Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:36:04 (521604): wrapper (7.7.26015): starting
04:36:04 (521604): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:36:04] Arguments: --nthreads 8
[2025-10-12 04:36:04] Threads: 8
[2025-10-12 04:36:04] Checking for CVMFS
[2025-10-12 04:36:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:36:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:36:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:36:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:36:05] 2.11.3.0 4007 31439 211604 151619 3 315 32065666 45568001 13783 130560 0 175082941 99.849 76254185 25955 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 04:36:05] CVMFS is ok
[2025-10-12 04:36:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:36:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:36:05] Further information can be found at the LHC@home message board.
[2025-10-12 04:36:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:36:05] Checking for apptainer binary...
[2025-10-12 04:36:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:36:05] Running /usr/bin/apptainer --version
[2025-10-12 04:36:05] apptainer version 1.4.1-1.el9
[2025-10-12 04:36:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:36:05] wns0017.triumf.lcg
[2025-10-12 04:36:05] apptainer works
[2025-10-12 04:36:05] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:36:05] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:36:05] Starting ATLAS job with PandaID=6839822011
[2025-10-12 04:36:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:41:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | wrong length of table data, x=[1760269058.0], y=[2310.0] (must be same and length>=4)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | ..............................
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . Timing measurements:
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . get job = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . initial setup = 4 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . payload setup = 15 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . stage-in = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . payload execution = 52 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . stage-out = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . log creation = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | ..............................
[2025-10-12 04:41:41] 2025-10-12 11:40:41,327 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 04:41:41] 2025-10-12 11:40:41,330 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839822011/pilotlog.txt
[2025-10-12 04:41:41] 2025-10-12 11:40:41,412 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 04:41:41] - Log from pilotlog.txt -
[2025-10-12 04:41:41] 2025-10-12 11:40:41,323 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839822011/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,324 | INFO     | extracted standard info from prmon json
[2025-10-12 04:41:41] 2025-10-12 11:40:41,324 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:41:41] 2025-10-12 11:40:41,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | wrong length of table data, x=[1760269058.0], y=[2310.0] (must be same and length>=4)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | ..............................
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . Timing measurements:
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . get job = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . initial setup = 4 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . payload setup = 15 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . stage-in = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . payload execution = 52 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . stage-out = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . log creation = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | ..............................
[2025-10-12 04:41:41] 2025-10-12 11:40:41,327 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 04:41:41] 2025-10-12 11:40:41,330 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839822011/pilotlog.txt
[2025-10-12 04:41:41] 2025-10-12 11:40:41,412 | WARNING  | 
[2025-10-12 04:41:41] [begin log extracts]
[2025-10-12 04:41:41] - Log from pilotlog.txt -
[2025-10-12 04:41:41] 2025-10-12 11:40:41,323 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839822011/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,324 | INFO     | extracted standard info from prmon json
[2025-10-12 04:41:41] 2025-10-12 11:40:41,324 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 04:41:41] 2025-10-12 11:40:41,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:41:41] 2025-10-12 11:40:41,325 | WARNING  | wrong length of table data, x=[1760269058.0], y=[2310.0] (must be same and length>=4)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | ..............................
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . Timing measurements:
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . get job = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . initial setup = 4 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . payload setup = 15 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . stage-in = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . payload execution = 52 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . stage-out = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | . log creation = 0 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,326 | INFO     | ..............................
