor_summary.json
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc    390535 Oct 12 21:01 log.46676269._069831.job.log.tgz.1
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc      7786 Oct 12 21:01 heartbeat.json
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc        95 Oct 12 21:01 pilot_heartbeat.json
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc      8192 Oct 12 21:01 boinc_mmap_file
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc        27 Oct 12 21:01 wrapper_checkpoint.txt
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc      4748 Oct 12 21:02 pilotlog.txt
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc    579482 Oct 12 21:02 log.46676269._069831.job.log.1
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc       357 Oct 12 21:02 output.list
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc       620 Oct 12 21:02 runtime_log
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc    993280 Oct 12 21:02 result.tar.gz
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc       657 Oct 12 21:02 ZgAODmSV1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxQiNDmDocWOo.diag
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc      8727 Oct 12 21:02 runtime_log.err
[2025-10-12 21:02:03] -rw-r--r--. 1 boinc boinc     21655 Oct 12 21:02 stderr.txt
[2025-10-12 21:02:03] HITS file was successfully produced:
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc 195501291 Oct 12 21:00 shared/HITS.pool.root.1
[2025-10-12 21:02:03]  *** Contents of shared directory: ***
[2025-10-12 21:02:03] total 405864
[2025-10-12 21:02:03] -rw-r--r--. 2 boinc boinc 218514800 Oct 12 19:54 ATLAS.root_0
[2025-10-12 21:02:03] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:54 start_atlas.sh
[2025-10-12 21:02:03] -rw-r--r--. 2 boinc boinc    569679 Oct 12 19:54 input.tar.gz
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc 195501291 Oct 12 21:00 HITS.pool.root.1
[2025-10-12 21:02:03] -rw-------. 1 boinc boinc    993280 Oct 12 21:02 result.tar.gz
21:02:05 (446265): run_atlas exited; CPU time 43552.677162
21:02:05 (446265): called boinc_finish(0)

</stderr_txt>
]]>

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