Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:50:31 (65086): wrapper (7.7.26015): starting
08:50:31 (65086): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 08:50:31] Arguments: --nthreads 11
[2025-10-12 08:50:31] Threads: 11
[2025-10-12 08:50:31] Checking for CVMFS
[2025-10-12 08:50:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:50:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:50:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:50:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:50:31] 2.13.2.0 4182602 7102 159336 151620 0 385 40210625 40960001 13077 16776704 0 13389761 99.598 15357019 31588 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 08:50:31] CVMFS is ok
[2025-10-12 08:50:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:50:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:50:31] Further information can be found at the LHC@home message board.
[2025-10-12 08:50:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:50:31] Checking for apptainer binary...
[2025-10-12 08:50:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:50:31] Running /usr/bin/apptainer --version
[2025-10-12 08:50:31] apptainer version 1.4.3-1.el9
[2025-10-12 08:50:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:50:31] c6-8-12-4.aglt2.org
[2025-10-12 08:50:31] apptainer works
[2025-10-12 08:50:31] Set ATHENA_PROC_NUMBER=11
[2025-10-12 08:50:31] Set ATHENA_CORE_NUMBER=11
[2025-10-12 08:50:32] Starting ATLAS job with PandaID=6839317537
[2025-10-12 08:50:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:15:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:15:30] 2025-10-12 18:14:40,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:15:30] 2025-10-12 18:14:40,956 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:15:30] 2025-10-12 18:14:40,957 | INFO     | sum of square deviations: 9971134548.279875
[2025-10-12 14:15:30] 2025-10-12 18:14:40,959 | INFO     | sum of deviations: 5938445042.201267
[2025-10-12 14:15:30] 2025-10-12 18:14:40,959 | INFO     | mean x: 1760283142.3993711
[2025-10-12 14:15:30] 2025-10-12 18:14:40,959 | INFO     | mean y: 2238465.006289308
[2025-10-12 14:15:30] 2025-10-12 18:14:40,960 | INFO     | -- intersect: -1046122145.2369376
[2025-10-12 14:15:30] 2025-10-12 18:14:40,960 | INFO     | intersect: -1046122145.2369376
[2025-10-12 14:15:30] 2025-10-12 18:14:40,960 | INFO     | chi2: 4.423258042296875
[2025-10-12 14:15:30] 2025-10-12 18:14:40,961 | INFO     | sum of square deviations: 9508207893.495205
[2025-10-12 14:15:30] 2025-10-12 18:14:40,963 | INFO     | sum of deviations: 77941305660.10222
[2025-10-12 14:15:30] 2025-10-12 18:14:40,963 | INFO     | mean x: 1760282989.9105432
[2025-10-12 14:15:30] 2025-10-12 18:14:40,963 | INFO     | mean y: 2262112.5750798723
[2025-10-12 14:15:30] 2025-10-12 18:14:40,964 | INFO     | -- intersect: -14427245119.671837
[2025-10-12 14:15:30] 2025-10-12 18:14:40,964 | INFO     | intersect: -14427245119.671837
[2025-10-12 14:15:30] 2025-10-12 18:14:40,964 | INFO     | chi2: 1.6173058475225983
[2025-10-12 14:15:30] 2025-10-12 18:14:40,964 | INFO     | current chi2=1.6173058475225983 (change=63.436321551731666 %)
[2025-10-12 14:15:30] 2025-10-12 18:14:40,965 | INFO     | sum of square deviations: 9059744066.269396
[2025-10-12 14:15:30] 2025-10-12 18:14:40,967 | INFO     | sum of deviations: 79125989251.66235
[2025-10-12 14:15:30] 2025-10-12 18:14:40,998 | INFO     | mean x: 1760282837.4058442
