Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:19:13 (3801740): wrapper (7.7.26015): starting
12:19:13 (3801740): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:19:13] Arguments: --nthreads 12
[2025-10-12 12:19:13] Threads: 12
[2025-10-12 12:19:13] Checking for CVMFS
[2025-10-12 12:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:19:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:19:14] 2.11.0.0 3299214 3053 84900 151620 3 188 5379284 6144000 14204 130560 0 59855786 100.000 110206 195 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 12:19:14] CVMFS is ok
[2025-10-12 12:19:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:19:14] Checking for apptainer binary...
[2025-10-12 12:19:14] apptainer is not installed, using version from CVMFS
[2025-10-12 12:19:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:19:14] radiat0r
[2025-10-12 12:19:14] apptainer works
[2025-10-12 12:19:14] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:19:14] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:19:14] Starting ATLAS job with PandaID=6839386612
[2025-10-12 12:19:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:12:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:12:38]  surl=/var/lib/boinc/slots/23/PanDA_Pilot-6839386612/log.46676269._070908.job.log.tgz.1
[2025-10-12 13:12:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/f5/log.46676269._070908.job.log.tgz.1
[2025-10-12 13:12:38]  workdir=None
[2025-10-12 13:12:38] ]
[2025-10-12 13:12:38] 2025-10-12 13:11:20,578 | INFO     | transferring file log.46676269._070908.job.log.tgz.1 from /var/lib/boinc/slots/23/PanDA_Pilot-6839386612/log.46676269._070908.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 13:12:38] 2025-10-12 13:11:20,578 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/23/PanDA_Pilot-6839386612/log.46676269._070908.job.log.tgz.1 /var/lib/boinc/slots/23/log.46676269._070908.j
[2025-10-12 13:12:38] 2025-10-12 13:11:20,606 | INFO     | adding to output.list: log.46676269._070908.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/f5/log.46676269._070908.job.log.tg
[2025-10-12 13:12:38] 2025-10-12 13:11:20,607 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 13:12:38] 2025-10-12 13:11:20,607 | INFO     | summary of transferred files:
[2025-10-12 13:12:38] 2025-10-12 13:11:20,607 | INFO     |  -- lfn=log.46676269._070908.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 13:12:38] 2025-10-12 13:11:20,607 | INFO     | stage-out finished correctly
[2025-10-12 13:12:38] 2025-10-12 13:11:21,729 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 13:12:38] 2025-10-12 13:11:22,330 | INFO     | time since job start (3114s) is within the limit (172800.0s)
[2025-10-12 13:12:38] 2025-10-12 13:11:22,435 | WARNING  | process 3817254 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 13:12:38] 2025-10-12 13:11:22,436 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6839386612/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:12:38] 2025-10-12 13:11:22,576 | INFO     | job 6839386612 has state=finished
[2025-10-12 13:12:38] 2025-10-12 13:11:22,576 | INFO     | preparing for final server update for job 6839386612 in state='finished'
[2025-10-12 13:12:38] 2025-10-12 13:11:22,577 | INFO     | this job has now completed (state=finished)
[2025-10-12 13:12:38] 2025-10-12 13:11:22,577 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 13:12:38] 2025-10-12 13:11:22,577 | INFO     | log transfer has been attempted: DONE
[2025-10-12 13:12:38] 2025-10-12 13:11:22,578 | INFO     | job 6839386612 has finished - writing final server update
[2025-10-12 13:12:38] 2025-10-12 13:11:22,578 | INFO     | total number of processed events: 400 (read)
[2025-10-12 13:12:38] 2025-10-12 13:11:22,579 | INFO     | executing command: lscpu
[2025-10-12 13:12:38] 2025-10-12 13:11:22,771 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 13:12:38] 2025-10-12 13:11:23,293 | INFO     | number of running child processes to parent process 3817254: 1
[2025-10-12 13:12:38] 2025-10-12 13:11:23,293 | INFO     | maximum number of monitored processes: 6
[2025-10-12 13:12:38] 2025-10-12 13:11:24,335 | INFO     | time since job start (3116s) is within the limit (172800.0s)
[2025-10-12 13:12:38] 2025-10-12 13:11:25,797 | INFO     | monitor loop #217: job 0:6839386612 is in state 'finished'
[2025-10-12 13:12:38] 2025-10-12 13:11:25,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:12:38] 2025-10-12 13:11:26,338 | INFO     | time since job start (3118s) is within the limit (172800.0s)
[2025-10-12 13:12:38] 2025-10-12 13:11:28,300 | INFO     | monitor loop #218: job 0:6839386612 is in state 'finished'
[2025-10-12 13:12:38] 2025-10-12 13:11:28,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:12:38] 2025-10-12 13:11:28,343 | INFO     | time since job start (3120s) is within the limit (172800.0s)
[2025-10-12 13:12:38] 2025-10-12 13:11:29,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:12:38] 2025-10-12 13:11:29,653 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2314.871812500001
