Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:53 (1664028): wrapper (7.7.26015): starting
10:46:53 (1664028): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 10:46:53] Arguments: --nthreads 9
[2025-10-12 10:46:53] Threads: 9
[2025-10-12 10:46:53] Checking for CVMFS
[2025-10-12 10:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:47:16] 2.13.2.0 5291 5816 109664 151623 3 64 32889656 40960001 12123 16776704 0 11921709 99.922 2225480 35502 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:47:16] CVMFS is ok
[2025-10-12 10:47:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:47:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:47:16] Further information can be found at the LHC@home message board.
[2025-10-12 10:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:47:16] Checking for apptainer binary...
[2025-10-12 10:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:47:16] Running /usr/bin/apptainer --version
[2025-10-12 10:47:16] apptainer version 1.4.3-1.el9
[2025-10-12 10:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:47:17] c-210-37-3.aglt2.org
[2025-10-12 10:47:17] apptainer works
[2025-10-12 10:47:17] Set ATHENA_PROC_NUMBER=9
[2025-10-12 10:47:17] Set ATHENA_CORE_NUMBER=9
[2025-10-12 10:47:17] Starting ATLAS job with PandaID=6839637138
[2025-10-12 10:47:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:19:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:19:32] 2025-10-12 22:18:38,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:19:32] 2025-10-12 22:18:39,124 | INFO     | time since job start (27005s) is within the limit (172800.0s)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,562 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 18:19:32] 2025-10-12 22:18:40,565 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2491.647482142858
[2025-10-12 18:19:32] 2025-10-12 22:18:40,588 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839637138/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,589 | INFO     | extracted standard info from prmon json
[2025-10-12 18:19:32] 2025-10-12 22:18:40,594 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:19:32] 2025-10-12 22:18:40,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:19:32] 2025-10-12 22:18:40,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:19:32] 2025-10-12 22:18:40,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:19:32] 2025-10-12 22:18:40,612 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:19:32] 2025-10-12 22:18:40,613 | INFO     | sum of square deviations: 26413920120.0
[2025-10-12 18:19:32] 2025-10-12 22:18:40,628 | INFO     | sum of deviations: 113736343006.00002
[2025-10-12 18:19:32] 2025-10-12 22:18:40,628 | INFO     | mean x: 1760294073.0
[2025-10-12 18:19:32] 2025-10-12 22:18:40,628 | INFO     | mean y: 2537817.2
[2025-10-12 18:19:32] 2025-10-12 22:18:40,628 | INFO     | -- intersect: -7577155373.685475
[2025-10-12 18:19:32] 2025-10-12 22:18:40,628 | INFO     | intersect: -7577155373.685475
[2025-10-12 18:19:32] 2025-10-12 22:18:40,637 | INFO     | chi2: 3.3706307711942376
[2025-10-12 18:19:32] 2025-10-12 22:18:40,638 | INFO     | sum of square deviations: 25523674040.74484
[2025-10-12 18:19:32] 2025-10-12 22:18:40,654 | INFO     | sum of deviations: 142802351991.9518
[2025-10-12 18:19:32] 2025-10-12 22:18:40,654 | INFO     | mean x: 1760293920.5034482
[2025-10-12 18:19:32] 2025-10-12 22:18:40,654 | INFO     | mean y: 2542747.3655172414
[2025-10-12 18:19:32] 2025-10-12 22:18:40,654 | INFO     | -- intersect: -9846122129.16221
[2025-10-12 18:19:32] 2025-10-12 22:18:40,654 | INFO     | intersect: -9846122129.16221
[2025-10-12 18:19:32] 2025-10-12 22:18:40,655 | INFO     | chi2: 2.5534596977620447
[2025-10-12 18:19:32] 2025-10-12 22:18:40,655 | INFO     | current chi2=2.5534596977620447 (change=24.24386202178602 %)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,655 | INFO     | right removable region: 434
[2025-10-12 18:19:32] 2025-10-12 22:18:40,656 | INFO     | sum of square deviations: 25523593154.74484
[2025-10-12 18:19:32] 2025-10-12 22:18:40,679 | INFO     | sum of deviations: 1736641785.868969
[2025-10-12 18:19:32] 2025-10-12 22:18:40,679 | INFO     | mean x: 1760294225.5034482
[2025-10-12 18:19:32] 2025-10-12 22:18:40,679 | INFO     | mean y: 2556965.420689655
[2025-10-12 18:19:32] 2025-10-12 22:18:40,685 | INFO     | -- intersect: -117214592.16914935
[2025-10-12 18:19:32] 2025-10-12 22:18:40,685 | INFO     | intersect: -117214592.16914935
[2025-10-12 18:19:32] 2025-10-12 22:18:40,692 | INFO     | chi2: 0.9754177788929912
[2025-10-12 18:19:32] 2025-10-12 22:18:40,692 | INFO     | current chi2=0.9754177788929912 (change=71.06126879191238 %)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,693 | INFO     | sum of square deviations: 24653499126.979145
[2025-10-12 18:19:32] 2025-10-12 22:18:40,708 | INFO     | sum of deviations: -18191054700.646507
[2025-10-12 18:19:32] 2025-10-12 22:18:40,709 | INFO     | mean x: 1760294378.0069768
[2025-10-12 18:19:32] 2025-10-12 22:18:40,709 | INFO     | mean y: 2560450.548837209