[2025-10-12 14:15:30] 2025-10-12 18:14:40,998 | INFO     | mean y: 2262511.298701299
[2025-10-12 14:15:30] 2025-10-12 18:14:40,998 | INFO     | -- intersect: -15371695058.985584
[2025-10-12 14:15:30] 2025-10-12 18:14:40,998 | INFO     | intersect: -15371695058.985584
[2025-10-12 14:15:30] 2025-10-12 18:14:40,999 | INFO     | chi2: 1.6102905397131062
[2025-10-12 14:15:30] 2025-10-12 18:14:40,999 | INFO     | current chi2=1.6102905397131062 (change=0.4337650680134629 %)
[2025-10-12 14:15:30] 2025-10-12 18:14:40,999 | INFO     | right removable region: 307
[2025-10-12 14:15:30] 2025-10-12 18:14:40,999 | INFO     | sum of square deviations: 9508071741.49521
[2025-10-12 14:15:30] 2025-10-12 18:14:40,998 | INFO     | monitor loop #1150: job 0:6839317537 is in state 'finished'
[2025-10-12 14:15:30] 2025-10-12 18:14:41,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,068 | INFO     | sum of deviations: -39102148066.14699
[2025-10-12 14:15:30] 2025-10-12 18:14:41,068 | INFO     | mean x: 1760283294.9105432
[2025-10-12 14:15:30] 2025-10-12 18:14:41,068 | INFO     | mean y: 2253204.9233226837
[2025-10-12 14:15:30] 2025-10-12 18:14:41,068 | INFO     | -- intersect: 7241455843.200115
[2025-10-12 14:15:30] 2025-10-12 18:14:41,068 | INFO     | intersect: 7241455843.200115
[2025-10-12 14:15:30] 2025-10-12 18:14:41,069 | INFO     | chi2: 3.0676166082704075
[2025-10-12 14:15:30] 2025-10-12 18:14:41,069 | INFO     | current chi2=3.0676166082704075 (change=30.648029598619587 %)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,069 | INFO     | sum of square deviations: 9059586684.970781
[2025-10-12 14:15:30] 2025-10-12 18:14:41,103 | INFO     | sum of deviations: -33054627204.59091
[2025-10-12 14:15:30] 2025-10-12 18:14:41,103 | INFO     | mean x: 1760283447.418831
[2025-10-12 14:15:30] 2025-10-12 18:14:41,103 | INFO     | mean y: 2251146.1363636362
[2025-10-12 14:15:30] 2025-10-12 18:14:41,103 | INFO     | -- intersect: 6424786207.848092
[2025-10-12 14:15:30] 2025-10-12 18:14:41,103 | INFO     | intersect: 6424786207.848092
[2025-10-12 14:15:30] 2025-10-12 18:14:41,104 | INFO     | chi2: 3.035150374238226
[2025-10-12 14:15:30] 2025-10-12 18:14:41,104 | INFO     | current chi2=3.035150374238226 (change=1.0583537051094114 %)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,104 | INFO     | left removable region: 20
[2025-10-12 14:15:30] 2025-10-12 18:14:41,104 | INFO     | sum of square deviations: 7329883121.742159
[2025-10-12 14:15:30] 2025-10-12 18:14:41,138 | INFO     | sum of deviations: 48403219360.790924
[2025-10-12 14:15:30] 2025-10-12 18:14:41,139 | INFO     | mean x: 1760283416.9337978
[2025-10-12 14:15:30] 2025-10-12 18:14:41,139 | INFO     | mean y: 2272848.567944251
[2025-10-12 14:15:30] 2025-10-12 18:14:41,139 | INFO     | -- intersect: -11621839426.056995
[2025-10-12 14:15:30] 2025-10-12 18:14:41,139 | INFO     | intersect: -11621839426.056995
[2025-10-12 14:15:30] 2025-10-12 18:14:41,139 | INFO     | chi2: 0.12413680530291543
[2025-10-12 14:15:30] 2025-10-12 18:14:41,139 | INFO     | -- intersect: -11621839426.056995
[2025-10-12 14:15:30] 2025-10-12 18:14:41,140 | INFO     | current memory leak: 6.60 B/s (using 287 data points, chi2=0.12)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,140 | INFO     | could have reported an average CPU frequency of 2685 MHz (14 samples)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | ..............................