[2025-10-12 13:12:38] 2025-10-12 13:11:29,739 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6839386612/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:12:38] 2025-10-12 13:11:29,740 | INFO     | extracted standard info from prmon json
[2025-10-12 13:12:38] 2025-10-12 13:11:29,740 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:12:38] 2025-10-12 13:11:29,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:12:38] 2025-10-12 13:11:29,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:12:38] 2025-10-12 13:11:29,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:12:38] 2025-10-12 13:11:29,743 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:12:38] 2025-10-12 13:11:29,743 | INFO     | sum of square deviations: 26400495.0
[2025-10-12 13:12:38] 2025-10-12 13:11:29,743 | INFO     | sum of deviations: 124980704.0
[2025-10-12 13:12:38] 2025-10-12 13:11:29,743 | INFO     | mean x: 1760273219.5
[2025-10-12 13:12:38] 2025-10-12 13:11:29,743 | INFO     | mean y: 2692241.227272727
[2025-10-12 13:12:38] 2025-10-12 13:11:29,743 | INFO     | -- intersect: -8330491898.140437
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | intersect: -8330491898.140437
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | chi2: 0.0005953314504266218
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | -- intersect: -8330491898.140437
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | current memory leak: 4.73 B/s (using 44 data points, chi2=0.00)
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | could have reported an average CPU frequency of 2358 MHz (5 samples)
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | ..............................
[2025-10-12 13:12:38] 2025-10-12 13:11:29,744 | INFO     | . Timing measurements:
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . get job = 0 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . initial setup = 1 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . payload setup = 8 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . stage-in = 0 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . payload execution = 3080 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . stage-out = 0 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | . log creation = 0 s
[2025-10-12 13:12:38] 2025-10-12 13:11:29,745 | INFO     | ..............................
[2025-10-12 13:12:38] 2025-10-12 13:11:30,334 | INFO     | 
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | job summary report
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | --------------------------------------------------
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | PanDA job id: 6839386612
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | task id: 46676269
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | errors: (none)
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | pilot state: finished 
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | transexitcode: 0
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | exeerrorcode: 0
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | exeerrordiag: 
[2025-10-12 13:12:38] 2025-10-12 13:11:30,335 | INFO     | exitcode: 0
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | exitmsg: OK
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | cpuconsumptiontime: 32589 s
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | nevents: 400
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | neventsw: 0
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | pid: 3817254
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | pgrp: 3817254
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | corecount: 12
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | event service: False
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | sizes: {0: 2348858, 7: 2349120, 11: 2349148, 3093: 2374695, 3094: 2383695, 3095: 2383751, 3103: 2384105}
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | --------------------------------------------------
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | 
[2025-10-12 13:12:38] 2025-10-12 13:11:30,336 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-10-12 13:12:38] 2025-10-12 13:11:30,347 | INFO     | time since job start (3122s) is within the limit (172800.0s)
[2025-10-12 13:12:38] 2025-10-12 13:11:30,365 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,366 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | job 6839386612 has completed (purged errors)
[2025-10-12 13:12:38] 2025-10-12 13:11:30,367 | INFO     | overall cleanup function is called
[2025-10-12 13:12:38] 2025-10-12 13:11:31,374 | INFO     | --- collectZombieJob: --- 10, [3817254]
[2025-10-12 13:12:38] 2025-10-12 13:11:31,375 | INFO     | zombie collector waiting for pid 3817254
[2025-10-12 13:12:38] 2025-10-12 13:11:31,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:12:38] 2025-10-12 13:11:31,375 | INFO     | collected zombie processes
[2025-10-12 13:12:38] 2025-10-12 13:11:31,375 | INFO     | will attempt to kill all subprocesses of pid=3817254
[2025-10-12 13:12:38] 2025-10-12 13:11:32,180 | INFO     | process IDs to be killed: [3817254] (in reverse order)
