Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:26 (20971): wrapper (7.7.26015): starting
18:00:26 (20971): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:00:26] Arguments: --nthreads 8
[2025-10-12 18:00:26] Threads: 8
[2025-10-12 18:00:26] Checking for CVMFS
[2025-10-12 18:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:00:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:00:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:00:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:00:30] 2.11.2.0 18802 220732 140632 151625 3 61 20969501 25165825 4632 130560 0 120591915 99.894 62655684 2973 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 18:00:30] CVMFS is ok
[2025-10-12 18:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:00:30] Checking for apptainer binary...
[2025-10-12 18:00:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:00:30] Running /usr/bin/apptainer --version
[2025-10-12 18:00:30] apptainer version 1.3.2-1.el7
[2025-10-12 18:00:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:00:36] cg-vwn230.simple-grid.lan
[2025-10-12 18:00:36] apptainer works
[2025-10-12 18:00:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:00:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:00:36] Starting ATLAS job with PandaID=6839592026
[2025-10-12 18:00:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:05:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:05:27] 2025-10-12 20:04:35,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:05:27] 2025-10-12 20:04:35,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:05:27] 2025-10-12 20:04:35,285 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:05:27] 2025-10-12 20:04:35,285 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,287 | INFO     | sum of deviations: 81423748702.5
[2025-10-12 22:05:27] 2025-10-12 20:04:35,287 | INFO     | mean x: 1760292418.5
[2025-10-12 22:05:27] 2025-10-12 20:04:35,288 | INFO     | mean y: 2423058.4780701753
[2025-10-12 22:05:27] 2025-10-12 20:04:35,288 | INFO     | -- intersect: -38997280072.74303
[2025-10-12 22:05:27] 2025-10-12 20:04:35,288 | INFO     | intersect: -38997280072.74303
[2025-10-12 22:05:27] 2025-10-12 20:04:35,288 | INFO     | chi2: 6.090327360591705
[2025-10-12 22:05:27] 2025-10-12 20:04:35,289 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,290 | INFO     | sum of deviations: 94346386574.99997
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | mean x: 1760292266.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | mean y: 2431217.9641255606
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | -- intersect: -48295193495.78874
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | intersect: -48295193495.78874
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | chi2: 5.3699307543215165
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | current chi2=5.3699307543215165 (change=11.828536688054132 %)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,291 | INFO     | right removable region: 222
[2025-10-12 22:05:27] 2025-10-12 20:04:35,292 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,294 | INFO     | sum of deviations: 5991950578.000002
[2025-10-12 22:05:27] 2025-10-12 20:04:35,294 | INFO     | mean x: 1760292571.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,294 | INFO     | mean y: 2471644.452914798
[2025-10-12 22:05:27] 2025-10-12 20:04:35,294 | INFO     | -- intersect: -3064916953.756929
[2025-10-12 22:05:27] 2025-10-12 20:04:35,294 | INFO     | intersect: -3064916953.756929
[2025-10-12 22:05:27] 2025-10-12 20:04:35,294 | INFO     | chi2: 1.6923541793395576
[2025-10-12 22:05:27] 2025-10-12 20:04:35,295 | INFO     | current chi2=1.6923541793395576 (change=72.2124267031988 %)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,295 | INFO     | sum of square deviations: 3212467674.5
[2025-10-12 22:05:27] 2025-10-12 20:04:35,297 | INFO     | sum of deviations: -21621540279.99999
[2025-10-12 22:05:27] 2025-10-12 20:04:35,297 | INFO     | mean x: 1760292723.5
[2025-10-12 22:05:27] 2025-10-12 20:04:35,297 | INFO     | mean y: 2490112.1926605506
[2025-10-12 22:05:27] 2025-10-12 20:04:35,297 | INFO     | -- intersect: 11850154861.588144
[2025-10-12 22:05:27] 2025-10-12 20:04:35,297 | INFO     | intersect: 11850154861.588144
[2025-10-12 22:05:27] 2025-10-12 20:04:35,297 | INFO     | chi2: 0.8762219126559784
[2025-10-12 22:05:27] 2025-10-12 20:04:35,298 | INFO     | current chi2=0.8762219126559784 (change=48.22467286381361 %)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,298 | INFO     | sum of square deviations: 2996454322.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,300 | INFO     | sum of deviations: -16407956167.999996
[2025-10-12 22:05:27] 2025-10-12 20:04:35,300 | INFO     | mean x: 1760292876.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,300 | INFO     | mean y: 2486403.488262911
[2025-10-12 22:05:27] 2025-10-12 20:04:35,300 | INFO     | -- intersect: 9641481445.125559
[2025-10-12 22:05:27] 2025-10-12 20:04:35,300 | INFO     | intersect: 9641481445.125559
