Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:16:46 (3878504): wrapper (7.7.26015): starting
00:16:46 (3878504): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 00:16:46] Arguments: --nthreads 6
[2025-10-13 00:16:46] Threads: 6
[2025-10-13 00:16:46] Checking for CVMFS
[2025-10-13 00:16:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:16:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:16:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:16:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:16:47] 2.11.5.0 3651556 4467 72908 151624 0 57 38731992 52428800 1858 130560 0 13962951 99.998 152683 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 00:16:47] CVMFS is ok
[2025-10-13 00:16:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:16:47] Checking for apptainer binary...
[2025-10-13 00:16:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:16:47] Running /usr/bin/apptainer --version
[2025-10-13 00:16:47] apptainer version 1.3.5-1.el9
[2025-10-13 00:16:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:16:47] testio008
[2025-10-13 00:16:47] apptainer works
[2025-10-13 00:16:47] Set ATHENA_PROC_NUMBER=6
[2025-10-13 00:16:47] Set ATHENA_CORE_NUMBER=6
[2025-10-13 00:16:47] Starting ATLAS job with PandaID=6839162786
[2025-10-13 00:16:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:30:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:30:17] 2025-10-12 16:29:21,020 | INFO     | monitor loop #337: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:21,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:22,238 | INFO     | time since job start (4338s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:23,523 | INFO     | monitor loop #338: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:23,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:24,243 | INFO     | time since job start (4340s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:26,026 | INFO     | monitor loop #339: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:26,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:26,248 | INFO     | time since job start (4342s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:28,253 | INFO     | time since job start (4344s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:28,529 | INFO     | monitor loop #340: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:28,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:29,352 | INFO     | PID=3882276 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:30:17] 2025-10-12 16:29:29,352 | INFO     | .. there are 3 such processes running
[2025-10-13 01:30:17] 2025-10-12 16:29:30,353 | INFO     | time since job start (4346s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:31,033 | INFO     | monitor loop #341: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:31,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:32,359 | INFO     | time since job start (4348s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:33,535 | INFO     | monitor loop #342: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:33,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:34,364 | INFO     | time since job start (4350s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:36,038 | INFO     | monitor loop #343: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:36,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:36,365 | INFO     | time since job start (4352s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:38,371 | INFO     | time since job start (4354s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:38,371 | INFO     | 4360s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 01:30:17] 2025-10-12 16:29:38,541 | INFO     | monitor loop #344: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:38,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:40,376 | INFO     | time since job start (4356s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:41,044 | INFO     | monitor loop #345: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:41,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:42,382 | INFO     | time since job start (4358s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:43,547 | INFO     | monitor loop #346: job 0:6839162786 is in state 'finished'
[2025-10-13 01:30:17] 2025-10-12 16:29:43,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:30:17] 2025-10-12 16:29:44,387 | INFO     | time since job start (4360s) is within the limit (172800.0s)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:30:17] 2025-10-12 16:29:45,120 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4091.6333999999997
[2025-10-13 01:30:17] 2025-10-12 16:29:45,121 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6839162786/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,121 | INFO     | extracted standard info from prmon json
[2025-10-13 01:30:17] 2025-10-12 16:29:45,121 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:30:17] 2025-10-12 16:29:45,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:30:17] 2025-10-12 16:29:45,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:30:17] 2025-10-12 16:29:45,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:30:17] 2025-10-12 16:29:45,122 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:30:17] 2025-10-12 16:29:45,122 | INFO     | sum of square deviations: 77515872.0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,122 | INFO     | sum of deviations: -4558168209.0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,122 | INFO     | mean x: 1760284442.0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | mean y: 2679839.4603174604
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | -- intersect: 103512740105.84943
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | intersect: 103512740105.84943
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | chi2: 0.02693431930871483
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | -- intersect: 103512740105.84943
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | current memory leak: -58.80 B/s (using 63 data points, chi2=0.03)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | could have reported an average CPU frequency of 3356 MHz (6 samples)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | ..............................
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . Timing measurements:
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . get job = 0 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . initial setup = 6 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . payload setup = 3 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . stage-in = 0 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . payload execution = 4258 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . stage-out = 0 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | . log creation = 0 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,123 | INFO     | ..............................