[2025-10-12 13:12:38] 2025-10-12 13:11:32,456 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:12:38] 2025-10-12 13:11:32,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:12:38] 2025-10-12 13:11:32,484 | INFO     | did not find any defunct processes belonging to 3817254
[2025-10-12 13:12:38] 2025-10-12 13:11:32,508 | INFO     | did not find any defunct processes belonging to 3817254
[2025-10-12 13:12:38] 2025-10-12 13:11:32,509 | INFO     | ready for new job
[2025-10-12 13:12:38] 2025-10-12 13:11:32,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:12:38] 2025-10-12 13:11:32,510 | INFO     | ***************************************
[2025-10-12 13:12:38] 2025-10-12 13:11:32,511 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:12:38] 2025-10-12 13:11:32,511 | INFO     | ***************************************
[2025-10-12 13:12:38] 2025-10-12 13:11:32,511 | INFO     | 
[2025-10-12 13:12:38] 2025-10-12 13:11:32,549 | INFO     | architecture information:
[2025-10-12 13:12:38] 2025-10-12 13:11:32,550 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:12:38] 2025-10-12 13:11:32,573 | INFO     | cat /etc/os-release:
[2025-10-12 13:12:38] NAME="CentOS Linux"
[2025-10-12 13:12:38] VERSION="7 (Core)"
[2025-10-12 13:12:38] ID="centos"
[2025-10-12 13:12:38] ID_LIKE="rhel fedora"
[2025-10-12 13:12:38] VERSION_ID="7"
[2025-10-12 13:12:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:12:38] ANSI_COLOR="0;31"
[2025-10-12 13:12:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:12:38] HOME_URL="https://www.centos.org/"
[2025-10-12 13:12:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:12:38] 
[2025-10-12 13:12:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:12:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:12:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:12:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:12:38] 
[2025-10-12 13:12:38] 2025-10-12 13:11:32,573 | INFO     | ***************************************
[2025-10-12 13:12:38] 2025-10-12 13:11:33,075 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-10-12 13:12:38] 2025-10-12 13:11:33,102 | INFO     | sufficient remaining disk space (1724489138176 B)
[2025-10-12 13:12:38] 2025-10-12 13:11:33,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:12:38] 2025-10-12 13:11:33,103 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:12:38] 2025-10-12 13:11:33,103 | INFO     | update_server=False
[2025-10-12 13:12:38] 2025-10-12 13:11:33,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:12:38] 2025-10-12 13:11:33,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:12:38] 2025-10-12 13:11:33,226 | INFO     | all payload control threads have been joined
[2025-10-12 13:12:38] 2025-10-12 13:11:33,309 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:12:38] 2025-10-12 13:11:33,310 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:12:38] 2025-10-12 13:11:33,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:12:38] 2025-10-12 13:11:33,310 | INFO     | will abort loop
[2025-10-12 13:12:38] 2025-10-12 13:11:33,562 | INFO     | all job control threads have been joined
[2025-10-12 13:12:38] 2025-10-12 13:11:33,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:12:38] 2025-10-12 13:11:34,014 | INFO     | all data control threads have been joined
[2025-10-12 13:12:38] 2025-10-12 13:11:34,106 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,232 | INFO     | [payload] control thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,314 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,419 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,430 | INFO     | [job] validate thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,568 | INFO     | [job] control thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,574 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,728 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:12:38] 2025-10-12 13:11:34,900 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:34,942 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:35,018 | INFO     | [data] control thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:35,434 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:35,732 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:35,856 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:11:37,106 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:12:38] 2025-10-12 13:12:04,441 | INFO     | PID=3806511 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 13:12:38] 2025-10-12 13:12:04,441 | INFO     | .. there are 16 such processes running
[2025-10-12 13:12:38] 2025-10-12 13:12:04,441 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:12:38] 2025-10-12 13:12:04,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:12:38] 2025-10-12 13:12:04,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:12:38] 2025-10-12 13:12:32,526 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:12:38] 2025-10-12 13:12:33,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832040793920)>', '<ExcThread(monitor, started 139831745160960)>']
[2025-10-12 13:12:38] 2025-10-12 13:12:33,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:12:38] 2025-10-12 13:12:33,567 | INFO     | [monitor] control thread has ended