[2025-10-12 04:41:41] 2025-10-12 11:40:41,327 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 04:41:41] 2025-10-12 11:40:41,330 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839822011/pilotlog.txt
[2025-10-12 04:41:41] [end log extracts]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,413 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,415 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 04:41:41] 2025-10-12 11:40:41,863 | INFO     | 
[2025-10-12 04:41:41] 2025-10-12 11:40:41,863 | INFO     | job summary report
[2025-10-12 04:41:41] 2025-10-12 11:40:41,863 | INFO     | --------------------------------------------------
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | PanDA job id: 6839822011
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | task id: 46676269
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 04:38:12,475 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | pilot state: failed 
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | transexitcode: 65
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | exeerrorcode: 65
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | exitcode: 65
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | cpuconsumptiontime: 20 s
[2025-10-12 04:41:41] 2025-10-12 11:40:41,864 | INFO     | nevents: 0
[2025-10-12 04:41:41] 2025-10-12 11:40:41,865 | INFO     | neventsw: 0
[2025-10-12 04:41:41] 2025-10-12 11:40:41,865 | INFO     | pid: 539108
[2025-10-12 04:41:41] 2025-10-12 11:40:41,865 | INFO     | pgrp: 539108
[2025-10-12 04:41:41] 2025-10-12 11:40:41,873 | INFO     | corecount: 8
[2025-10-12 04:41:41] 2025-10-12 11:40:41,873 | INFO     | event service: False
[2025-10-12 04:41:41] 2025-10-12 11:40:41,873 | INFO     | sizes: {0: 2348627, 1: 2348882, 2: 2348882, 12: 2348910, 15: 2349200, 23: 2349228, 73: 2372689, 74: 2376985, 213: 2377123}
[2025-10-12 04:41:41] 2025-10-12 11:40:41,873 | INFO     | --------------------------------------------------
[2025-10-12 04:41:41] 2025-10-12 11:40:41,873 | INFO     | 
[2025-10-12 04:41:41] 2025-10-12 11:40:41,873 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 04:41:41] 2025-10-12 11:40:41,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | job 6839822011 has completed (purged errors)
[2025-10-12 04:41:41] 2025-10-12 11:40:41,976 | INFO     | overall cleanup function is called
[2025-10-12 04:41:41] 2025-10-12 11:40:42,015 | INFO     | PID=530215 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 04:41:41] 2025-10-12 11:40:42,015 | INFO     | .. there are 26 such processes running
[2025-10-12 04:41:41] 2025-10-12 11:40:42,983 | INFO     | --- collectZombieJob: --- 10, [539108]
[2025-10-12 04:41:41] 2025-10-12 11:40:42,983 | INFO     | zombie collector waiting for pid 539108
[2025-10-12 04:41:41] 2025-10-12 11:40:42,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:41:41] 2025-10-12 11:40:42,983 | INFO     | collected zombie processes
[2025-10-12 04:41:41] 2025-10-12 11:40:42,984 | INFO     | will attempt to kill all subprocesses of pid=539108
[2025-10-12 04:41:41] 2025-10-12 11:40:43,653 | INFO     | process IDs to be killed: [539108] (in reverse order)
[2025-10-12 04:41:41] 2025-10-12 11:40:43,820 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:41:41] 2025-10-12 11:40:43,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:41:41] 2025-10-12 11:40:43,846 | INFO     | did not find any defunct processes belonging to 539108
[2025-10-12 04:41:41] 2025-10-12 11:40:43,859 | INFO     | did not find any defunct processes belonging to 539108
[2025-10-12 04:41:41] 2025-10-12 11:40:43,860 | INFO     | ready for new job
[2025-10-12 04:41:41] 2025-10-12 11:40:43,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:41:41] 2025-10-12 11:40:43,861 | INFO     | ***************************************
[2025-10-12 04:41:41] 2025-10-12 11:40:43,861 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:41:41] 2025-10-12 11:40:43,861 | INFO     | ***************************************
[2025-10-12 04:41:41] 2025-10-12 11:40:43,861 | INFO     | 
[2025-10-12 04:41:41] 2025-10-12 11:40:43,863 | INFO     | architecture information:
[2025-10-12 04:41:41] 2025-10-12 11:40:43,864 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:41:41] 2025-10-12 11:40:43,906 | INFO     | cat /etc/os-release:
[2025-10-12 04:41:41] NAME="CentOS Linux"
[2025-10-12 04:41:41] VERSION="7 (Core)"
[2025-10-12 04:41:41] ID="centos"