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . Timing measurements:
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . get job = 0 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . initial setup = 2 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . payload setup = 6 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . stage-in = 0 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . payload execution = 19344 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . stage-out = 8 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | . log creation = 2 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,178 | INFO     | ..............................
[2025-10-12 14:15:30] 2025-10-12 18:14:41,494 | INFO     | 
[2025-10-12 14:15:30] 2025-10-12 18:14:41,494 | INFO     | job summary report
[2025-10-12 14:15:30] 2025-10-12 18:14:41,494 | INFO     | --------------------------------------------------
[2025-10-12 14:15:30] 2025-10-12 18:14:41,494 | INFO     | PanDA job id: 6839317537
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | task id: 46676269
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | errors: (none)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | pilot state: finished 
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | transexitcode: 0
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | exeerrorcode: 0
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | exeerrordiag: 
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | exitcode: 0
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | exitmsg: OK
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | cpuconsumptiontime: 45384 s
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | nevents: 400
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | neventsw: 0
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | pid: 75316
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | pgrp: 75316
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | corecount: 11
[2025-10-12 14:15:30] 2025-10-12 18:14:41,495 | INFO     | event service: False
[2025-10-12 14:15:30] 2025-10-12 18:14:41,496 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 19357: 2382206, 19365: 2391388, 19420: 2391526}
[2025-10-12 14:15:30] 2025-10-12 18:14:41,496 | INFO     | --------------------------------------------------
[2025-10-12 14:15:30] 2025-10-12 18:14:41,496 | INFO     | 
[2025-10-12 14:15:30] 2025-10-12 18:14:41,496 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:15:30] 2025-10-12 18:14:41,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:15:30] 2025-10-12 18:14:41,686 | INFO     | job 6839317537 has completed (purged errors)
[2025-10-12 14:15:30] 2025-10-12 18:14:41,687 | INFO     | overall cleanup function is called
[2025-10-12 14:15:30] 2025-10-12 18:14:42,764 | INFO     | --- collectZombieJob: --- 10, [75316]
[2025-10-12 14:15:30] 2025-10-12 18:14:42,765 | INFO     | zombie collector waiting for pid 75316
[2025-10-12 14:15:30] 2025-10-12 18:14:42,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:15:30] 2025-10-12 18:14:42,765 | INFO     | collected zombie processes
[2025-10-12 14:15:30] 2025-10-12 18:14:42,765 | INFO     | will attempt to kill all subprocesses of pid=75316
[2025-10-12 14:15:30] 2025-10-12 18:14:44,571 | INFO     | process IDs to be killed: [75316] (in reverse order)
[2025-10-12 14:15:30] 2025-10-12 18:14:45,149 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:15:30] 2025-10-12 18:14:45,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:15:30] 2025-10-12 18:14:45,186 | INFO     | did not find any defunct processes belonging to 75316
[2025-10-12 14:15:30] 2025-10-12 18:14:45,297 | INFO     | did not find any defunct processes belonging to 75316
[2025-10-12 14:15:30] 2025-10-12 18:14:45,298 | INFO     | ready for new job
[2025-10-12 14:15:30] 2025-10-12 18:14:45,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:15:30] 2025-10-12 18:14:45,305 | INFO     | ***************************************
[2025-10-12 14:15:30] 2025-10-12 18:14:45,305 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:15:30] 2025-10-12 18:14:45,305 | INFO     | ***************************************
[2025-10-12 14:15:30] 2025-10-12 18:14:45,305 | INFO     | 
[2025-10-12 14:15:30] 2025-10-12 18:14:45,322 | INFO     | architecture information:
[2025-10-12 14:15:30] 2025-10-12 18:14:45,323 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:15:30] 2025-10-12 18:14:45,418 | INFO     | cat /etc/os-release:
[2025-10-12 14:15:30] NAME="CentOS Linux"
