Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:39:42 (1111031): wrapper (7.7.26015): starting
09:39:42 (1111031): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:39:42] Arguments: --nthreads 8
[2025-10-12 09:39:42] Threads: 8
[2025-10-12 09:39:42] Checking for CVMFS
[2025-10-12 09:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:39:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:39:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:39:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:39:43] 2.13.1.0 5299 5749 112748 151621 2 135 20508374 40960001 9426 16776704 0 9813276 99.836 2414463 36468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:39:43] CVMFS is ok
[2025-10-12 09:39:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:39:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:39:43] Further information can be found at the LHC@home message board.
[2025-10-12 09:39:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:39:43] Checking for apptainer binary...
[2025-10-12 09:39:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:39:43] Running /usr/bin/apptainer --version
[2025-10-12 09:39:43] apptainer version 1.4.3-1.el9
[2025-10-12 09:39:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:39:43] c-210-33-2.aglt2.org
[2025-10-12 09:39:43] apptainer works
[2025-10-12 09:39:43] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:39:43] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:39:43] Starting ATLAS job with PandaID=6839318478
[2025-10-12 09:39:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:28:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:28:17] 2025-10-12 16:27:33,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:28:17] 2025-10-12 16:27:33,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:28:17] 2025-10-12 16:27:33,247 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:28:17] 2025-10-12 16:27:33,248 | INFO     | sum of square deviations: 1392882910.8484864
[2025-10-12 12:28:17] 2025-10-12 16:27:33,248 | INFO     | sum of deviations: -26718867231.393955
[2025-10-12 12:28:17] 2025-10-12 16:27:33,248 | INFO     | mean x: 1760281425.030303
[2025-10-12 12:28:17] 2025-10-12 16:27:33,249 | INFO     | mean y: 2557183.0787878786
[2025-10-12 12:28:17] 2025-10-12 16:27:33,249 | INFO     | -- intersect: 33769017607.68349
[2025-10-12 12:28:17] 2025-10-12 16:27:33,249 | INFO     | intersect: 33769017607.68349
[2025-10-12 12:28:17] 2025-10-12 16:27:33,249 | INFO     | chi2: 2.2461893930435735
[2025-10-12 12:28:17] 2025-10-12 16:27:33,249 | INFO     | sum of square deviations: 1270054225.84375
[2025-10-12 12:28:17] 2025-10-12 16:27:33,250 | INFO     | sum of deviations: -15326604096.625
[2025-10-12 12:28:17] 2025-10-12 16:27:33,250 | INFO     | mean x: 1760281272.53125
[2025-10-12 12:28:17] 2025-10-12 16:27:33,250 | INFO     | mean y: 2571005.125
[2025-10-12 12:28:17] 2025-10-12 16:27:33,250 | INFO     | -- intersect: 21245076729.529297
[2025-10-12 12:28:17] 2025-10-12 16:27:33,250 | INFO     | intersect: 21245076729.529297
[2025-10-12 12:28:17] 2025-10-12 16:27:33,250 | INFO     | chi2: 1.54663078930968
[2025-10-12 12:28:17] 2025-10-12 16:27:33,251 | INFO     | current chi2=1.54663078930968 (change=31.14423947955678 %)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,251 | INFO     | sum of square deviations: 1154667540.8387098
[2025-10-12 12:28:17] 2025-10-12 16:27:33,251 | INFO     | sum of deviations: -14621926760.645155
[2025-10-12 12:28:17] 2025-10-12 16:27:33,251 | INFO     | mean x: 1760281120.032258
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | mean y: 2571938.729032258
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | -- intersect: 22293578401.561108
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | intersect: 22293578401.561108
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | chi2: 1.5438591759912084
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | current chi2=1.5438591759912084 (change=0.17920329387136538 %)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | right removable region: 154
[2025-10-12 12:28:17] 2025-10-12 16:27:33,252 | INFO     | sum of square deviations: 1270051175.84375
[2025-10-12 12:28:17] 2025-10-12 16:27:33,253 | INFO     | sum of deviations: -47076889926.65625
[2025-10-12 12:28:17] 2025-10-12 16:27:33,253 | INFO     | mean x: 1760281577.53125
[2025-10-12 12:28:17] 2025-10-12 16:27:33,253 | INFO     | mean y: 2582003.63125
[2025-10-12 12:28:17] 2025-10-12 16:27:33,253 | INFO     | -- intersect: 65250804785.1316
[2025-10-12 12:28:17] 2025-10-12 16:27:33,253 | INFO     | intersect: 65250804785.1316
[2025-10-12 12:28:17] 2025-10-12 16:27:33,253 | INFO     | chi2: 0.982410489605015
[2025-10-12 12:28:17] 2025-10-12 16:27:33,254 | INFO     | current chi2=0.982410489605015 (change=56.2632388592195 %)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,254 | INFO     | sum of square deviations: 1154661440.8387098
[2025-10-12 12:28:17] 2025-10-12 16:27:33,254 | INFO     | sum of deviations: -39205224378.806465
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | mean x: 1760281730.032258