[2025-10-12 18:19:32] 2025-10-12 22:18:40,709 | INFO     | -- intersect: 1301427242.4243612
[2025-10-12 18:19:32] 2025-10-12 22:18:40,709 | INFO     | intersect: 1301427242.4243612
[2025-10-12 18:19:32] 2025-10-12 22:18:40,719 | INFO     | chi2: 0.8990974649163291
[2025-10-12 18:19:32] 2025-10-12 22:18:40,720 | INFO     | current chi2=0.8990974649163291 (change=7.824371836166298 %)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,720 | INFO     | left removable region: 20
[2025-10-12 18:19:32] 2025-10-12 22:18:40,721 | INFO     | sum of square deviations: 22002610105.961304
[2025-10-12 18:19:32] 2025-10-12 22:18:40,726 | INFO     | sum of deviations: 15505872792.835745
[2025-10-12 18:19:32] 2025-10-12 22:18:40,726 | INFO     | mean x: 1760294500.009662
[2025-10-12 18:19:32] 2025-10-12 22:18:40,726 | INFO     | mean y: 2564988.541062802
[2025-10-12 18:19:32] 2025-10-12 22:18:40,726 | INFO     | -- intersect: -1237965224.1759746
[2025-10-12 18:19:32] 2025-10-12 22:18:40,727 | INFO     | intersect: -1237965224.1759746
[2025-10-12 18:19:32] 2025-10-12 22:18:40,727 | INFO     | chi2: 0.05865295837278516
[2025-10-12 18:19:32] 2025-10-12 22:18:40,740 | INFO     | -- intersect: -1237965224.1759746
[2025-10-12 18:19:32] 2025-10-12 22:18:40,740 | INFO     | current memory leak: 0.70 B/s (using 414 data points, chi2=0.06)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | could have reported an average CPU frequency of 2581 MHz (18 samples)
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | ..............................
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | . Timing measurements:
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | . get job = 0 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | . initial setup = 5 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | . payload setup = 45 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | . stage-in = 0 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,742 | INFO     | . payload execution = 26847 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,743 | INFO     | . stage-out = 5 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,743 | INFO     | . log creation = 1 s
[2025-10-12 18:19:32] 2025-10-12 22:18:40,743 | INFO     | ..............................
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | 
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | job summary report
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | --------------------------------------------------
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | PanDA job id: 6839637138
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | task id: 46676269
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | errors: (none)
[2025-10-12 18:19:32] 2025-10-12 22:18:41,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | pilot state: finished 
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | transexitcode: 0
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | exeerrorcode: 0
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | exeerrordiag: 
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | exitcode: 0
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | exitmsg: OK
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | cpuconsumptiontime: 51068 s
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | nevents: 400
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | neventsw: 0
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | pid: 1678402
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | pgrp: 1678402
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | corecount: 9
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | event service: False
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | sizes: {0: 2348023, 1: 2348624, 2: 2348708, 3: 2348764, 4: 2348764, 5: 2348935, 6: 2349119, 17: 2349147, 28: 2349175, 40: 2349405, 41: 2349493, 51: 2349801, 26897:
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | --------------------------------------------------
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | 
[2025-10-12 18:19:32] 2025-10-12 22:18:41,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:19:32] 2025-10-12 22:18:41,180 | INFO     | time since job start (27007s) is within the limit (172800.0s)
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | job 6839637138 has completed (purged errors)
[2025-10-12 18:19:32] 2025-10-12 22:18:41,268 | INFO     | overall cleanup function is called
[2025-10-12 18:19:32] 2025-10-12 22:18:42,278 | INFO     | --- collectZombieJob: --- 10, [1678402]
[2025-10-12 18:19:32] 2025-10-12 22:18:42,278 | INFO     | zombie collector waiting for pid 1678402
[2025-10-12 18:19:32] 2025-10-12 22:18:42,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:19:32] 2025-10-12 22:18:42,278 | INFO     | collected zombie processes
[2025-10-12 18:19:32] 2025-10-12 22:18:42,278 | INFO     | will attempt to kill all subprocesses of pid=1678402
[2025-10-12 18:19:32] 2025-10-12 22:18:43,050 | INFO     | process IDs to be killed: [1678402] (in reverse order)
