Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:58 (3103311): wrapper (7.7.26015): starting
08:58:58 (3103311): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 08:58:58] Arguments: --nthreads 9
[2025-10-12 08:58:58] Threads: 9
[2025-10-12 08:58:58] Checking for CVMFS
[2025-10-12 08:58:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:58:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:58:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:58:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:58:59] 2.13.2.0 5086 24029 253112 151620 2 617 28351313 32935936 55981 16776704 0 192480635 99.720 142452639 19572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 08:58:59] CVMFS is ok
[2025-10-12 08:58:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:58:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:58:59] Further information can be found at the LHC@home message board.
[2025-10-12 08:58:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:58:59] Checking for apptainer binary...
[2025-10-12 08:58:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:58:59] Running /usr/bin/apptainer --version
[2025-10-12 08:58:59] apptainer version 1.4.3-1.el9
[2025-10-12 08:58:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:58:59] c7-7-35.aglt2.org
[2025-10-12 08:58:59] apptainer works
[2025-10-12 08:58:59] Set ATHENA_PROC_NUMBER=9
[2025-10-12 08:58:59] Set ATHENA_CORE_NUMBER=9
[2025-10-12 08:58:59] Starting ATLAS job with PandaID=6839386622
[2025-10-12 08:58:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:04:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:04:15] 2025-10-12 15:03:40,915 | INFO     | intersect: -69366182761.20422
[2025-10-12 11:04:15] 2025-10-12 15:03:40,915 | INFO     | chi2: 2.6264418319137466
[2025-10-12 11:04:15] 2025-10-12 15:03:40,915 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | sum of deviations: 27936624023.0
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | mean x: 1760277568.5
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | mean y: 2167923.206896552
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | -- intersect: -101607483719.0536
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | intersect: -101607483719.0536
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | chi2: 1.947532976629987
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | current chi2=1.947532976629987 (change=25.848996426815035 %)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,916 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 11:04:15] 2025-10-12 15:03:40,917 | INFO     | sum of deviations: 26203357518.0
[2025-10-12 11:04:15] 2025-10-12 15:03:40,917 | INFO     | mean x: 1760277416.0
[2025-10-12 11:04:15] 2025-10-12 15:03:40,917 | INFO     | mean y: 2163511.3423423423
[2025-10-12 11:04:15] 2025-10-12 15:03:40,917 | INFO     | -- intersect: -108772049268.98798
[2025-10-12 11:04:15] 2025-10-12 15:03:40,917 | INFO     | intersect: -108772049268.98798
[2025-10-12 11:04:15] 2025-10-12 15:03:40,918 | INFO     | chi2: 1.9490498633187125
[2025-10-12 11:04:15] 2025-10-12 15:03:40,918 | INFO     | current chi2=1.9490498633187125 (change=-0.07788759969294329 %)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,918 | INFO     | right removable region: 110
[2025-10-12 11:04:15] 2025-10-12 15:03:40,918 | INFO     | sum of square deviations: 483978392.9913803
[2025-10-12 11:04:15] 2025-10-12 15:03:40,918 | INFO     | sum of deviations: 716019112.8706884
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | mean x: 1760277873.5086207
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | mean y: 2202036.629310345
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | -- intersect: -2602031168.0914474
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | intersect: -2602031168.0914474
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | chi2: 0.7838536998168822
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | current chi2=0.7838536998168822 (change=70.15529945143577 %)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,919 | INFO     | sum of square deviations: 424051382.9909904
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | sum of deviations: -1619562886.3693686
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | mean x: 1760278026.0090091
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | mean y: 2208014.3693693695
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | -- intersect: 6725169134.098335
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | intersect: 6725169134.098335
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | chi2: 0.7688958919057829
[2025-10-12 11:04:15] 2025-10-12 15:03:40,920 | INFO     | current chi2=0.7688958919057829 (change=1.908239753744057 %)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | left removable region: 20
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | sum of deviations: 3765648401.0
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | mean x: 1760277995.5
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | mean y: 2225542.822222222
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | -- intersect: -29324845764.45089
[2025-10-12 11:04:15] 2025-10-12 15:03:40,921 | INFO     | intersect: -29324845764.45089
[2025-10-12 11:04:15] 2025-10-12 15:03:40,922 | INFO     | chi2: 0.015004272032223267
[2025-10-12 11:04:15] 2025-10-12 15:03:40,922 | INFO     | -- intersect: -29324845764.45089
[2025-10-12 11:04:15] 2025-10-12 15:03:40,922 | INFO     | current memory leak: 16.66 B/s (using 90 data points, chi2=0.02)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,922 | INFO     | could have reported an average CPU frequency of 3297 MHz (8 samples)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,922 | INFO     | ..............................