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | 
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | job summary report
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | --------------------------------------------------
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | PanDA job id: 6839162786
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | task id: 46676269
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | errors: (none)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | pilot state: finished 
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | transexitcode: 0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | exeerrorcode: 0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | exeerrordiag: 
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | exitcode: 0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | exitmsg: OK
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | cpuconsumptiontime: 22796 s
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | nevents: 400
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | neventsw: 0
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | pid: 3889002
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | pgrp: 3889002
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | corecount: 6
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | event service: False
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | sizes: {0: 2348806, 3: 2349068, 11: 2349096, 4266: 2375052, 4267: 2384050, 4268: 2384134, 4346: 2384456}
[2025-10-13 01:30:17] 2025-10-12 16:29:45,160 | INFO     | --------------------------------------------------
[2025-10-13 01:30:17] 2025-10-12 16:29:45,161 | INFO     | 
[2025-10-13 01:30:17] 2025-10-12 16:29:45,161 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 01:30:17] 2025-10-12 16:29:45,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | job 6839162786 has completed (purged errors)
[2025-10-13 01:30:17] 2025-10-12 16:29:45,169 | INFO     | overall cleanup function is called
[2025-10-13 01:30:17] 2025-10-12 16:29:46,173 | INFO     | --- collectZombieJob: --- 10, [3889002]
[2025-10-13 01:30:17] 2025-10-12 16:29:46,173 | INFO     | zombie collector waiting for pid 3889002
[2025-10-13 01:30:17] 2025-10-12 16:29:46,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:30:17] 2025-10-12 16:29:46,173 | INFO     | collected zombie processes
[2025-10-13 01:30:17] 2025-10-12 16:29:46,173 | INFO     | will attempt to kill all subprocesses of pid=3889002
[2025-10-13 01:30:17] 2025-10-12 16:29:46,210 | INFO     | process IDs to be killed: [3889002] (in reverse order)
[2025-10-13 01:30:17] 2025-10-12 16:29:46,231 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:30:17] 2025-10-12 16:29:46,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:30:17] 2025-10-12 16:29:46,233 | INFO     | did not find any defunct processes belonging to 3889002
[2025-10-13 01:30:17] 2025-10-12 16:29:46,234 | INFO     | did not find any defunct processes belonging to 3889002
[2025-10-13 01:30:17] 2025-10-12 16:29:46,234 | INFO     | ready for new job
[2025-10-13 01:30:17] 2025-10-12 16:29:46,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:30:17] 2025-10-12 16:29:46,235 | INFO     | ***************************************
[2025-10-13 01:30:17] 2025-10-12 16:29:46,235 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:30:17] 2025-10-12 16:29:46,235 | INFO     | ***************************************
[2025-10-13 01:30:17] 2025-10-12 16:29:46,235 | INFO     | 
[2025-10-13 01:30:17] 2025-10-12 16:29:46,236 | INFO     | architecture information:
[2025-10-13 01:30:17] 2025-10-12 16:29:46,236 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:30:17] 2025-10-12 16:29:46,243 | INFO     | cat /etc/os-release:
[2025-10-13 01:30:17] NAME="CentOS Linux"
[2025-10-13 01:30:17] VERSION="7 (Core)"
[2025-10-13 01:30:17] ID="centos"
[2025-10-13 01:30:17] ID_LIKE="rhel fedora"
[2025-10-13 01:30:17] VERSION_ID="7"
[2025-10-13 01:30:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:30:17] ANSI_COLOR="0;31"
[2025-10-13 01:30:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:30:17] HOME_URL="https://www.centos.org/"
[2025-10-13 01:30:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:30:17] 
[2025-10-13 01:30:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:30:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:30:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:30:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:30:17] 
[2025-10-13 01:30:17] 2025-10-12 16:29:46,243 | INFO     | ***************************************
[2025-10-13 01:30:17] 2025-10-12 16:29:46,744 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | INFO     | sufficient remaining disk space (280263393280 B)
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | INFO     | update_server=False
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:30:17] 2025-10-12 16:29:46,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:30:17] 2025-10-12 16:29:47,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:30:17] 2025-10-12 16:29:47,056 | INFO     | aborting loop
[2025-10-13 01:30:17] 2025-10-12 16:29:47,296 | INFO     | all data control threads have been joined
[2025-10-13 01:30:17] 2025-10-12 16:29:47,374 | INFO     | all payload control threads have been joined
[2025-10-13 01:30:17] 2025-10-12 16:29:47,756 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:47,757 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,013 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,039 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,060 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,071 | INFO     | all job control threads have been joined
[2025-10-13 01:30:17] 2025-10-12 16:29:48,220 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,301 | INFO     | [data] control thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,379 | INFO     | [payload] control thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,551 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,757 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:48,782 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:49,076 | INFO     | [job] control thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:49,081 | INFO     | [job] validate thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:49,332 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:49,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:30:17] 2025-10-12 16:29:53,867 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:29:57,309 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:30:17] 2025-10-12 16:29:58,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:30:17] 2025-10-12 16:30:11,594 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:30:17] 2025-10-12 16:30:12,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152429598528)>', '<ExcThread(monitor, started 140151938336512)>']