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | mean y: 2571584.7612903225
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | -- intersect: 59770948491.588615
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | intersect: 59770948491.588615
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | chi2: 0.9610029748387514
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | current chi2=0.9610029748387514 (change=2.1790804345819446 %)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | left removable region: 20
[2025-10-12 12:28:17] 2025-10-12 16:27:33,255 | INFO     | sum of square deviations: 746049433.3134332
[2025-10-12 12:28:17] 2025-10-12 16:27:33,256 | INFO     | sum of deviations: -11094247310.701492
[2025-10-12 12:28:17] 2025-10-12 16:27:33,256 | INFO     | mean x: 1760281699.5373135
[2025-10-12 12:28:17] 2025-10-12 16:27:33,256 | INFO     | mean y: 2561816.9402985075
[2025-10-12 12:28:17] 2025-10-12 16:27:33,256 | INFO     | -- intersect: 26179112108.56728
[2025-10-12 12:28:17] 2025-10-12 16:27:33,256 | INFO     | intersect: 26179112108.56728
[2025-10-12 12:28:17] 2025-10-12 16:27:33,256 | INFO     | chi2: 0.12596992642802657
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | -- intersect: 26179112108.56728
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | current memory leak: -14.87 B/s (using 134 data points, chi2=0.13)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | could have reported an average CPU frequency of 2640 MHz (9 samples)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | ..............................
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | . Timing measurements:
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | . get job = 0 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,257 | INFO     | . initial setup = 2 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,258 | INFO     | . payload setup = 6 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,258 | INFO     | . stage-in = 0 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,258 | INFO     | . payload execution = 10014 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,258 | INFO     | . stage-out = 1 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,258 | INFO     | . log creation = 0 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,258 | INFO     | ..............................
[2025-10-12 12:28:17] 2025-10-12 16:27:33,349 | INFO     | 
[2025-10-12 12:28:17] 2025-10-12 16:27:33,349 | INFO     | job summary report
[2025-10-12 12:28:17] 2025-10-12 16:27:33,349 | INFO     | --------------------------------------------------
[2025-10-12 12:28:17] 2025-10-12 16:27:33,349 | INFO     | PanDA job id: 6839318478
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | task id: 46676269
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | errors: (none)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | pilot state: finished 
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | transexitcode: 0
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | exeerrorcode: 0
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | exeerrordiag: 
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | exitcode: 0
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | exitmsg: OK
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | cpuconsumptiontime: 41860 s
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | nevents: 400
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | neventsw: 0
[2025-10-12 12:28:17] 2025-10-12 16:27:33,350 | INFO     | pid: 1122455
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | pgrp: 1122455
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | corecount: 8
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | event service: False
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | sizes: {0: 2348692, 1: 2348834, 5: 2349096, 11: 2349152, 10024: 2377772, 10025: 2386770, 10028: 2386954, 10042: 2387212}
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | --------------------------------------------------
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | 
[2025-10-12 12:28:17] 2025-10-12 16:27:33,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:28:17] 2025-10-12 16:27:33,379 | INFO     | job 6839318478 has completed (purged errors)
[2025-10-12 12:28:17] 2025-10-12 16:27:33,379 | INFO     | overall cleanup function is called
[2025-10-12 12:28:17] 2025-10-12 16:27:34,387 | INFO     | --- collectZombieJob: --- 10, [1122455]
[2025-10-12 12:28:17] 2025-10-12 16:27:34,387 | INFO     | zombie collector waiting for pid 1122455
[2025-10-12 12:28:17] 2025-10-12 16:27:34,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:28:17] 2025-10-12 16:27:34,393 | INFO     | collected zombie processes
[2025-10-12 12:28:17] 2025-10-12 16:27:34,393 | INFO     | will attempt to kill all subprocesses of pid=1122455
[2025-10-12 12:28:17] 2025-10-12 16:27:34,736 | INFO     | process IDs to be killed: [1122455] (in reverse order)
[2025-10-12 12:28:17] 2025-10-12 16:27:34,878 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:28:17] 2025-10-12 16:27:34,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:28:17] 2025-10-12 16:27:34,888 | INFO     | did not find any defunct processes belonging to 1122455