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . Timing measurements:
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . get job = 1 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . initial setup = 5 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . payload setup = 22 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . stage-in = 0 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . payload execution = 7351 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . stage-out = 1 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | . log creation = 0 s
[2025-10-12 11:04:15] 2025-10-12 15:03:40,923 | INFO     | ..............................
[2025-10-12 11:04:15] 2025-10-12 15:03:40,975 | INFO     | sufficient remaining disk space (74156343296 B)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,976 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,984 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6839386622: 4002374 B (within 2537553920 B limit)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,985 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6839386622/HITS.46676269._070918.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,985 | INFO     | total size of present files: 0 B (workdir size: 4002374 B)
[2025-10-12 11:04:15] 2025-10-12 15:03:40,985 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6839386622/HITS.46676269._070918.pool.root.1 since it does not exist
[2025-10-12 11:04:15] 2025-10-12 15:03:41,021 | INFO     | 
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | job summary report
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | --------------------------------------------------
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | PanDA job id: 6839386622
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | task id: 46676269
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | errors: (none)
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | pilot state: finished 
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | transexitcode: 0
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | exeerrorcode: 0
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | exeerrordiag: 
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | exitcode: 0
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | exitmsg: OK
[2025-10-12 11:04:15] 2025-10-12 15:03:41,022 | INFO     | cpuconsumptiontime: 30910 s
[2025-10-12 11:04:15] 2025-10-12 15:03:41,023 | INFO     | nevents: 400
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | neventsw: 0
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | pid: 3120699
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | pgrp: 3120699
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | corecount: 9
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | event service: False
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2348885, 12: 2349175, 22: 2349203, 7377: 2376554, 7379: 2385552, 7382: 2385608, 7399: 2385830}
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | --------------------------------------------------
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | 
[2025-10-12 11:04:15] 2025-10-12 15:03:41,024 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | job 6839386622 has completed (purged errors)
[2025-10-12 11:04:15] 2025-10-12 15:03:41,168 | INFO     | overall cleanup function is called
[2025-10-12 11:04:15] 2025-10-12 15:03:41,801 | INFO     | number of running child processes to parent process 3120699: 1
[2025-10-12 11:04:15] 2025-10-12 15:03:41,801 | INFO     | maximum number of monitored processes: 6
[2025-10-12 11:04:15] 2025-10-12 15:03:41,801 | INFO     | aborting job monitoring since job object (job id=6839386622) has expired
[2025-10-12 11:04:15] 2025-10-12 15:03:42,187 | INFO     | --- collectZombieJob: --- 10, [3120699]
[2025-10-12 11:04:15] 2025-10-12 15:03:42,187 | INFO     | zombie collector waiting for pid 3120699
[2025-10-12 11:04:15] 2025-10-12 15:03:42,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:04:15] 2025-10-12 15:03:42,187 | INFO     | collected zombie processes
[2025-10-12 11:04:15] 2025-10-12 15:03:42,187 | INFO     | will attempt to kill all subprocesses of pid=3120699
[2025-10-12 11:04:15] 2025-10-12 15:03:43,538 | INFO     | process IDs to be killed: [3120699] (in reverse order)
[2025-10-12 11:04:15] 2025-10-12 15:03:43,863 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:04:15] 2025-10-12 15:03:43,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:04:15] 2025-10-12 15:03:43,896 | INFO     | did not find any defunct processes belonging to 3120699
[2025-10-12 11:04:15] 2025-10-12 15:03:43,924 | INFO     | did not find any defunct processes belonging to 3120699
