Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:47:42 (2770142): wrapper (7.7.26015): starting
07:47:42 (2770142): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 07:47:42] Arguments: --nthreads 11
[2025-10-12 07:47:42] Threads: 11
[2025-10-12 07:47:42] Checking for CVMFS
[2025-10-12 07:47:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:47:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:47:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:47:43] 2.13.1.0 7481 77298 113248 151619 3 510 33806889 40960001 28684 16776704 0 446095324 99.778 253535814 45796 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:47:43] CVMFS is ok
[2025-10-12 07:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:47:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:47:43] Further information can be found at the LHC@home message board.
[2025-10-12 07:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:47:43] Checking for apptainer binary...
[2025-10-12 07:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:47:43] Running /usr/bin/apptainer --version
[2025-10-12 07:47:44] apptainer version 1.4.3-1.el9
[2025-10-12 07:47:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:47:45] c-208-38.aglt2.org
[2025-10-12 07:47:45] apptainer works
[2025-10-12 07:47:45] Set ATHENA_PROC_NUMBER=11
[2025-10-12 07:47:45] Set ATHENA_CORE_NUMBER=11
[2025-10-12 07:47:45] Starting ATLAS job with PandaID=6839592056
[2025-10-12 07:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:38:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:38:56] 2025-10-12 12:38:05,857 | INFO     | monitor loop #215: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:05,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:06,998 | INFO     | time since job start (2984s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:07,054 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 08:38:56] 2025-10-12 12:38:08,235 | INFO     | job 6839592056 has state=finished
[2025-10-12 08:38:56] 2025-10-12 12:38:08,236 | INFO     | preparing for final server update for job 6839592056 in state='finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:08,236 | INFO     | this job has now completed (state=finished)
[2025-10-12 08:38:56] 2025-10-12 12:38:08,236 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 08:38:56] 2025-10-12 12:38:08,236 | INFO     | log transfer has been attempted: DONE
[2025-10-12 08:38:56] 2025-10-12 12:38:08,236 | INFO     | job 6839592056 has finished - writing final server update
[2025-10-12 08:38:56] 2025-10-12 12:38:08,236 | INFO     | total number of processed events: 400 (read)
[2025-10-12 08:38:56] 2025-10-12 12:38:08,237 | INFO     | executing command: lscpu
[2025-10-12 08:38:56] 2025-10-12 12:38:08,331 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 08:38:56] 2025-10-12 12:38:08,362 | INFO     | monitor loop #216: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:08,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:09,006 | INFO     | time since job start (2987s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:10,810 | INFO     | PID=2774111 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 08:38:56] 2025-10-12 12:38:10,810 | INFO     | .. there are 22 such processes running
[2025-10-12 08:38:56] 2025-10-12 12:38:10,869 | INFO     | monitor loop #217: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:10,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:11,810 | INFO     | time since job start (2989s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:13,374 | INFO     | monitor loop #218: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:13,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:13,831 | INFO     | time since job start (2991s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:15,838 | INFO     | time since job start (2993s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:15,883 | INFO     | monitor loop #219: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:15,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:17,845 | INFO     | time since job start (2995s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:18,388 | INFO     | monitor loop #220: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:18,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:19,852 | INFO     | time since job start (2997s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:20,895 | INFO     | monitor loop #221: job 0:6839592056 is in state 'finished'
[2025-10-12 08:38:56] 2025-10-12 12:38:20,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:38:56] 2025-10-12 12:38:21,858 | INFO     | time since job start (2999s) is within the limit (172800.0s)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,608 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 08:38:56] 2025-10-12 12:38:22,613 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3773.5508749999995
[2025-10-12 08:38:56] 2025-10-12 12:38:22,625 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839592056/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,626 | INFO     | extracted standard info from prmon json
[2025-10-12 08:38:56] 2025-10-12 12:38:22,626 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:38:56] 2025-10-12 12:38:22,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:38:56] 2025-10-12 12:38:22,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:38:56] 2025-10-12 12:38:22,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | sum of square deviations: 21358540.975609746
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | sum of deviations: -1768809693.414634
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | mean x: 1760271301.0243902
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | mean y: 2687289.4146341463
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | -- intersect: 145779730011.90536
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | intersect: 145779730011.90536
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | chi2: 0.005151000256614782
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | -- intersect: 145779730011.90536
[2025-10-12 08:38:56] 2025-10-12 12:38:22,627 | INFO     | current memory leak: -82.82 B/s (using 41 data points, chi2=0.01)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,629 | INFO     | could have reported an average CPU frequency of 3738 MHz (5 samples)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,629 | INFO     | ..............................