[2025-10-12 12:28:18] 2025-10-12 16:27:35,053 | INFO     | did not find any defunct processes belonging to 1122455
[2025-10-12 12:28:18] 2025-10-12 16:27:35,054 | INFO     | ready for new job
[2025-10-12 12:28:18] 2025-10-12 16:27:35,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:28:18] 2025-10-12 16:27:35,056 | INFO     | ***************************************
[2025-10-12 12:28:18] 2025-10-12 16:27:35,056 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:28:18] 2025-10-12 16:27:35,056 | INFO     | ***************************************
[2025-10-12 12:28:18] 2025-10-12 16:27:35,056 | INFO     | 
[2025-10-12 12:28:18] 2025-10-12 16:27:35,065 | INFO     | architecture information:
[2025-10-12 12:28:18] 2025-10-12 16:27:35,081 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:28:18] 2025-10-12 16:27:35,138 | INFO     | cat /etc/os-release:
[2025-10-12 12:28:18] NAME="CentOS Linux"
[2025-10-12 12:28:18] VERSION="7 (Core)"
[2025-10-12 12:28:18] ID="centos"
[2025-10-12 12:28:18] ID_LIKE="rhel fedora"
[2025-10-12 12:28:18] VERSION_ID="7"
[2025-10-12 12:28:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:28:18] ANSI_COLOR="0;31"
[2025-10-12 12:28:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:28:18] HOME_URL="https://www.centos.org/"
[2025-10-12 12:28:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:28:18] 
[2025-10-12 12:28:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:28:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:28:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:28:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:28:18] 
[2025-10-12 12:28:18] 2025-10-12 16:27:35,139 | INFO     | ***************************************
[2025-10-12 12:28:18] 2025-10-12 16:27:35,642 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 12:28:18] 2025-10-12 16:27:35,776 | INFO     | sufficient remaining disk space (73910976512 B)
[2025-10-12 12:28:18] 2025-10-12 16:27:35,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:28:18] 2025-10-12 16:27:35,776 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:28:18] 2025-10-12 16:27:35,776 | INFO     | update_server=False
[2025-10-12 12:28:18] 2025-10-12 16:27:35,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:28:18] 2025-10-12 16:27:36,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:28:18] 2025-10-12 16:27:36,393 | INFO     | aborting loop
[2025-10-12 12:28:18] 2025-10-12 16:27:36,782 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:36,801 | INFO     | all data control threads have been joined
[2025-10-12 12:28:18] 2025-10-12 16:27:36,946 | INFO     | all job control threads have been joined
[2025-10-12 12:28:18] 2025-10-12 16:27:36,948 | INFO     | all payload control threads have been joined
[2025-10-12 12:28:18] 2025-10-12 16:27:37,141 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,178 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,184 | INFO     | [job] validate thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:28:18] 2025-10-12 16:27:37,268 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,309 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,398 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,807 | INFO     | [data] control thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,952 | INFO     | [job] control thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:37,954 | INFO     | [payload] control thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:38,055 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:38,208 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:38,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:28:18] 2025-10-12 16:27:39,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:28:18] 2025-10-12 16:27:39,217 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:39,368 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:43,047 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:27:45,907 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:28:18] 2025-10-12 16:27:46,913 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:28:18] 2025-10-12 16:28:06,227 | INFO     | PID=1114696 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:28:18] 2025-10-12 16:28:06,228 | INFO     | .. there are 10 such processes running
[2025-10-12 12:28:18] 2025-10-12 16:28:06,228 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:28:18] 2025-10-12 16:28:06,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:28:18] 2025-10-12 16:28:06,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:28:18] 2025-10-12 16:28:11,998 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:28:18] 2025-10-12 16:28:12,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237441972032)>', '<ExcThread(monitor, started 140237074306816)>']
[2025-10-12 12:28:18] 2025-10-12 16:28:13,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:28:18] 2025-10-12 16:28:13,288 | INFO     | [monitor] control thread has ended
[2025-10-12 12:28:18] 2025-10-12 16:28:17,383 | INFO     | all workflow threads have been joined