[2025-10-12 14:15:30] VERSION="7 (Core)"
[2025-10-12 14:15:30] ID="centos"
[2025-10-12 14:15:30] ID_LIKE="rhel fedora"
[2025-10-12 14:15:30] VERSION_ID="7"
[2025-10-12 14:15:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:15:30] ANSI_COLOR="0;31"
[2025-10-12 14:15:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:15:30] HOME_URL="https://www.centos.org/"
[2025-10-12 14:15:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:15:30] 
[2025-10-12 14:15:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:15:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:15:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:15:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:15:30] 
[2025-10-12 14:15:30] 2025-10-12 18:14:45,418 | INFO     | ***************************************
[2025-10-12 14:15:30] 2025-10-12 18:14:45,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:15:30] 2025-10-12 18:14:46,107 | INFO     | sufficient remaining disk space (55178166272 B)
[2025-10-12 14:15:30] 2025-10-12 18:14:46,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:15:30] 2025-10-12 18:14:46,108 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:15:30] 2025-10-12 18:14:46,108 | INFO     | update_server=False
[2025-10-12 14:15:30] 2025-10-12 18:14:46,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:15:30] 2025-10-12 18:14:46,135 | INFO     | all data control threads have been joined
[2025-10-12 14:15:30] 2025-10-12 18:14:46,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:15:30] 2025-10-12 18:14:46,697 | INFO     | all job control threads have been joined
[2025-10-12 14:15:30] 2025-10-12 18:14:47,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:15:30] 2025-10-12 18:14:47,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:15:30] 2025-10-12 18:14:47,091 | INFO     | aborting loop
[2025-10-12 14:15:30] 2025-10-12 18:14:47,115 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,174 | INFO     | [data] control thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,202 | INFO     | all payload control threads have been joined
[2025-10-12 14:15:30] 2025-10-12 18:14:47,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:15:30] 2025-10-12 18:14:47,385 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,526 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,535 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,535 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,547 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,651 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,664 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,703 | INFO     | [job] control thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:47,845 | INFO     | [job] validate thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:48,107 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:48,208 | INFO     | [payload] control thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:49,421 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:14:51,132 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:15:30] 2025-10-12 18:15:16,348 | INFO     | PID=68778 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:15:30] 2025-10-12 18:15:16,348 | INFO     | .. there are 17 such processes running
[2025-10-12 14:15:30] 2025-10-12 18:15:16,348 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:15:30] 2025-10-12 18:15:16,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:15:30] 2025-10-12 18:15:16,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:15:30] 2025-10-12 18:15:19,813 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:15:30] 2025-10-12 18:15:21,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002594301760)>', '<ExcThread(monitor, started 140001966810880)>']
[2025-10-12 14:15:30] 2025-10-12 18:15:22,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:15:30] 2025-10-12 18:15:22,419 | INFO     | [monitor] control thread has ended
[2025-10-12 14:15:30] 2025-10-12 18:15:26,694 | INFO     | all workflow threads have been joined
[2025-10-12 14:15:30] 2025-10-12 18:15:26,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:15:30] 2025-10-12 18:15:26,695 | INFO     | traces error code: 0
[2025-10-12 14:15:30] 2025-10-12 18:15:26,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:15:30] 2025-10-12 18:15:28,949 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:15:30] 2025-10-12 18:15:29,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:15:30] 2025-10-12 18:15:29,038 [wrapper] pilotpid: 68778
[2025-10-12 14:15:30] 2025-10-12 18:15:29,116 [wrapper] Pilot exit status: 0