[2025-10-12 11:04:15] 2025-10-12 15:03:43,924 | INFO     | ready for new job
[2025-10-12 11:04:15] 2025-10-12 15:03:43,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:04:15] 2025-10-12 15:03:43,926 | INFO     | ***************************************
[2025-10-12 11:04:15] 2025-10-12 15:03:43,926 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:04:15] 2025-10-12 15:03:43,926 | INFO     | ***************************************
[2025-10-12 11:04:15] 2025-10-12 15:03:43,926 | INFO     | 
[2025-10-12 11:04:15] 2025-10-12 15:03:43,931 | INFO     | architecture information:
[2025-10-12 11:04:15] 2025-10-12 15:03:43,931 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:04:15] 2025-10-12 15:03:44,017 | INFO     | cat /etc/os-release:
[2025-10-12 11:04:15] NAME="CentOS Linux"
[2025-10-12 11:04:15] VERSION="7 (Core)"
[2025-10-12 11:04:15] ID="centos"
[2025-10-12 11:04:15] ID_LIKE="rhel fedora"
[2025-10-12 11:04:15] VERSION_ID="7"
[2025-10-12 11:04:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:04:15] ANSI_COLOR="0;31"
[2025-10-12 11:04:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:04:15] HOME_URL="https://www.centos.org/"
[2025-10-12 11:04:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:04:15] 
[2025-10-12 11:04:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:04:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:04:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:04:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:04:15] 
[2025-10-12 11:04:15] 2025-10-12 15:03:44,017 | INFO     | ***************************************
[2025-10-12 11:04:15] 2025-10-12 15:03:44,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:04:15] 2025-10-12 15:03:44,564 | INFO     | sufficient remaining disk space (74161586176 B)
[2025-10-12 11:04:15] 2025-10-12 15:03:44,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:04:15] 2025-10-12 15:03:44,564 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:04:15] 2025-10-12 15:03:44,564 | INFO     | update_server=False
[2025-10-12 11:04:15] 2025-10-12 15:03:44,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:04:15] 2025-10-12 15:03:44,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:04:15] 2025-10-12 15:03:44,590 | INFO     | all payload control threads have been joined
[2025-10-12 11:04:15] 2025-10-12 15:03:44,591 | INFO     | all job control threads have been joined
[2025-10-12 11:04:15] 2025-10-12 15:03:44,617 | INFO     | all data control threads have been joined
[2025-10-12 11:04:15] 2025-10-12 15:03:45,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:04:15] 2025-10-12 15:03:45,316 | INFO     | aborting loop
[2025-10-12 11:04:15] 2025-10-12 15:03:45,573 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:45,601 | INFO     | [payload] control thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:45,601 | INFO     | [job] control thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:45,624 | INFO     | [data] control thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:45,687 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,039 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:04:15] 2025-10-12 15:03:46,205 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,312 | INFO     | [job] validate thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,321 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,375 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,430 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,572 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,990 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:46,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:47,083 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:47,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:04:15] 2025-10-12 15:03:51,740 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:04:15] 2025-10-12 15:03:55,237 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:04:15] 2025-10-12 15:03:57,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707776063296)>', '<ExcThread(monitor, started 140707503249152)>']
[2025-10-12 11:04:15] 2025-10-12 15:04:02,045 | INFO     | all workflow threads have been joined
[2025-10-12 11:04:15] 2025-10-12 15:04:02,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:04:15] 2025-10-12 15:04:02,046 | INFO     | traces error code: 0
[2025-10-12 11:04:15] 2025-10-12 15:04:02,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | INFO     | PID=3108733 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | INFO     | .. there are 87 such processes running
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:04:15] 2025-10-12 15:04:14,105 | INFO     | [monitor] control thread has ended