[2025-10-12 22:05:27] 2025-10-12 20:04:35,300 | INFO     | chi2: 0.8514989301099666
[2025-10-12 22:05:27] 2025-10-12 20:04:35,301 | INFO     | current chi2=0.8514989301099666 (change=2.8215435141392677 %)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,301 | INFO     | left removable region: 30
[2025-10-12 22:05:27] 2025-10-12 20:04:35,301 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,302 | INFO     | sum of deviations: 4751324282.000001
[2025-10-12 22:05:27] 2025-10-12 20:04:35,303 | INFO     | mean x: 1760293150.5
[2025-10-12 22:05:27] 2025-10-12 20:04:35,303 | INFO     | mean y: 2491233.8229166665
[2025-10-12 22:05:27] 2025-10-12 20:04:35,303 | INFO     | -- intersect: -3808424471.1488047
[2025-10-12 22:05:27] 2025-10-12 20:04:35,303 | INFO     | intersect: -3808424471.1488047
[2025-10-12 22:05:27] 2025-10-12 20:04:35,303 | INFO     | chi2: 0.0008638687828015343
[2025-10-12 22:05:27] 2025-10-12 20:04:35,304 | INFO     | -- intersect: -3808424471.1488047
[2025-10-12 22:05:27] 2025-10-12 20:04:35,304 | INFO     | current memory leak: 2.16 B/s (using 192 data points, chi2=0.00)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,304 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | ..............................
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . Timing measurements:
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . get job = 0 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . initial setup = 6 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . payload setup = 129 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . stage-in = 0 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . payload execution = 14023 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . stage-out = 3 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | . log creation = 1 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,305 | INFO     | ..............................
[2025-10-12 22:05:27] 2025-10-12 20:04:35,424 | INFO     | 
[2025-10-12 22:05:27] 2025-10-12 20:04:35,424 | INFO     | job summary report
[2025-10-12 22:05:27] 2025-10-12 20:04:35,424 | INFO     | --------------------------------------------------
[2025-10-12 22:05:27] 2025-10-12 20:04:35,425 | INFO     | PanDA job id: 6839592026
[2025-10-12 22:05:27] 2025-10-12 20:04:35,425 | INFO     | task id: 46676269
[2025-10-12 22:05:27] 2025-10-12 20:04:35,425 | INFO     | errors: (none)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,425 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:05:27] 2025-10-12 20:04:35,425 | INFO     | pilot state: finished 
[2025-10-12 22:05:27] 2025-10-12 20:04:35,425 | INFO     | transexitcode: 0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,426 | INFO     | exeerrorcode: 0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,426 | INFO     | exeerrordiag: 
[2025-10-12 22:05:27] 2025-10-12 20:04:35,426 | INFO     | exitcode: 0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | exitmsg: OK
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | cpuconsumptiontime: 52969 s
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | nevents: 400
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | neventsw: 0
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | pid: 31309
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | pgrp: 31309
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | corecount: 8
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | event service: False
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 45: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 88: 2349265, 90: 2349835, 98
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | --------------------------------------------------
[2025-10-12 22:05:27] 2025-10-12 20:04:35,427 | INFO     | 
[2025-10-12 22:05:27] 2025-10-12 20:04:35,428 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 22:05:27] 2025-10-12 20:04:35,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | job 6839592026 has completed (purged errors)
[2025-10-12 22:05:27] 2025-10-12 20:04:35,514 | INFO     | overall cleanup function is called
[2025-10-12 22:05:27] 2025-10-12 20:04:36,523 | INFO     | --- collectZombieJob: --- 10, [31309]
[2025-10-12 22:05:27] 2025-10-12 20:04:36,524 | INFO     | zombie collector waiting for pid 31309
[2025-10-12 22:05:27] 2025-10-12 20:04:36,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:05:27] 2025-10-12 20:04:36,524 | INFO     | collected zombie processes
[2025-10-12 22:05:27] 2025-10-12 20:04:36,524 | INFO     | will attempt to kill all subprocesses of pid=31309
[2025-10-12 22:05:27] 2025-10-12 20:04:36,640 | INFO     | process IDs to be killed: [31309] (in reverse order)
[2025-10-12 22:05:27] 2025-10-12 20:04:37,296 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:05:27] 2025-10-12 20:04:37,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:05:27] 2025-10-12 20:04:37,300 | INFO     | did not find any defunct processes belonging to 31309
[2025-10-12 22:05:27] 2025-10-12 20:04:37,303 | INFO     | did not find any defunct processes belonging to 31309
[2025-10-12 22:05:27] 2025-10-12 20:04:37,303 | INFO     | ready for new job