[2025-10-12 14:15:30] 2025-10-12 18:15:29,326 [wrapper] pandaids: 6839317537
[2025-10-12 14:15:30] 2025-10-12 18:15:29,879 [wrapper] cleanup supervisor_pilot  905737 68779
[2025-10-12 14:15:30] 2025-10-12 18:15:29,915 [wrapper] Test setup, not cleaning
[2025-10-12 14:15:30] 2025-10-12 18:15:29,965 [wrapper] apfmon messages muted
[2025-10-12 14:15:30] 2025-10-12 18:15:29,999 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:15:30] 2025-10-12 18:15:30,038 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:15:30]  *** Error codes and diagnostics ***
[2025-10-12 14:15:30]     "exeErrorCode": 0,
[2025-10-12 14:15:30]     "exeErrorDiag": "",
[2025-10-12 14:15:30]     "pilotErrorCode": 0,
[2025-10-12 14:15:30]     "pilotErrorDiag": "",
[2025-10-12 14:15:30]  *** Listing of results directory ***
[2025-10-12 14:15:31] total 421212
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 22:49 pilot3.tar.gz
[2025-10-12 14:15:31] -rwx------. 1 boincer umatlas     36292 Oct 11 22:55 runpilot2-wrapper.sh
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 22:55 queuedata.json
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:15:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:50 run_atlas
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:50 job.xml
[2025-10-12 14:15:31] -rw-r--r--. 2 boincer umatlas 222109348 Oct 12 08:50 EVNT.46676267._003192.pool.root.1
[2025-10-12 14:15:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:50 start_atlas.sh
[2025-10-12 14:15:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:50 shared
[2025-10-12 14:15:31] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 08:50 input.tar.gz
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:50 boinc_lockfile
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 08:50 pandaJob.out
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas    975512 Oct 12 08:50 agis_schedconf.cvmfs.json
[2025-10-12 14:15:31] drwx------. 5 boincer umatlas      4096 Oct 12 08:50 pilot3
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas 199400479 Oct 12 14:09 HITS.46676269._069576.pool.root.1
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas       531 Oct 12 14:10 boinc_task_state.xml
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 14:13 init_data.xml
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas      1042 Oct 12 14:13 memory_monitor_summary.json
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas    571248 Oct 12 14:13 log.46676269._069576.job.log.tgz.1
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas        95 Oct 12 14:14 pilot_heartbeat.json
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas      7830 Oct 12 14:14 heartbeat.json
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas      4822 Oct 12 14:15 pilotlog.txt
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:15 boinc_mmap_file
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:15 wrapper_checkpoint.txt
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas   2383924 Oct 12 14:15 log.46676269._069576.job.log.1
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas       357 Oct 12 14:15 output.list
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:15 runtime_log
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas   2969600 Oct 12 14:15 result.tar.gz
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas      8711 Oct 12 14:15 runtime_log.err
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas       657 Oct 12 14:15 jZULDmHQ1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZOiNDmpBg4Xn.diag
[2025-10-12 14:15:31] -rw-r--r--. 1 boincer umatlas     21011 Oct 12 14:15 stderr.txt
[2025-10-12 14:15:31] HITS file was successfully produced:
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas 199400479 Oct 12 14:09 shared/HITS.pool.root.1
[2025-10-12 14:15:31]  *** Contents of shared directory: ***
[2025-10-12 14:15:31] total 415116
[2025-10-12 14:15:31] -rw-r--r--. 2 boincer umatlas 222109348 Oct 12 08:50 ATLAS.root_0
[2025-10-12 14:15:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:50 start_atlas.sh
[2025-10-12 14:15:31] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 08:50 input.tar.gz
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas 199400479 Oct 12 14:09 HITS.pool.root.1
[2025-10-12 14:15:31] -rw-------. 1 boincer umatlas   2969600 Oct 12 14:15 result.tar.gz
14:15:32 (65086): run_atlas exited; CPU time 46010.621536
14:15:32 (65086): called boinc_finish(0)

</stderr_txt>
]]>

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