[2025-10-12 11:04:15] 2025-10-12 15:04:14,348 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:04:15] 2025-10-12 15:04:14,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:04:15] 2025-10-12 15:04:14,404 [wrapper] pilotpid: 3108733
[2025-10-12 11:04:15] 2025-10-12 15:04:14,417 [wrapper] Pilot exit status: 0
[2025-10-12 11:04:15] 2025-10-12 15:04:14,467 [wrapper] pandaids: 6839386622
[2025-10-12 11:04:15] 2025-10-12 15:04:14,764 [wrapper] cleanup supervisor_pilot 3876241 3108734
[2025-10-12 11:04:15] 2025-10-12 15:04:14,768 [wrapper] Test setup, not cleaning
[2025-10-12 11:04:15] 2025-10-12 15:04:14,779 [wrapper] apfmon messages muted
[2025-10-12 11:04:15] 2025-10-12 15:04:14,799 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:04:15] 2025-10-12 15:04:14,826 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:04:15]  *** Error codes and diagnostics ***
[2025-10-12 11:04:15]     "exeErrorCode": 0,
[2025-10-12 11:04:15]     "exeErrorDiag": "",
[2025-10-12 11:04:15]     "pilotErrorCode": 0,
[2025-10-12 11:04:15]     "pilotErrorDiag": "",
[2025-10-12 11:04:15]  *** Listing of results directory ***
[2025-10-12 11:04:15] total 417392
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:14 queuedata.json
[2025-10-12 11:04:15] -rwx------. 1 boincer umatlas     36292 Oct 12 00:15 runpilot2-wrapper.sh
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:04:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:58 run_atlas
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:58 job.xml
[2025-10-12 11:04:15] -rw-r--r--. 2 boincer umatlas 221352683 Oct 12 08:58 EVNT.46676267._003264.pool.root.1
[2025-10-12 11:04:15] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:58 shared
[2025-10-12 11:04:15] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 08:58 input.tar.gz
[2025-10-12 11:04:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:58 start_atlas.sh
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:58 boinc_lockfile
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 08:58 pandaJob.out
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas    975512 Oct 12 08:59 agis_schedconf.cvmfs.json
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:04:15] drwx------. 5 boincer umatlas      4096 Oct 12 08:59 pilot3
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas       530 Oct 12 11:02 boinc_task_state.xml
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas 199533617 Oct 12 11:02 HITS.46676269._070918.pool.root.1
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas      1033 Oct 12 11:03 memory_monitor_summary.json
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas      6932 Oct 12 11:03 init_data.xml
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas    379900 Oct 12 11:03 log.46676269._070918.job.log.tgz.1
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas        95 Oct 12 11:03 pilot_heartbeat.json
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas      7777 Oct 12 11:03 heartbeat.json
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:04 boinc_mmap_file
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas        27 Oct 12 11:04 wrapper_checkpoint.txt
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas       823 Oct 12 11:04 pilotlog.txt
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas    928740 Oct 12 11:04 log.46676269._070918.job.log.1
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas       357 Oct 12 11:04 output.list
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:04 runtime_log
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas   1331200 Oct 12 11:04 result.tar.gz
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 11:04 runtime_log.err
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas       651 Oct 12 11:04 QRNNDmIf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7BTMDmToOdwn.diag
[2025-10-12 11:04:15] -rw-r--r--. 1 boincer umatlas     21397 Oct 12 11:04 stderr.txt
[2025-10-12 11:04:15] HITS file was successfully produced:
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas 199533617 Oct 12 11:02 shared/HITS.pool.root.1
[2025-10-12 11:04:15]  *** Contents of shared directory: ***
[2025-10-12 11:04:15] total 412912
[2025-10-12 11:04:15] -rw-r--r--. 2 boincer umatlas 221352683 Oct 12 08:58 ATLAS.root_0
[2025-10-12 11:04:15] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 08:58 input.tar.gz
[2025-10-12 11:04:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:58 start_atlas.sh
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas 199533617 Oct 12 11:02 HITS.pool.root.1
[2025-10-12 11:04:15] -rw-------. 1 boincer umatlas   1331200 Oct 12 11:04 result.tar.gz
11:04:17 (3103311): run_atlas exited; CPU time 31216.775497
11:04:17 (3103311): called boinc_finish(0)

</stderr_txt>
]]>

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