[2025-10-12 18:19:32] 2025-10-12 22:18:43,565 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:19:32] 2025-10-12 22:18:43,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:19:32] 2025-10-12 22:18:43,591 | INFO     | did not find any defunct processes belonging to 1678402
[2025-10-12 18:19:32] 2025-10-12 22:18:43,607 | INFO     | did not find any defunct processes belonging to 1678402
[2025-10-12 18:19:32] 2025-10-12 22:18:43,608 | INFO     | ready for new job
[2025-10-12 18:19:32] 2025-10-12 22:18:43,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:19:32] 2025-10-12 22:18:43,612 | INFO     | ***************************************
[2025-10-12 18:19:32] 2025-10-12 22:18:43,612 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:19:32] 2025-10-12 22:18:43,612 | INFO     | ***************************************
[2025-10-12 18:19:32] 2025-10-12 22:18:43,612 | INFO     | 
[2025-10-12 18:19:32] 2025-10-12 22:18:43,616 | INFO     | architecture information:
[2025-10-12 18:19:32] 2025-10-12 22:18:43,617 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:19:32] 2025-10-12 22:18:43,661 | INFO     | cat /etc/os-release:
[2025-10-12 18:19:32] NAME="CentOS Linux"
[2025-10-12 18:19:32] VERSION="7 (Core)"
[2025-10-12 18:19:32] ID="centos"
[2025-10-12 18:19:32] ID_LIKE="rhel fedora"
[2025-10-12 18:19:32] VERSION_ID="7"
[2025-10-12 18:19:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:19:32] ANSI_COLOR="0;31"
[2025-10-12 18:19:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:19:32] HOME_URL="https://www.centos.org/"
[2025-10-12 18:19:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:19:32] 
[2025-10-12 18:19:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:19:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:19:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:19:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:19:32] 
[2025-10-12 18:19:32] 2025-10-12 22:18:43,661 | INFO     | ***************************************
[2025-10-12 18:19:32] 2025-10-12 22:18:44,165 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:19:32] 2025-10-12 22:18:44,271 | INFO     | sufficient remaining disk space (74812751872 B)
[2025-10-12 18:19:32] 2025-10-12 22:18:44,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:19:32] 2025-10-12 22:18:44,271 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:19:32] 2025-10-12 22:18:44,271 | INFO     | update_server=False
[2025-10-12 18:19:32] 2025-10-12 22:18:44,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:19:32] 2025-10-12 22:18:44,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:19:32] 2025-10-12 22:18:44,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:19:32] 2025-10-12 22:18:44,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:19:32] 2025-10-12 22:18:44,654 | INFO     | aborting loop
[2025-10-12 18:19:32] 2025-10-12 22:18:44,825 | INFO     | all payload control threads have been joined
[2025-10-12 18:19:32] 2025-10-12 22:18:44,864 | INFO     | all data control threads have been joined
[2025-10-12 18:19:32] 2025-10-12 22:18:45,244 | INFO     | all job control threads have been joined
[2025-10-12 18:19:32] 2025-10-12 22:18:45,286 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:45,659 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:45,702 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:45,838 | INFO     | [payload] control thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:45,884 | INFO     | [data] control thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:45,973 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:19:32] 2025-10-12 22:18:46,275 | INFO     | [job] control thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,316 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,358 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,471 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,722 | INFO     | [job] validate thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,737 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:46,744 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:47,202 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:18:48,281 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:19:32] 2025-10-12 22:19:16,980 | INFO     | PID=1667909 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:19:32] 2025-10-12 22:19:16,980 | INFO     | .. there are 9 such processes running
[2025-10-12 18:19:32] 2025-10-12 22:19:16,981 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:19:32] 2025-10-12 22:19:17,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:19:32] 2025-10-12 22:19:17,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:19:32] 2025-10-12 22:19:23,951 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:19:32] 2025-10-12 22:19:25,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330256783168)>', '<ExcThread(monitor, started 140329348994816)>']
[2025-10-12 18:19:32] 2025-10-12 22:19:26,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:19:32] 2025-10-12 22:19:26,145 | INFO     | [monitor] control thread has ended