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . Timing measurements:
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . get job = 0 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . initial setup = 4 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . payload setup = 20 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . stage-in = 0 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . payload execution = 2915 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . stage-out = 1 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | . log creation = 0 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,630 | INFO     | ..............................
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | 
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | job summary report
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | --------------------------------------------------
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | PanDA job id: 6839592056
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | task id: 46676269
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | errors: (none)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | pilot state: finished 
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | transexitcode: 0
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | exeerrorcode: 0
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | exeerrordiag: 
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | exitcode: 0
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | exitmsg: OK
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | cpuconsumptiontime: 23599 s
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | nevents: 400
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | neventsw: 0
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | pid: 2781300
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | pgrp: 2781300
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | corecount: 11
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | event service: False
[2025-10-12 08:38:56] 2025-10-12 12:38:22,680 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 18: 2349175, 23: 2349203, 2939: 2374768, 2940: 2383766, 2942: 2383822, 2958: 2384048}
[2025-10-12 08:38:56] 2025-10-12 12:38:22,681 | INFO     | --------------------------------------------------
[2025-10-12 08:38:56] 2025-10-12 12:38:22,681 | INFO     | 
[2025-10-12 08:38:56] 2025-10-12 12:38:22,681 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | job 6839592056 has completed (purged errors)
[2025-10-12 08:38:56] 2025-10-12 12:38:22,699 | INFO     | overall cleanup function is called
[2025-10-12 08:38:56] 2025-10-12 12:38:23,707 | INFO     | --- collectZombieJob: --- 10, [2781300]
[2025-10-12 08:38:56] 2025-10-12 12:38:23,708 | INFO     | zombie collector waiting for pid 2781300
[2025-10-12 08:38:56] 2025-10-12 12:38:23,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:38:56] 2025-10-12 12:38:23,708 | INFO     | collected zombie processes
[2025-10-12 08:38:56] 2025-10-12 12:38:23,708 | INFO     | will attempt to kill all subprocesses of pid=2781300
[2025-10-12 08:38:56] 2025-10-12 12:38:24,647 | INFO     | process IDs to be killed: [2781300] (in reverse order)
[2025-10-12 08:38:56] 2025-10-12 12:38:24,801 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:38:56] 2025-10-12 12:38:24,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:38:56] 2025-10-12 12:38:24,822 | INFO     | did not find any defunct processes belonging to 2781300
[2025-10-12 08:38:56] 2025-10-12 12:38:24,842 | INFO     | did not find any defunct processes belonging to 2781300
[2025-10-12 08:38:56] 2025-10-12 12:38:24,842 | INFO     | ready for new job
[2025-10-12 08:38:56] 2025-10-12 12:38:24,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:38:56] 2025-10-12 12:38:24,843 | INFO     | ***************************************
[2025-10-12 08:38:56] 2025-10-12 12:38:24,843 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:38:56] 2025-10-12 12:38:24,843 | INFO     | ***************************************
[2025-10-12 08:38:56] 2025-10-12 12:38:24,844 | INFO     | 
[2025-10-12 08:38:56] 2025-10-12 12:38:24,848 | INFO     | architecture information:
[2025-10-12 08:38:56] 2025-10-12 12:38:24,849 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:38:56] 2025-10-12 12:38:24,889 | INFO     | cat /etc/os-release:
[2025-10-12 08:38:56] NAME="CentOS Linux"
[2025-10-12 08:38:56] VERSION="7 (Core)"
[2025-10-12 08:38:56] ID="centos"
[2025-10-12 08:38:56] ID_LIKE="rhel fedora"
[2025-10-12 08:38:56] VERSION_ID="7"