[2025-10-12 22:05:27] 2025-10-12 20:04:37,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:05:27] 2025-10-12 20:04:37,305 | INFO     | ***************************************
[2025-10-12 22:05:27] 2025-10-12 20:04:37,306 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:05:27] 2025-10-12 20:04:37,306 | INFO     | ***************************************
[2025-10-12 22:05:27] 2025-10-12 20:04:37,306 | INFO     | 
[2025-10-12 22:05:27] 2025-10-12 20:04:37,306 | INFO     | pilot is running in a VM
[2025-10-12 22:05:27] 2025-10-12 20:04:37,307 | INFO     | architecture information:
[2025-10-12 22:05:27] 2025-10-12 20:04:37,307 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:05:27] 2025-10-12 20:04:37,617 | INFO     | cat /etc/os-release:
[2025-10-12 22:05:27] NAME="CentOS Linux"
[2025-10-12 22:05:27] VERSION="7 (Core)"
[2025-10-12 22:05:27] ID="centos"
[2025-10-12 22:05:27] ID_LIKE="rhel fedora"
[2025-10-12 22:05:27] VERSION_ID="7"
[2025-10-12 22:05:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:05:27] ANSI_COLOR="0;31"
[2025-10-12 22:05:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:05:27] HOME_URL="https://www.centos.org/"
[2025-10-12 22:05:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:05:27] 
[2025-10-12 22:05:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:05:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:05:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:05:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:05:27] 
[2025-10-12 22:05:27] 2025-10-12 20:04:37,617 | INFO     | ***************************************
[2025-10-12 22:05:27] 2025-10-12 20:04:38,121 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 22:05:27] 2025-10-12 20:04:38,418 | INFO     | sufficient remaining disk space (495774072832 B)
[2025-10-12 22:05:27] 2025-10-12 20:04:38,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:05:27] 2025-10-12 20:04:38,419 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:05:27] 2025-10-12 20:04:38,419 | INFO     | update_server=False
[2025-10-12 22:05:27] 2025-10-12 20:04:38,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:05:27] 2025-10-12 20:04:38,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:05:27] 2025-10-12 20:04:38,420 | INFO     | aborting loop
[2025-10-12 22:05:27] 2025-10-12 20:04:38,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:05:27] 2025-10-12 20:04:38,716 | INFO     | all job control threads have been joined
[2025-10-12 22:05:27] 2025-10-12 20:04:38,932 | INFO     | all data control threads have been joined
[2025-10-12 22:05:27] 2025-10-12 20:04:38,933 | INFO     | all payload control threads have been joined
[2025-10-12 22:05:27] 2025-10-12 20:04:39,424 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:39,425 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:39,686 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:39,722 | INFO     | [job] control thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:39,938 | INFO     | [payload] control thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:39,939 | INFO     | [data] control thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:39,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,044 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,286 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,429 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:05:27] 2025-10-12 20:04:40,650 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,684 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,762 | INFO     | [job] validate thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:40,923 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:41,444 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:04:41,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:05:27] 2025-10-12 20:04:45,833 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:05:27] 2025-10-12 20:05:07,318 | INFO     | PID=24758 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:05:27] 2025-10-12 20:05:07,318 | INFO     | .. there are 9 such processes running
[2025-10-12 22:05:27] 2025-10-12 20:05:07,318 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:05:27] 2025-10-12 20:05:07,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:05:27] 2025-10-12 20:05:07,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:05:27] 2025-10-12 20:05:16,266 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:05:27] 2025-10-12 20:05:17,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740144715584)>', '<ExcThread(monitor, started 139739571152640)>']
[2025-10-12 22:05:27] 2025-10-12 20:05:18,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:05:27] 2025-10-12 20:05:18,384 | INFO     | [monitor] control thread has ended
[2025-10-12 22:05:27] 2025-10-12 20:05:22,460 | INFO     | all workflow threads have been joined
[2025-10-12 22:05:27] 2025-10-12 20:05:22,461 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:05:27] 2025-10-12 20:05:22,461 | INFO     | traces error code: 0