[2025-10-12 13:12:38] 2025-10-12 13:12:38,298 | INFO     | all workflow threads have been joined
[2025-10-12 13:12:38] 2025-10-12 13:12:38,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:12:38] 2025-10-12 13:12:38,299 | INFO     | traces error code: 0
[2025-10-12 13:12:38] 2025-10-12 13:12:38,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:12:38] 2025-10-12 13:12:38,456 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:12:38] 2025-10-12 13:12:38,460 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:12:38] 2025-10-12 13:12:38,463 [wrapper] pilotpid: 3806511
[2025-10-12 13:12:38] 2025-10-12 13:12:38,467 [wrapper] Pilot exit status: 0
[2025-10-12 13:12:38] 2025-10-12 13:12:38,481 [wrapper] pandaids: 6839386612
[2025-10-12 13:12:38] 2025-10-12 13:12:38,659 [wrapper] cleanup supervisor_pilot   27910 3806512
[2025-10-12 13:12:38] 2025-10-12 13:12:38,663 [wrapper] Test setup, not cleaning
[2025-10-12 13:12:38] 2025-10-12 13:12:38,667 [wrapper] apfmon messages muted
[2025-10-12 13:12:38] 2025-10-12 13:12:38,670 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:12:38] 2025-10-12 13:12:38,674 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:12:38]  *** Error codes and diagnostics ***
[2025-10-12 13:12:38]     "exeErrorCode": 0,
[2025-10-12 13:12:38]     "exeErrorDiag": "",
[2025-10-12 13:12:38]     "pilotErrorCode": 0,
[2025-10-12 13:12:38]     "pilotErrorDiag": "",
[2025-10-12 13:12:38]  *** Listing of results directory ***
[2025-10-12 13:12:38] total 410932
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:11 pilot3.tar.gz
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc      5112 Oct 12 04:14 queuedata.json
[2025-10-12 13:12:38] -rwx------ 1 boinc boinc     36292 Oct 12 04:15 runpilot2-wrapper.sh
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:12:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:19 run_atlas
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 12:19 job.xml
[2025-10-12 13:12:38] -rw-r--r-- 2 boinc boinc 221352683 Oct 12 12:19 EVNT.46676267._003264.pool.root.1
[2025-10-12 13:12:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:19 start_atlas.sh
[2025-10-12 13:12:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:19 shared
[2025-10-12 13:12:38] -rw-r--r-- 2 boinc boinc    569682 Oct 12 12:19 input.tar.gz
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc      9396 Oct 12 12:19 init_data.xml
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:19 boinc_setup_complete
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 12:19 boinc_lockfile
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 12:19 pandaJob.out
[2025-10-12 13:12:38] -rw------- 1 boinc boinc    975512 Oct 12 12:19 agis_schedconf.cvmfs.json
[2025-10-12 13:12:38] -rw------- 1 boinc boinc   1560580 Oct 12 12:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:12:38] drwx------ 5 boinc boinc      4096 Oct 12 12:19 pilot3
[2025-10-12 13:12:38] -rw------- 1 boinc boinc 193884392 Oct 12 13:10 HITS.46676269._070908.pool.root.1
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:10 boinc_task_state.xml
[2025-10-12 13:12:38] -rw------- 1 boinc boinc        95 Oct 12 13:11 pilot_heartbeat.json
[2025-10-12 13:12:38] -rw------- 1 boinc boinc      1028 Oct 12 13:11 memory_monitor_summary.json
[2025-10-12 13:12:38] -rw------- 1 boinc boinc    356420 Oct 12 13:11 log.46676269._070908.job.log.tgz.1
[2025-10-12 13:12:38] -rw------- 1 boinc boinc      7742 Oct 12 13:11 heartbeat.json
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:12 boinc_mmap_file
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:12 wrapper_checkpoint.txt
[2025-10-12 13:12:38] -rw------- 1 boinc boinc      5014 Oct 12 13:12 pilotlog.txt
[2025-10-12 13:12:38] -rw------- 1 boinc boinc    463219 Oct 12 13:12 log.46676269._070908.job.log.1
[2025-10-12 13:12:38] -rw------- 1 boinc boinc       357 Oct 12 13:12 output.list
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:12 runtime_log
[2025-10-12 13:12:38] -rw------- 1 boinc boinc    839680 Oct 12 13:12 result.tar.gz
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc      8672 Oct 12 13:12 runtime_log.err
[2025-10-12 13:12:38] -rw------- 1 boinc boinc       642 Oct 12 13:12 PC2MDmIf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxBTMDmLsgWqm.diag
[2025-10-12 13:12:38] -rw-r--r-- 1 boinc boinc     21986 Oct 12 13:12 stderr.txt
[2025-10-12 13:12:38] HITS file was successfully produced:
[2025-10-12 13:12:38] -rw------- 1 boinc boinc 193884392 Oct 12 13:10 shared/HITS.pool.root.1
[2025-10-12 13:12:38]  *** Contents of shared directory: ***
[2025-10-12 13:12:38] total 406916
[2025-10-12 13:12:38] -rw-r--r-- 2 boinc boinc 221352683 Oct 12 12:19 ATLAS.root_0
[2025-10-12 13:12:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:19 start_atlas.sh
[2025-10-12 13:12:38] -rw-r--r-- 2 boinc boinc    569682 Oct 12 12:19 input.tar.gz
[2025-10-12 13:12:38] -rw------- 1 boinc boinc 193884392 Oct 12 13:10 HITS.pool.root.1
[2025-10-12 13:12:38] -rw------- 1 boinc boinc    839680 Oct 12 13:12 result.tar.gz
13:12:39 (3801740): run_atlas exited; CPU time 32777.456392
13:12:39 (3801740): called boinc_finish(0)

</stderr_txt>
]]>

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