[2025-10-12 08:38:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:38:56] ANSI_COLOR="0;31"
[2025-10-12 08:38:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:38:56] HOME_URL="https://www.centos.org/"
[2025-10-12 08:38:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:38:56] 
[2025-10-12 08:38:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:38:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:38:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:38:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:38:56] 
[2025-10-12 08:38:56] 2025-10-12 12:38:24,890 | INFO     | ***************************************
[2025-10-12 08:38:56] 2025-10-12 12:38:25,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:38:56] 2025-10-12 12:38:25,431 | INFO     | sufficient remaining disk space (170911596544 B)
[2025-10-12 08:38:56] 2025-10-12 12:38:25,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:38:56] 2025-10-12 12:38:25,431 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:38:56] 2025-10-12 12:38:25,431 | INFO     | update_server=False
[2025-10-12 08:38:56] 2025-10-12 12:38:25,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:38:56] 2025-10-12 12:38:25,674 | INFO     | all data control threads have been joined
[2025-10-12 08:38:56] 2025-10-12 12:38:25,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:38:56] 2025-10-12 12:38:25,777 | INFO     | all payload control threads have been joined
[2025-10-12 08:38:56] 2025-10-12 12:38:25,911 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 08:38:56] 2025-10-12 12:38:25,912 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 08:38:56] 2025-10-12 12:38:25,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:38:56] 2025-10-12 12:38:25,912 | INFO     | will abort loop
[2025-10-12 08:38:56] 2025-10-12 12:38:26,442 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:26,669 | INFO     | all job control threads have been joined
[2025-10-12 08:38:56] 2025-10-12 12:38:26,694 | INFO     | [data] control thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:26,743 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:26,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:38:56] 2025-10-12 12:38:26,783 | INFO     | [payload] control thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:26,844 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:26,917 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:26,927 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,007 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,239 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:38:56] 2025-10-12 12:38:27,428 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,506 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,674 | INFO     | [job] control thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:38:56] 2025-10-12 12:38:27,704 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,911 | INFO     | [job] validate thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:27,912 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:28,702 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:30,788 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:38:56] 2025-10-12 12:38:32,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370216630080)>', '<ExcThread(monitor, started 140369943566080)>']
[2025-10-12 08:38:56] 2025-10-12 12:38:37,114 | INFO     | all workflow threads have been joined
[2025-10-12 08:38:56] 2025-10-12 12:38:37,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:38:56] 2025-10-12 12:38:37,115 | INFO     | traces error code: 0
[2025-10-12 08:38:56] 2025-10-12 12:38:37,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:38:56] 2025-10-12 12:38:55,604 | INFO     | PID=2774111 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:38:56] 2025-10-12 12:38:55,607 | INFO     | .. there are 21 such processes running
[2025-10-12 08:38:56] 2025-10-12 12:38:55,607 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:38:56] 2025-10-12 12:38:55,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:38:56] 2025-10-12 12:38:55,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:38:56] 2025-10-12 12:38:55,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:38:56] 2025-10-12 12:38:55,607 | INFO     | [monitor] control thread has ended
[2025-10-12 08:38:56] 2025-10-12 12:38:55,755 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:38:56] 2025-10-12 12:38:55,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:38:56] 2025-10-12 12:38:55,797 [wrapper] pilotpid: 2774111
[2025-10-12 08:38:56] 2025-10-12 12:38:55,831 [wrapper] Pilot exit status: 0