[2025-10-12 22:05:27] 2025-10-12 20:05:22,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:05:27] 2025-10-12 20:05:22,847 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:05:27] 2025-10-12 20:05:22,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:05:27] 2025-10-12 20:05:22,986 [wrapper] pilotpid: 24758
[2025-10-12 22:05:27] 2025-10-12 20:05:23,053 [wrapper] Pilot exit status: 0
[2025-10-12 22:05:27] 2025-10-12 20:05:23,566 [wrapper] pandaids: 6839592026
[2025-10-12 22:05:27] 2025-10-12 20:05:24,490 [wrapper] cleanup supervisor_pilot 26813 24759
[2025-10-12 22:05:27] 2025-10-12 20:05:24,604 [wrapper] Test setup, not cleaning
[2025-10-12 22:05:27] 2025-10-12 20:05:24,712 [wrapper] apfmon messages muted
[2025-10-12 22:05:27] 2025-10-12 20:05:24,805 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:05:27] 2025-10-12 20:05:24,900 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:05:27]  *** Error codes and diagnostics ***
[2025-10-12 22:05:27]     "exeErrorCode": 0,
[2025-10-12 22:05:27]     "exeErrorDiag": "",
[2025-10-12 22:05:27]     "pilotErrorCode": 0,
[2025-10-12 22:05:27]     "pilotErrorDiag": "",
[2025-10-12 22:05:27]  *** Listing of results directory ***
[2025-10-12 22:05:27] total 405512
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:44 pilot3.tar.gz
[2025-10-12 22:05:27] -rwx------. 1 boinc boinc     36292 Oct 12 08:51 runpilot2-wrapper.sh
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:51 queuedata.json
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc       100 Oct 12 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:05:27] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 18:00 run_atlas
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc       105 Oct 12 18:00 job.xml
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc      6391 Oct 12 18:00 init_data.xml
[2025-10-12 22:05:27] -rw-r--r--. 2 boinc boinc 222309372 Oct 12 18:00 EVNT.46676267._004529.pool.root.1
[2025-10-12 22:05:27] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:00 start_atlas.sh
[2025-10-12 22:05:27] drwxrwx--x. 2 boinc boinc        68 Oct 12 18:00 shared
[2025-10-12 22:05:27] -rw-r--r--. 2 boinc boinc    569673 Oct 12 18:00 input.tar.gz
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc         0 Oct 12 18:00 boinc_lockfile
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc      2550 Oct 12 18:00 pandaJob.out
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc    975528 Oct 12 18:03 agis_schedconf.cvmfs.json
[2025-10-12 22:05:27] drwx------. 5 boinc boinc      4096 Oct 12 18:03 pilot3
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc 184251302 Oct 12 22:01 HITS.46676269._073128.pool.root.1
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc       530 Oct 12 22:01 boinc_task_state.xml
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc      1027 Oct 12 22:02 memory_monitor_summary.json
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc   1560580 Oct 12 22:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc    456558 Oct 12 22:02 log.46676269._073128.job.log.tgz.1
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc        95 Oct 12 22:04 pilot_heartbeat.json
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc      7778 Oct 12 22:04 heartbeat.json
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc      8192 Oct 12 22:04 boinc_mmap_file
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc        28 Oct 12 22:04 wrapper_checkpoint.txt
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc      4884 Oct 12 22:05 pilotlog.txt
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc   1940662 Oct 12 22:05 log.46676269._073128.job.log.1
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc       357 Oct 12 22:05 output.list
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc       620 Oct 12 22:05 runtime_log
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc   2416640 Oct 12 22:05 result.tar.gz
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc      8703 Oct 12 22:05 runtime_log.err
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc       657 Oct 12 22:05 FMdLDmK64R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8OTMDmE6S6wn.diag
[2025-10-12 22:05:27] -rw-r--r--. 1 boinc boinc     20621 Oct 12 22:05 stderr.txt
[2025-10-12 22:05:27] HITS file was successfully produced:
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc 184251302 Oct 12 22:01 shared/HITS.pool.root.1
[2025-10-12 22:05:27]  *** Contents of shared directory: ***
[2025-10-12 22:05:27] total 399972
[2025-10-12 22:05:27] -rw-r--r--. 2 boinc boinc 222309372 Oct 12 18:00 ATLAS.root_0
[2025-10-12 22:05:27] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:00 start_atlas.sh
[2025-10-12 22:05:27] -rw-r--r--. 2 boinc boinc    569673 Oct 12 18:00 input.tar.gz
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc 184251302 Oct 12 22:01 HITS.pool.root.1
[2025-10-12 22:05:27] -rw-------. 1 boinc boinc   2416640 Oct 12 22:05 result.tar.gz
22:05:29 (20971): run_atlas exited; CPU time 53174.029673
22:05:29 (20971): called boinc_finish(0)

</stderr_txt>
]]>

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