[2025-10-12 18:19:32] 2025-10-12 22:19:30,231 | INFO     | all workflow threads have been joined
[2025-10-12 18:19:32] 2025-10-12 22:19:30,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:19:32] 2025-10-12 22:19:30,232 | INFO     | traces error code: 0
[2025-10-12 18:19:32] 2025-10-12 22:19:30,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:19:32] 2025-10-12 22:19:32,411 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:19:32] 2025-10-12 22:19:32,414 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:19:32] 2025-10-12 22:19:32,417 [wrapper] pilotpid: 1667909
[2025-10-12 18:19:32] 2025-10-12 22:19:32,423 [wrapper] Pilot exit status: 0
[2025-10-12 18:19:32] 2025-10-12 22:19:32,439 [wrapper] pandaids: 6839637138
[2025-10-12 18:19:32] 2025-10-12 22:19:32,502 [wrapper] cleanup supervisor_pilot 2263623 1667910
[2025-10-12 18:19:32] 2025-10-12 22:19:32,505 [wrapper] Test setup, not cleaning
[2025-10-12 18:19:32] 2025-10-12 22:19:32,508 [wrapper] apfmon messages muted
[2025-10-12 18:19:32] 2025-10-12 22:19:32,511 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:19:32] 2025-10-12 22:19:32,514 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:19:32]  *** Error codes and diagnostics ***
[2025-10-12 18:19:32]     "exeErrorCode": 0,
[2025-10-12 18:19:32]     "exeErrorDiag": "",
[2025-10-12 18:19:32]     "pilotErrorCode": 0,
[2025-10-12 18:19:32]     "pilotErrorDiag": "",
[2025-10-12 18:19:32]  *** Listing of results directory ***
[2025-10-12 18:19:32] total 424032
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 03:11 queuedata.json
[2025-10-12 18:19:32] -rwx------. 1 boincer umatlas     36292 Oct 12 03:12 runpilot2-wrapper.sh
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:19:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:46 run_atlas
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:46 job.xml
[2025-10-12 18:19:32] -rw-r--r--. 2 boincer umatlas 222575902 Oct 12 10:46 EVNT.46676267._003496.pool.root.1
[2025-10-12 18:19:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:46 start_atlas.sh
[2025-10-12 18:19:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:46 shared
[2025-10-12 18:19:32] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 10:46 input.tar.gz
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:46 boinc_lockfile
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 10:47 pandaJob.out
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas    975528 Oct 12 10:48 agis_schedconf.cvmfs.json
[2025-10-12 18:19:32] drwx------. 5 boincer umatlas      4096 Oct 12 10:48 pilot3
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas 199998274 Oct 12 18:17 HITS.46676269._073396.pool.root.1
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas       531 Oct 12 18:17 boinc_task_state.xml
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas      1042 Oct 12 18:18 memory_monitor_summary.json
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas    610428 Oct 12 18:18 log.46676269._073396.job.log.tgz.1
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas      7825 Oct 12 18:18 heartbeat.json
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 18:18 init_data.xml
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas        95 Oct 12 18:19 pilot_heartbeat.json
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:19 wrapper_checkpoint.txt
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas      4823 Oct 12 18:19 pilotlog.txt
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:19 boinc_mmap_file
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas   3254622 Oct 12 18:19 log.46676269._073396.job.log.1
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas       357 Oct 12 18:19 output.list
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:19 runtime_log
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas   3880960 Oct 12 18:19 result.tar.gz
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 18:19 runtime_log.err
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas       658 Oct 12 18:19 pgQLDmtQ5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmziNDmXw5gzn.diag
[2025-10-12 18:19:32] -rw-r--r--. 1 boincer umatlas     21235 Oct 12 18:19 stderr.txt
[2025-10-12 18:19:32] HITS file was successfully produced:
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas 199998274 Oct 12 18:17 shared/HITS.pool.root.1
[2025-10-12 18:19:32]  *** Contents of shared directory: ***
[2025-10-12 18:19:32] total 417048
[2025-10-12 18:19:32] -rw-r--r--. 2 boincer umatlas 222575902 Oct 12 10:46 ATLAS.root_0
[2025-10-12 18:19:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:46 start_atlas.sh
[2025-10-12 18:19:32] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 10:46 input.tar.gz
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas 199998274 Oct 12 18:17 HITS.pool.root.1
[2025-10-12 18:19:32] -rw-------. 1 boincer umatlas   3880960 Oct 12 18:19 result.tar.gz
18:19:34 (1664028): run_atlas exited; CPU time 51740.884543
18:19:34 (1664028): called boinc_finish(0)

</stderr_txt>
]]>

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