[2025-10-12 08:38:56] 2025-10-12 12:38:55,929 [wrapper] pandaids: 6839592056
[2025-10-12 08:38:56] 2025-10-12 12:38:56,080 [wrapper] cleanup supervisor_pilot 2978592 2774112
[2025-10-12 08:38:56] 2025-10-12 12:38:56,098 [wrapper] Test setup, not cleaning
[2025-10-12 08:38:56] 2025-10-12 12:38:56,106 [wrapper] apfmon messages muted
[2025-10-12 08:38:56] 2025-10-12 12:38:56,124 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:38:56] 2025-10-12 12:38:56,127 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:38:56]  *** Error codes and diagnostics ***
[2025-10-12 08:38:56]     "exeErrorCode": 0,
[2025-10-12 08:38:56]     "exeErrorDiag": "",
[2025-10-12 08:38:56]     "pilotErrorCode": 0,
[2025-10-12 08:38:56]     "pilotErrorDiag": "",
[2025-10-12 08:38:56]  *** Listing of results directory ***
[2025-10-12 08:38:56] total 412252
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:44 pilot3.tar.gz
[2025-10-12 08:38:56] -rwx------. 1 boincer umatlas     36292 Oct 12 02:49 runpilot2-wrapper.sh
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:49 queuedata.json
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:38:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:47 run_atlas
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:47 job.xml
[2025-10-12 08:38:56] -rw-r--r--. 2 boincer umatlas 223373967 Oct 12 07:47 EVNT.46676267._002392.pool.root.1
[2025-10-12 08:38:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:47 start_atlas.sh
[2025-10-12 08:38:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:47 shared
[2025-10-12 08:38:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 07:47 input.tar.gz
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:47 boinc_lockfile
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:47 pandaJob.out
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas    975520 Oct 12 07:48 agis_schedconf.cvmfs.json
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:38:56] drwx------. 5 boincer umatlas      4096 Oct 12 07:48 pilot3
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 08:37 init_data.xml
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas 193268629 Oct 12 08:37 HITS.46676269._073158.pool.root.1
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas       529 Oct 12 08:37 boinc_task_state.xml
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas      1047 Oct 12 08:38 memory_monitor_summary.json
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas    353038 Oct 12 08:38 log.46676269._073158.job.log.tgz.1
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas        95 Oct 12 08:38 pilot_heartbeat.json
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas      7803 Oct 12 08:38 heartbeat.json
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:38 boinc_mmap_file
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas        27 Oct 12 08:38 wrapper_checkpoint.txt
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas       823 Oct 12 08:38 pilotlog.txt
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas    448901 Oct 12 08:38 log.46676269._073158.job.log.1
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas       357 Oct 12 08:38 output.list
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:38 runtime_log
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas    819200 Oct 12 08:38 result.tar.gz
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 08:38 runtime_log.err
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas       657 Oct 12 08:38 mz1KDms44R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxwiNDmFJSwdn.diag
[2025-10-12 08:38:56] -rw-r--r--. 1 boincer umatlas     22306 Oct 12 08:38 stderr.txt
[2025-10-12 08:38:56] HITS file was successfully produced:
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas 193268629 Oct 12 08:37 shared/HITS.pool.root.1
[2025-10-12 08:38:56]  *** Contents of shared directory: ***
[2025-10-12 08:38:56] total 408264
[2025-10-12 08:38:56] -rw-r--r--. 2 boincer umatlas 223373967 Oct 12 07:47 ATLAS.root_0
[2025-10-12 08:38:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:47 start_atlas.sh
[2025-10-12 08:38:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 07:47 input.tar.gz
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas 193268629 Oct 12 08:37 HITS.pool.root.1
[2025-10-12 08:38:56] -rw-------. 1 boincer umatlas    819200 Oct 12 08:38 result.tar.gz
08:38:58 (2770142): run_atlas exited; CPU time 23679.055078
08:38:58 (2770142): called boinc_finish(0)

</stderr_txt>
]]>

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