[2025-10-12 04:41:41] ID_LIKE="rhel fedora"
[2025-10-12 04:41:41] VERSION_ID="7"
[2025-10-12 04:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:41:41] ANSI_COLOR="0;31"
[2025-10-12 04:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:41:41] HOME_URL="https://www.centos.org/"
[2025-10-12 04:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:41:41] 
[2025-10-12 04:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:41:41] 
[2025-10-12 04:41:41] 2025-10-12 11:40:43,906 | INFO     | ***************************************
[2025-10-12 04:41:41] 2025-10-12 11:40:44,410 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 04:41:41] 2025-10-12 11:40:44,506 | INFO     | sufficient remaining disk space (1265069195264 B)
[2025-10-12 04:41:41] 2025-10-12 11:40:44,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:41:41] 2025-10-12 11:40:44,511 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:41:41] 2025-10-12 11:40:44,511 | INFO     | update_server=False
[2025-10-12 04:41:41] 2025-10-12 11:40:44,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:41:41] 2025-10-12 11:40:44,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:41:41] 2025-10-12 11:40:44,512 | INFO     | aborting loop
[2025-10-12 04:41:41] 2025-10-12 11:40:44,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:41:41] 2025-10-12 11:40:44,906 | INFO     | all job control threads have been joined
[2025-10-12 04:41:41] 2025-10-12 11:40:44,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:41:41] 2025-10-12 11:40:45,134 | INFO     | all data control threads have been joined
[2025-10-12 04:41:41] 2025-10-12 11:40:45,517 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:45,518 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:45,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:45,912 | INFO     | [job] control thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:45,917 | INFO     | all payload control threads have been joined
[2025-10-12 04:41:41] 2025-10-12 11:40:46,039 | INFO     | [job] validate thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,073 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,122 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,140 | INFO     | [data] control thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,353 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,527 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:41:41] 2025-10-12 11:40:46,738 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,819 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:46,923 | INFO     | [payload] control thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:47,005 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:47,726 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:40:48,958 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:41:41] 2025-10-12 11:41:15,250 | INFO     | PID=530215 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 04:41:41] 2025-10-12 11:41:15,250 | INFO     | .. there are 26 such processes running
[2025-10-12 04:41:41] 2025-10-12 11:41:15,251 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:41:41] 2025-10-12 11:41:15,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:41:41] 2025-10-12 11:41:15,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:41:41] 2025-10-12 11:41:33,025 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:41:41] 2025-10-12 11:41:34,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141360502592)>', '<ExcThread(monitor, started 140140529829632)>']
[2025-10-12 04:41:41] 2025-10-12 11:41:35,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:41:41] 2025-10-12 11:41:35,381 | INFO     | [monitor] control thread has ended
[2025-10-12 04:41:41] 2025-10-12 11:41:39,990 | INFO     | all workflow threads have been joined
[2025-10-12 04:41:41] 2025-10-12 11:41:39,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:41:41] 2025-10-12 11:41:39,991 | INFO     | traces error code: 0
[2025-10-12 04:41:41] 2025-10-12 11:41:39,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:41:41] 2025-10-12 11:41:40,605 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:41:41] 2025-10-12 11:41:40,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:41:41] 2025-10-12 11:41:40,669 [wrapper] pilotpid: 530215
[2025-10-12 04:41:41] 2025-10-12 11:41:40,712 [wrapper] Pilot exit status: 0
[2025-10-12 04:41:41] 2025-10-12 11:41:40,861 [wrapper] pandaids: 6839822011