[2025-10-13 01:30:17] 2025-10-12 16:30:17,471 | INFO     | PID=3882276 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:30:17] 2025-10-12 16:30:17,471 | INFO     | .. there are 3 such processes running
[2025-10-13 01:30:17] 2025-10-12 16:30:17,471 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:30:17] 2025-10-12 16:30:17,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:30:17] 2025-10-12 16:30:17,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:30:17] 2025-10-12 16:30:17,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:30:17] 2025-10-12 16:30:17,472 | INFO     | [monitor] control thread has ended
[2025-10-13 01:30:17] 2025-10-12 16:30:17,625 | INFO     | all workflow threads have been joined
[2025-10-13 01:30:17] 2025-10-12 16:30:17,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:30:17] 2025-10-12 16:30:17,626 | INFO     | traces error code: 0
[2025-10-13 01:30:17] 2025-10-12 16:30:17,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:30:17] 2025-10-12 16:30:17,682 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:30:17] 2025-10-12 16:30:17,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:30:17] 2025-10-12 16:30:17,684 [wrapper] pilotpid: 3882276
[2025-10-13 01:30:17] 2025-10-12 16:30:17,685 [wrapper] Pilot exit status: 0
[2025-10-13 01:30:17] 2025-10-12 16:30:17,688 [wrapper] pandaids: 6839162786
[2025-10-13 01:30:17] 2025-10-12 16:30:17,699 [wrapper] cleanup supervisor_pilot 3946622 3882277
[2025-10-13 01:30:17] 2025-10-12 16:30:17,701 [wrapper] Test setup, not cleaning
[2025-10-13 01:30:17] 2025-10-12 16:30:17,702 [wrapper] apfmon messages muted
[2025-10-13 01:30:17] 2025-10-12 16:30:17,703 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:30:17] 2025-10-12 16:30:17,703 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:30:17]  *** Error codes and diagnostics ***
[2025-10-13 01:30:17]     "exeErrorCode": 0,
[2025-10-13 01:30:17]     "exeErrorDiag": "",
[2025-10-13 01:30:17]     "pilotErrorCode": 0,
[2025-10-13 01:30:17]     "pilotErrorDiag": "",
[2025-10-13 01:30:17]  *** Listing of results directory ***
[2025-10-13 01:30:17] total 416428
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc    557409 Oct 12 08:21 pilot3.tar.gz
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc      5112 Oct 12 08:45 queuedata.json
[2025-10-13 01:30:17] -rwx------. 1 boinc boinc     36292 Oct 12 08:45 runpilot2-wrapper.sh
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc       100 Oct 13 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:30:17] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 00:16 run_atlas
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc       105 Oct 13 00:16 job.xml
[2025-10-13 01:30:17] -rw-r--r--. 2 boinc boinc 220697693 Oct 13 00:16 EVNT.46676267._002736.pool.root.1
[2025-10-13 01:30:17] -rw-r--r--. 2 boinc boinc     15120 Oct 13 00:16 start_atlas.sh
[2025-10-13 01:30:17] drwxrwx--x. 2 boinc boinc        68 Oct 13 00:16 shared
[2025-10-13 01:30:17] -rw-r--r--. 2 boinc boinc    569675 Oct 13 00:16 input.tar.gz
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc      9509 Oct 13 00:16 init_data.xml
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc         0 Oct 13 00:16 boinc_lockfile
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc      2549 Oct 13 00:16 pandaJob.out
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc    975528 Oct 13 00:16 agis_schedconf.cvmfs.json
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc   1560580 Oct 13 00:17 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:30:17] drwx------. 5 boinc boinc      4096 Oct 13 00:17 pilot3
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc 199955610 Oct 13 01:28 HITS.46676269._067209.pool.root.1
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc       529 Oct 13 01:28 boinc_task_state.xml
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc      1020 Oct 13 01:28 memory_monitor_summary.json
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc    288373 Oct 13 01:28 log.46676269._067209.job.log.tgz.1
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc        95 Oct 13 01:29 pilot_heartbeat.json
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc      7765 Oct 13 01:29 heartbeat.json
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc      8192 Oct 13 01:30 boinc_mmap_file
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc        27 Oct 13 01:30 wrapper_checkpoint.txt
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc      4896 Oct 13 01:30 pilotlog.txt
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc    649475 Oct 13 01:30 log.46676269._067209.job.log.1
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc       357 Oct 13 01:30 output.list
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc       620 Oct 13 01:30 runtime_log
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc    952320 Oct 13 01:30 result.tar.gz
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc      8661 Oct 13 01:30 runtime_log.err
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc       642 Oct 13 01:30 5iPODmRSyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH0hNDmzXjpBn.diag
[2025-10-13 01:30:17] -rw-r--r--. 1 boinc boinc     21957 Oct 13 01:30 stderr.txt
[2025-10-13 01:30:17] HITS file was successfully produced:
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc 199955610 Oct 13 01:28 shared/HITS.pool.root.1
[2025-10-13 01:30:17]  *** Contents of shared directory: ***
[2025-10-13 01:30:17] total 412308
[2025-10-13 01:30:17] -rw-r--r--. 2 boinc boinc 220697693 Oct 13 00:16 ATLAS.root_0
[2025-10-13 01:30:17] -rw-r--r--. 2 boinc boinc     15120 Oct 13 00:16 start_atlas.sh
[2025-10-13 01:30:17] -rw-r--r--. 2 boinc boinc    569675 Oct 13 00:16 input.tar.gz
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc 199955610 Oct 13 01:28 HITS.pool.root.1
[2025-10-13 01:30:17] -rw-------. 1 boinc boinc    952320 Oct 13 01:30 result.tar.gz
01:30:19 (3878504): run_atlas exited; CPU time 22822.758591
01:30:19 (3878504): called boinc_finish(0)

</stderr_txt>
]]>

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