[2025-10-12 12:28:18] 2025-10-12 16:28:17,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:28:18] 2025-10-12 16:28:17,383 | INFO     | traces error code: 0
[2025-10-12 12:28:18] 2025-10-12 16:28:17,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:28:18] 2025-10-12 16:28:17,560 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:28:18] 2025-10-12 16:28:17,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:28:18] 2025-10-12 16:28:17,566 [wrapper] pilotpid: 1114696
[2025-10-12 12:28:18] 2025-10-12 16:28:17,569 [wrapper] Pilot exit status: 0
[2025-10-12 12:28:18] 2025-10-12 16:28:17,582 [wrapper] pandaids: 6839318478
[2025-10-12 12:28:18] 2025-10-12 16:28:17,638 [wrapper] cleanup supervisor_pilot 1402069 1114697
[2025-10-12 12:28:18] 2025-10-12 16:28:17,659 [wrapper] Test setup, not cleaning
[2025-10-12 12:28:18] 2025-10-12 16:28:17,672 [wrapper] apfmon messages muted
[2025-10-12 12:28:18] 2025-10-12 16:28:17,677 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:28:18] 2025-10-12 16:28:17,682 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:28:18]  *** Error codes and diagnostics ***
[2025-10-12 12:28:18]     "exeErrorCode": 0,
[2025-10-12 12:28:18]     "exeErrorDiag": "",
[2025-10-12 12:28:18]     "pilotErrorCode": 0,
[2025-10-12 12:28:18]     "pilotErrorDiag": "",
[2025-10-12 12:28:18]  *** Listing of results directory ***
[2025-10-12 12:28:18] total 404608
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:00 queuedata.json
[2025-10-12 12:28:18] -rwx------. 1 boincer umatlas     36292 Oct 11 23:00 runpilot2-wrapper.sh
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:28:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 09:39 run_atlas
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 09:39 job.xml
[2025-10-12 12:28:18] -rw-r--r--. 2 boincer umatlas 218042167 Oct 12 09:39 EVNT.46676267._003208.pool.root.1
[2025-10-12 12:28:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:39 start_atlas.sh
[2025-10-12 12:28:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 09:39 shared
[2025-10-12 12:28:18] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 09:39 input.tar.gz
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 09:39 boinc_lockfile
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 09:39 pandaJob.out
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas    975528 Oct 12 09:39 agis_schedconf.cvmfs.json
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:28:18] drwx------. 5 boincer umatlas      4096 Oct 12 09:39 pilot3
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas      6838 Oct 12 12:21 init_data.xml
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas 188774020 Oct 12 12:26 HITS.46676269._069899.pool.root.1
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas       529 Oct 12 12:26 boinc_task_state.xml
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas      1045 Oct 12 12:27 memory_monitor_summary.json
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas    409302 Oct 12 12:27 log.46676269._069899.job.log.tgz.1
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas      7829 Oct 12 12:27 heartbeat.json
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas        27 Oct 12 12:27 wrapper_checkpoint.txt
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:27 boinc_mmap_file
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas        95 Oct 12 12:28 pilot_heartbeat.json
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas      4896 Oct 12 12:28 pilotlog.txt
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas   1390334 Oct 12 12:28 log.46676269._069899.job.log.1
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas       357 Oct 12 12:28 output.list
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:28 runtime_log
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas   1822720 Oct 12 12:28 result.tar.gz
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 12:28 runtime_log.err
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas       656 Oct 12 12:28 qKpMDmIV1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWQiNDmgKeAYo.diag
[2025-10-12 12:28:18] -rw-r--r--. 1 boincer umatlas     20950 Oct 12 12:28 stderr.txt
[2025-10-12 12:28:18] HITS file was successfully produced:
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas 188774020 Oct 12 12:26 shared/HITS.pool.root.1
[2025-10-12 12:28:18]  *** Contents of shared directory: ***
[2025-10-12 12:28:18] total 399644
[2025-10-12 12:28:18] -rw-r--r--. 2 boincer umatlas 218042167 Oct 12 09:39 ATLAS.root_0
[2025-10-12 12:28:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:39 start_atlas.sh
[2025-10-12 12:28:18] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 09:39 input.tar.gz
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas 188774020 Oct 12 12:26 HITS.pool.root.1
[2025-10-12 12:28:18] -rw-------. 1 boincer umatlas   1822720 Oct 12 12:28 result.tar.gz
12:28:19 (1111031): run_atlas exited; CPU time 42073.683765
12:28:19 (1111031): called boinc_finish(0)

</stderr_txt>
]]>

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