[2025-10-12 04:41:41] 2025-10-12 11:41:40,963 [wrapper] cleanup supervisor_pilot  530226 530216
[2025-10-12 04:41:41] 2025-10-12 11:41:41,023 [wrapper] Test setup, not cleaning
[2025-10-12 04:41:41] 2025-10-12 11:41:41,050 [wrapper] apfmon messages muted
[2025-10-12 04:41:41] 2025-10-12 11:41:41,075 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:41:41] 2025-10-12 11:41:41,102 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:41:41]  *** Error codes and diagnostics ***
[2025-10-12 04:41:41]     "exeErrorCode": 65,
[2025-10-12 04:41:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 04:41:41]     "pilotErrorCode": 1305,
[2025-10-12 04:41:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 04:41:41]  *** Listing of results directory ***
[2025-10-12 04:41:41] total 220188
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc    557409 Oct 12 02:04 pilot3.tar.gz
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc      5112 Oct 12 02:31 queuedata.json
[2025-10-12 04:41:41] -rwx------. 1 boinc boinc     36292 Oct 12 02:33 runpilot2-wrapper.sh
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc       100 Oct 12 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:41:41] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 04:36 run_atlas
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc       105 Oct 12 04:36 job.xml
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc      6444 Oct 12 04:36 init_data.xml
[2025-10-12 04:41:41] -rw-r--r--. 2 boinc boinc 221338672 Oct 12 04:36 EVNT.46676267._003573.pool.root.1
[2025-10-12 04:41:41] -rw-r--r--. 2 boinc boinc     15120 Oct 12 04:36 start_atlas.sh
[2025-10-12 04:41:41] drwxrwx--x. 2 boinc boinc      4096 Oct 12 04:36 shared
[2025-10-12 04:41:41] -rw-r--r--. 2 boinc boinc    569683 Oct 12 04:36 input.tar.gz
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc         0 Oct 12 04:36 boinc_lockfile
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc      2550 Oct 12 04:36 pandaJob.out
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc    975520 Oct 12 04:36 agis_schedconf.cvmfs.json
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc   1560580 Oct 12 04:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:41:41] drwx------. 5 boinc boinc      4096 Oct 12 04:36 pilot3
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc       524 Oct 12 04:38 boinc_task_state.xml
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc       988 Oct 12 04:38 memory_monitor_summary.json
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc     22094 Oct 12 04:38 log.46676269._075332.job.log.tgz.1
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc        95 Oct 12 04:40 pilot_heartbeat.json
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc      8420 Oct 12 04:40 heartbeat.json
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc      8192 Oct 12 04:41 boinc_mmap_file
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc        23 Oct 12 04:41 wrapper_checkpoint.txt
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc      4822 Oct 12 04:41 pilotlog.txt
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc     93177 Oct 12 04:41 log.46676269._075332.job.log.1
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc       188 Oct 12 04:41 output.list
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc       620 Oct 12 04:41 runtime_log
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc    133120 Oct 12 04:41 result.tar.gz
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc      8526 Oct 12 04:41 runtime_log.err
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc       644 Oct 12 04:41 3SGMDmpd7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeLjNDmhKD4ym.diag
[2025-10-12 04:41:41] -rw-r--r--. 1 boinc boinc     21904 Oct 12 04:41 stderr.txt
[2025-10-12 04:41:41] No HITS result produced
[2025-10-12 04:41:41]  *** Contents of shared directory: ***
[2025-10-12 04:41:41] total 216864
[2025-10-12 04:41:41] -rw-r--r--. 2 boinc boinc 221338672 Oct 12 04:36 ATLAS.root_0
[2025-10-12 04:41:41] -rw-r--r--. 2 boinc boinc     15120 Oct 12 04:36 start_atlas.sh
[2025-10-12 04:41:41] -rw-r--r--. 2 boinc boinc    569683 Oct 12 04:36 input.tar.gz
[2025-10-12 04:41:41] -rw-------. 1 boinc boinc    133120 Oct 12 04:41 result.tar.gz
04:41:43 (521604): run_atlas exited; CPU time 28.745464
04:41:43 (521604): called boinc_finish(0)

</stderr_txt>
]]>

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